RNA–Protein interactions for RNA: YJR104C

SOD1, Transcript of Cytosolic copper-zinc superoxide dismutase, yeastyeast

Gene SOD1, Length 465 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SOD1YJR104C MON2P48563 1636 aaPredicted RBP8.59□□□□□ -1.03
SOD1YJR104C INO80P53115 1489 aa8.56□□□□□ -1.04
SOD1YJR104C RSE1Q04693 1361 aaKnown RBP8.26□□□□□ -1.09
SOD1YJR104C DNA2P38859 1522 aa8.16□□□□□ -1.1
SOD1YJR104C KOG1P38873 1557 aa7.88□□□□□ -1.15
SOD1YJR104C SWR1Q05471 1514 aa7.83□□□□□ -1.16
SOD1YJR104C SPA2P23201 1466 aaKnown RBP7.8□□□□□ -1.16
SOD1YJR104C DRS1P32892 752 aaKnown RBP7.59□□□□□ -1.19
SOD1YJR104C MTC1P47018 478 aaKnown RBP7.57□□□□□ -1.2
SOD1YJR104C MIF2P35201 549 aa7.5□□□□□ -1.21
SOD1YJR104C TY1B-DR4Q07793 1604 aa7.37□□□□□ -1.23
SOD1YJR104C TCB3Q03640 1545 aaKnown RBP7.29□□□□□ -1.24
SOD1YJR104C YFR006WP43590 535 aa7.19□□□□□ -1.26
SOD1YJR104C ECM5Q03214 1411 aa7.16□□□□□ -1.26
SOD1YJR104C REV3P14284 1504 aa7.11□□□□□ -1.27
SOD1YJR104C MDS3P53094 1487 aa7.01□□□□□ -1.29
SOD1YJR104C BUD4P47136 1447 aa6.99□□□□□ -1.29
SOD1YJR104C THO2P53552 1597 aaKnown RBP6.95□□□□□ -1.3
SOD1YJR104C SPT6P23615 1451 aaKnown RBP6.94□□□□□ -1.3
SOD1YJR104C HSL1P34244 1518 aa6.94□□□□□ -1.3
SOD1YJR104C PEP1P32319 1579 aa6.88□□□□□ -1.31
SOD1YJR104C BPT1P14772 1559 aa6.85□□□□□ -1.31
SOD1YJR104C ABP1P15891 592 aaKnown RBP6.79□□□□□ -1.32
SOD1YJR104C BNI1P41832 1953 aa6.74□□□□□ -1.33
SOD1YJR104C YCF1P39109 1515 aaKnown RBP6.74□□□□□ -1.33
SOD1YJR104C HIR3P47171 1648 aa6.73□□□□□ -1.33
SOD1YJR104C MYO2P19524 1574 aaKnown RBP6.73□□□□□ -1.33
SOD1YJR104C LTE1P07866 1435 aa6.71□□□□□ -1.34
SOD1YJR104C TAF2P23255 1407 aa6.67□□□□□ -1.34
SOD1YJR104C BFR2Q06631 534 aaKnown RBP6.65□□□□□ -1.34
SOD1YJR104C MET5P47169 1442 aa6.65□□□□□ -1.35
SOD1YJR104C ITT1Q04638 464 aa6.64□□□□□ -1.35
SOD1YJR104C IRC20Q06554 1556 aa6.63□□□□□ -1.35
SOD1YJR104C CDC25P04821 1589 aa6.62□□□□□ -1.35
SOD1YJR104C DNF1P32660 1571 aa6.62□□□□□ -1.35
SOD1YJR104C ATG2P53855 1592 aa6.61□□□□□ -1.35
SOD1YJR104C SGS1P35187 1447 aa6.6□□□□□ -1.35
SOD1YJR104C RPA190P10964 1664 aaKnown RBP6.58□□□□□ -1.36
SOD1YJR104C SSK2P53599 1579 aa6.57□□□□□ -1.36
SOD1YJR104C MMS1Q06211 1407 aa6.56□□□□□ -1.36
SOD1YJR104C RPO31P04051 1460 aa6.53□□□□□ -1.36
SOD1YJR104C GEA2P39993 1459 aaKnown RBP6.52□□□□□ -1.37
SOD1YJR104C ESC1Q03661 1658 aaKnown RBP6.45□□□□□ -1.38
SOD1YJR104C XRN1P22147 1528 aaKnown RBP6.45□□□□□ -1.38
SOD1YJR104C RKR1Q04781 1562 aa6.4□□□□□ -1.39
SOD1YJR104C DIP2Q12220 943 aaPredicted RBP6.38□□□□□ -1.39
SOD1YJR104C CHD1P32657 1468 aa6.36□□□□□ -1.39
SOD1YJR104C SKI3P17883 1432 aaKnown RBP6.36□□□□□ -1.39
SOD1YJR104C YOR093CQ12275 1648 aa6.35□□□□□ -1.39
