RNA–Protein interactions for RNA: YJR104C

SOD1, Transcript of Cytosolic copper-zinc superoxide dismutase, yeast

Gene SOD1, Length 465 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SOD1	YJR104C	YLR177W	Q06251	628 aa		3.74	□□□□□ -1.81
SOD1	YJR104C	YLH47	Q06493	454 aa		3.74	□□□□□ -1.81
SOD1	YJR104C	NOP6	Q07623	225 aa	Known RBP	3.74	□□□□□ -1.81
SOD1	YJR104C	NSE1	Q07913	336 aa		3.74	□□□□□ -1.81
SOD1	YJR104C	MSH5	Q12175	901 aa		3.74	□□□□□ -1.81
SOD1	YJR104C	OCA6	Q12454	224 aa		3.74	□□□□□ -1.81
SOD1	YJR104C	CDC8	P00572	216 aa		3.73	□□□□□ -1.81
SOD1	YJR104C	REP1	P03871	373 aa		3.73	□□□□□ -1.81
SOD1	YJR104C	PET494	P07390	489 aa	Predicted RBP	3.73	□□□□□ -1.81
SOD1	YJR104C	YJU2	P28320	278 aa	Predicted RBP	3.73	□□□□□ -1.81
SOD1	YJR104C	RME1	P32338	300 aa	Known RBP	3.73	□□□□□ -1.81
SOD1	YJR104C	CBF2	P32504	956 aa		3.73	□□□□□ -1.81
SOD1	YJR104C	SEC6	P32844	805 aa		3.73	□□□□□ -1.81
SOD1	YJR104C	SEC8	P32855	1065 aa		3.73	□□□□□ -1.81
SOD1	YJR104C	RPT1	P33299	467 aa	Known RBP	3.73	□□□□□ -1.81
SOD1	YJR104C	YKL091C	P33324	310 aa	Known RBP	3.73	□□□□□ -1.81
SOD1	YJR104C	TFC4	P33339	1025 aa		3.73	□□□□□ -1.81
SOD1	YJR104C	COY1	P34237	679 aa		3.73	□□□□□ -1.81
SOD1	YJR104C	APN2	P38207	520 aa		3.73	□□□□□ -1.81
SOD1	YJR104C	RFS1	P38234	210 aa	Known RBP	3.73	□□□□□ -1.81
SOD1	YJR104C	FES1	P38260	290 aa		3.73	□□□□□ -1.81
SOD1	YJR104C	RAD55	P38953	406 aa		3.73	□□□□□ -1.81
SOD1	YJR104C	SAK1	P38990	1142 aa		3.73	□□□□□ -1.81
SOD1	YJR104C	CCC2	P38995	1004 aa		3.73	□□□□□ -1.81
SOD1	YJR104C	SCS2	P40075	244 aa	Known RBP	3.73	□□□□□ -1.81
SOD1	YJR104C	FYV10	P40492	516 aa		3.73	□□□□□ -1.81
SOD1	YJR104C	SDS3	P40505	327 aa		3.73	□□□□□ -1.81
SOD1	YJR104C	YFL052W	P43551	465 aa		3.73	□□□□□ -1.81
SOD1	YJR104C	LAM5	P43560	674 aa		3.73	□□□□□ -1.81
SOD1	YJR104C	CIT3	P43635	486 aa		3.73	□□□□□ -1.81
SOD1	YJR104C	NUP85	P46673	744 aa		3.73	□□□□□ -1.81
SOD1	YJR104C	TMA22	P47089	198 aa	Predicted RBP	3.73	□□□□□ -1.81
SOD1	YJR104C	ERP6	P53198	216 aa		3.73	□□□□□ -1.81
SOD1	YJR104C	SFB2	P53953	876 aa		3.73	□□□□□ -1.81
SOD1	YJR104C	CIK1	Q01649	594 aa		3.73	□□□□□ -1.81
SOD1	YJR104C	MSC2	Q03455	724 aa		3.73	□□□□□ -1.81
SOD1	YJR104C	CEF1	Q03654	590 aa	Predicted RBP	3.73	□□□□□ -1.81
SOD1	YJR104C	VPS38	Q05919	439 aa		3.73	□□□□□ -1.81
SOD1	YJR104C	YLR257W	Q06146	321 aa	Known RBP	3.73	□□□□□ -1.81
SOD1	YJR104C	MAG2	Q06436	670 aa	Known RBP	3.73	□□□□□ -1.81
SOD1	YJR104C	YPR172W	Q06608	200 aa		3.73	□□□□□ -1.81
SOD1	YJR104C	TSR2	Q06672	205 aa	Known RBP	3.73	□□□□□ -1.81
SOD1	YJR104C	OXR1	Q08952	273 aa		3.73	□□□□□ -1.81
SOD1	YJR104C	VIK1	Q12045	647 aa		3.73	□□□□□ -1.81
SOD1	YJR104C	GPR1	Q12361	961 aa		3.73	□□□□□ -1.81
SOD1	YJR104C	YOL098C	Q12496	1037 aa		3.73	□□□□□ -1.81
SOD1	YJR104C	ATG11	Q12527	1178 aa		3.73	□□□□□ -1.81
SOD1	YJR104C	YBR056W-A	I2HB52	66 aa		3.72	□□□□□ -1.81
SOD1	YJR104C	CPA2	P03965	1118 aa	Known RBP	3.72	□□□□□ -1.81