SOD1YJR104C DNF2Q12675 1612 aa6.35□□□□□ -1.39
SOD1YJR104C DRS2P39524 1355 aa6.34□□□□□ -1.39
SOD1YJR104C UFD4P33202 1483 aa6.34□□□□□ -1.4
SOD1YJR104C TFA1P36100 482 aa6.32□□□□□ -1.4
SOD1YJR104C AVT3P36062 692 aa6.3□□□□□ -1.4
SOD1YJR104C PAN1P32521 1480 aa6.23□□□□□ -1.41
SOD1YJR104C YPK9Q12697 1472 aa6.22□□□□□ -1.41
SOD1YJR104C VPS15P22219 1454 aa6.17□□□□□ -1.42
SOD1YJR104C SIN3P22579 1536 aa6.16□□□□□ -1.42
SOD1YJR104C SCC2Q04002 1493 aa6.15□□□□□ -1.43
SOD1YJR104C TY1B-BRQ12193 1756 aa6.14□□□□□ -1.43
SOD1YJR104C TY1B-GR3Q12316 1755 aa6.14□□□□□ -1.43
SOD1YJR104C TY1B-ORQ92393 1755 aa6.14□□□□□ -1.43
SOD1YJR104C ESP1Q03018 1630 aa6.13□□□□□ -1.43
SOD1YJR104C YRF1-1P0CX20 1796 aa6.13□□□□□ -1.43
SOD1YJR104C YRF1-5P0CX21 1796 aa6.13□□□□□ -1.43
SOD1YJR104C YRF1-8P0CX22 1796 aa6.13□□□□□ -1.43
SOD1YJR104C RQC2Q12532 1038 aaKnown RBP6.12□□□□□ -1.43
SOD1YJR104C NTE1Q04958 1679 aa6.11□□□□□ -1.43
SOD1YJR104C PDR15Q04182 1529 aaKnown RBP6.09□□□□□ -1.44
SOD1YJR104C NUP159P40477 1460 aa6.06□□□□□ -1.44
SOD1YJR104C TRM732Q03496 1420 aa6.06□□□□□ -1.44
SOD1YJR104C TY2B-LR1P0C2J3 1770 aa6.05□□□□□ -1.44
SOD1YJR104C TY2B-FP0CX63 1770 aa6.05□□□□□ -1.44
SOD1YJR104C TY2B-GR2P0CX64 1770 aa6.05□□□□□ -1.44
SOD1YJR104C TY2B-CP25384 1770 aa6.05□□□□□ -1.44
SOD1YJR104C TY2B-DR2Q03494 1770 aa6.05□□□□□ -1.44
SOD1YJR104C TY1B-DR1Q03855 1755 aa6.05□□□□□ -1.44
SOD1YJR104C TY2B-DR3Q07791 1770 aaKnown RBP6.05□□□□□ -1.44
SOD1YJR104C TY2B-OR1Q12113 1770 aa6.05□□□□□ -1.44
SOD1YJR104C TY2B-DR1Q12472 1770 aa6.05□□□□□ -1.44
SOD1YJR104C TY2B-OR2Q12501 1770 aa6.05□□□□□ -1.44
SOD1YJR104C NUP170P38181 1502 aa5.99□□□□□ -1.45
SOD1YJR104C ISW2Q08773 1120 aa5.99□□□□□ -1.45
SOD1YJR104C TY1B-HO13535 1793 aa5.98□□□□□ -1.45
SOD1YJR104C TY1B-DR5P0C2I2 1755 aa5.98□□□□□ -1.45
SOD1YJR104C TY1B-DR6P0C2I3 1755 aa5.98□□□□□ -1.45
SOD1YJR104C TY1B-LR2P0C2I5 1755 aa5.98□□□□□ -1.45
SOD1YJR104C TY1B-LR3P0C2I6 1755 aaKnown RBP5.98□□□□□ -1.45
SOD1YJR104C TY1B-PR1P0C2I9 1755 aaKnown RBP5.98□□□□□ -1.45
SOD1YJR104C TY1B-PR2P0C2J0 1756 aa5.98□□□□□ -1.45
SOD1YJR104C TY1B-PR3P0C2J1 1755 aaKnown RBP5.98□□□□□ -1.45
SOD1YJR104C TY1B-JR1P47098 1755 aa5.98□□□□□ -1.45
SOD1YJR104C TY1B-ML2Q03434 1755 aaKnown RBP5.98□□□□□ -1.45
SOD1YJR104C TY1B-ER1Q03612 1755 aa5.98□□□□□ -1.45
SOD1YJR104C TY1B-ML1Q04711 1755 aaKnown RBP5.98□□□□□ -1.45
SOD1YJR104C TY1B-GR2Q12269 1755 aa5.98□□□□□ -1.45
SOD1YJR104C TY1B-OLQ12273 1755 aa5.98□□□□□ -1.45
SOD1YJR104C TY1B-PLQ12414 1755 aaKnown RBP5.98□□□□□ -1.45
SOD1YJR104C MMS22Q06164 1454 aa5.98□□□□□ -1.45
SOD1YJR104C GLN1P32288 370 aaKnown RBP5.96□□□□□ -1.46
Retrieved 100 of 5,963 RNA–protein pairs in 42.4 ms