SOD1	YJR104C	RPB2	P08518	1224 aa	Known RBP	3.72	□□□□□ -1.81
SOD1	YJR104C	SSC1	P0CS90	654 aa	Known RBP	3.72	□□□□□ -1.81
SOD1	YJR104C	MAS2	P11914	482 aa		3.72	□□□□□ -1.81
SOD1	YJR104C	HMG1	P12683	1054 aa		3.72	□□□□□ -1.81
SOD1	YJR104C	SEC23	P15303	768 aa	Known RBP	3.72	□□□□□ -1.81
SOD1	YJR104C	PHO13	P19881	312 aa		3.72	□□□□□ -1.81
SOD1	YJR104C	ADE2	P21264	571 aa	Known RBP	3.72	□□□□□ -1.81
SOD1	YJR104C	SEC15	P22224	910 aa		3.72	□□□□□ -1.81
SOD1	YJR104C	RRP43	P25359	394 aa	Predicted RBP	3.72	□□□□□ -1.81
SOD1	YJR104C	RDS1	P25611	832 aa		3.72	□□□□□ -1.81
SOD1	YJR104C	VPH2	P32341	215 aa		3.72	□□□□□ -1.81
SOD1	YJR104C	DAL1	P32375	460 aa		3.72	□□□□□ -1.81
SOD1	YJR104C	SFP1	P32432	683 aa		3.72	□□□□□ -1.81
SOD1	YJR104C	KAP122	P32767	1081 aa		3.72	□□□□□ -1.81
SOD1	YJR104C	KES1	P35844	434 aa	Known RBP	3.72	□□□□□ -1.81
SOD1	YJR104C	PTK1	P36002	662 aa	Predicted RBP	3.72	□□□□□ -1.81
SOD1	YJR104C	YKT6	P36015	200 aa	Known RBP	3.72	□□□□□ -1.81
SOD1	YJR104C	YBR242W	P38331	238 aa		3.72	□□□□□ -1.81
SOD1	YJR104C	RIM4	P38741	713 aa		3.72	□□□□□ -1.81
SOD1	YJR104C	CIC1	P38779	376 aa	Known RBP	3.72	□□□□□ -1.81
SOD1	YJR104C	REV7	P38927	245 aa		3.72	□□□□□ -1.81
SOD1	YJR104C	YHB1	P39676	399 aa	Known RBP	3.72	□□□□□ -1.81
SOD1	YJR104C	YJR008W	P47085	338 aa		3.72	□□□□□ -1.81
SOD1	YJR104C	YJR098C	P47139	656 aa		3.72	□□□□□ -1.81
SOD1	YJR104C	IMD4	P50094	524 aa	Known RBP	3.72	□□□□□ -1.81
SOD1	YJR104C	FMS1	P50264	508 aa		3.72	□□□□□ -1.81
SOD1	YJR104C	PCL10	P53124	433 aa		3.72	□□□□□ -1.81
SOD1	YJR104C	CDC55	Q00362	526 aa		3.72	□□□□□ -1.81
SOD1	YJR104C	STP1	Q00947	519 aa		3.72	□□□□□ -1.81
SOD1	YJR104C	YPL109C	Q02981	657 aa		3.72	□□□□□ -1.81
SOD1	YJR104C	RSM28	Q03430	361 aa		3.72	□□□□□ -1.81
SOD1	YJR104C	MSH6	Q03834	1242 aa		3.72	□□□□□ -1.81
SOD1	YJR104C	SVF1	Q05515	481 aa		3.72	□□□□□ -1.81
SOD1	YJR104C	BSC2	Q05611	235 aa		3.72	□□□□□ -1.81
SOD1	YJR104C	YLR346C	Q06139	101 aa		3.72	□□□□□ -1.81
SOD1	YJR104C	ATG17	Q06410	417 aa		3.72	□□□□□ -1.81
SOD1	YJR104C	VAC14	Q06708	880 aa		3.72	□□□□□ -1.81
SOD1	YJR104C	PSK2	Q08217	1101 aa		3.72	□□□□□ -1.81
SOD1	YJR104C	ELG1	Q12050	791 aa		3.72	□□□□□ -1.81
SOD1	YJR104C	GNT1	Q12096	491 aa		3.72	□□□□□ -1.81
SOD1	YJR104C	SCM3	Q12334	223 aa		3.72	□□□□□ -1.81
SOD1	YJR104C	HTZ1	Q12692	134 aa	Known RBP	3.72	□□□□□ -1.81
SOD1	YJR104C	RPS9A	O13516	197 aa	Known RBP	3.71	□□□□□ -1.82
SOD1	YJR104C	CDC31	P06704	161 aa	Known RBP	3.71	□□□□□ -1.82
SOD1	YJR104C	PHO4	P07270	312 aa	Known RBP	3.71	□□□□□ -1.82
SOD1	YJR104C	SEN2	P16658	377 aa		3.71	□□□□□ -1.82
SOD1	YJR104C	VPS1	P21576	704 aa	Known RBP	3.71	□□□□□ -1.82
SOD1	YJR104C	MSN1	P22148	382 aa		3.71	□□□□□ -1.82
SOD1	YJR104C	NIP1	P32497	812 aa	Known RBP	3.71	□□□□□ -1.82
SOD1	YJR104C	ATO2	P32907	282 aa		3.71	□□□□□ -1.82
SOD1	YJR104C	SMY2	P32909	740 aa	Known RBP	3.71	□□□□□ -1.82

Retrieved 100 of 5,963 RNA–protein pairs in 52.8 ms