RNA–Protein interactions for RNA: YJR104C

SOD1, Transcript of Cytosolic copper-zinc superoxide dismutase, yeast

Gene SOD1, Length 465 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SOD1	YJR104C	MON2	P48563	1636 aa	Predicted RBP	8.59	□□□□□ -1.03
SOD1	YJR104C	INO80	P53115	1489 aa		8.56	□□□□□ -1.04
SOD1	YJR104C	RSE1	Q04693	1361 aa	Known RBP	8.26	□□□□□ -1.09
SOD1	YJR104C	DNA2	P38859	1522 aa		8.16	□□□□□ -1.1
SOD1	YJR104C	KOG1	P38873	1557 aa		7.88	□□□□□ -1.15
SOD1	YJR104C	SWR1	Q05471	1514 aa		7.83	□□□□□ -1.16
SOD1	YJR104C	SPA2	P23201	1466 aa	Known RBP	7.8	□□□□□ -1.16
SOD1	YJR104C	DRS1	P32892	752 aa	Known RBP	7.59	□□□□□ -1.19
SOD1	YJR104C	MTC1	P47018	478 aa	Known RBP	7.57	□□□□□ -1.2
SOD1	YJR104C	MIF2	P35201	549 aa		7.5	□□□□□ -1.21
SOD1	YJR104C	TY1B-DR4	Q07793	1604 aa		7.37	□□□□□ -1.23
SOD1	YJR104C	TCB3	Q03640	1545 aa	Known RBP	7.29	□□□□□ -1.24
SOD1	YJR104C	YFR006W	P43590	535 aa		7.19	□□□□□ -1.26
SOD1	YJR104C	ECM5	Q03214	1411 aa		7.16	□□□□□ -1.26
SOD1	YJR104C	REV3	P14284	1504 aa		7.11	□□□□□ -1.27
SOD1	YJR104C	MDS3	P53094	1487 aa		7.01	□□□□□ -1.29
SOD1	YJR104C	BUD4	P47136	1447 aa		6.99	□□□□□ -1.29
SOD1	YJR104C	THO2	P53552	1597 aa	Known RBP	6.95	□□□□□ -1.3
SOD1	YJR104C	SPT6	P23615	1451 aa	Known RBP	6.94	□□□□□ -1.3
SOD1	YJR104C	HSL1	P34244	1518 aa		6.94	□□□□□ -1.3
SOD1	YJR104C	PEP1	P32319	1579 aa		6.88	□□□□□ -1.31
SOD1	YJR104C	BPT1	P14772	1559 aa		6.85	□□□□□ -1.31
SOD1	YJR104C	ABP1	P15891	592 aa	Known RBP	6.79	□□□□□ -1.32
SOD1	YJR104C	BNI1	P41832	1953 aa		6.74	□□□□□ -1.33
SOD1	YJR104C	YCF1	P39109	1515 aa	Known RBP	6.74	□□□□□ -1.33
SOD1	YJR104C	HIR3	P47171	1648 aa		6.73	□□□□□ -1.33
SOD1	YJR104C	MYO2	P19524	1574 aa	Known RBP	6.73	□□□□□ -1.33
SOD1	YJR104C	LTE1	P07866	1435 aa		6.71	□□□□□ -1.34
SOD1	YJR104C	TAF2	P23255	1407 aa		6.67	□□□□□ -1.34
SOD1	YJR104C	BFR2	Q06631	534 aa	Known RBP	6.65	□□□□□ -1.34
SOD1	YJR104C	MET5	P47169	1442 aa		6.65	□□□□□ -1.35
SOD1	YJR104C	ITT1	Q04638	464 aa		6.64	□□□□□ -1.35
SOD1	YJR104C	IRC20	Q06554	1556 aa		6.63	□□□□□ -1.35
SOD1	YJR104C	CDC25	P04821	1589 aa		6.62	□□□□□ -1.35
SOD1	YJR104C	DNF1	P32660	1571 aa		6.62	□□□□□ -1.35
SOD1	YJR104C	ATG2	P53855	1592 aa		6.61	□□□□□ -1.35
SOD1	YJR104C	SGS1	P35187	1447 aa		6.6	□□□□□ -1.35
SOD1	YJR104C	RPA190	P10964	1664 aa	Known RBP	6.58	□□□□□ -1.36
SOD1	YJR104C	SSK2	P53599	1579 aa		6.57	□□□□□ -1.36
SOD1	YJR104C	MMS1	Q06211	1407 aa		6.56	□□□□□ -1.36
SOD1	YJR104C	RPO31	P04051	1460 aa		6.53	□□□□□ -1.36
SOD1	YJR104C	GEA2	P39993	1459 aa	Known RBP	6.52	□□□□□ -1.37
SOD1	YJR104C	ESC1	Q03661	1658 aa	Known RBP	6.45	□□□□□ -1.38
SOD1	YJR104C	XRN1	P22147	1528 aa	Known RBP	6.45	□□□□□ -1.38
SOD1	YJR104C	RKR1	Q04781	1562 aa		6.4	□□□□□ -1.39
SOD1	YJR104C	DIP2	Q12220	943 aa	Predicted RBP	6.38	□□□□□ -1.39
SOD1	YJR104C	CHD1	P32657	1468 aa		6.36	□□□□□ -1.39
SOD1	YJR104C	SKI3	P17883	1432 aa	Known RBP	6.36	□□□□□ -1.39
SOD1	YJR104C	YOR093C	Q12275	1648 aa		6.35	□□□□□ -1.39
SOD1	YJR104C	DNF2	Q12675	1612 aa		6.35	□□□□□ -1.39
SOD1	YJR104C	DRS2	P39524	1355 aa		6.34	□□□□□ -1.39
SOD1	YJR104C	UFD4	P33202	1483 aa		6.34	□□□□□ -1.4
SOD1	YJR104C	TFA1	P36100	482 aa		6.32	□□□□□ -1.4
SOD1	YJR104C	AVT3	P36062	692 aa		6.3	□□□□□ -1.4
SOD1	YJR104C	PAN1	P32521	1480 aa		6.23	□□□□□ -1.41
SOD1	YJR104C	YPK9	Q12697	1472 aa		6.22	□□□□□ -1.41
SOD1	YJR104C	VPS15	P22219	1454 aa		6.17	□□□□□ -1.42
SOD1	YJR104C	SIN3	P22579	1536 aa		6.16	□□□□□ -1.42
SOD1	YJR104C	SCC2	Q04002	1493 aa		6.15	□□□□□ -1.43
SOD1	YJR104C	TY1B-BR	Q12193	1756 aa		6.14	□□□□□ -1.43
SOD1	YJR104C	TY1B-GR3	Q12316	1755 aa		6.14	□□□□□ -1.43
SOD1	YJR104C	TY1B-OR	Q92393	1755 aa		6.14	□□□□□ -1.43
SOD1	YJR104C	ESP1	Q03018	1630 aa		6.13	□□□□□ -1.43
SOD1	YJR104C	YRF1-1	P0CX20	1796 aa		6.13	□□□□□ -1.43
SOD1	YJR104C	YRF1-5	P0CX21	1796 aa		6.13	□□□□□ -1.43
SOD1	YJR104C	YRF1-8	P0CX22	1796 aa		6.13	□□□□□ -1.43
SOD1	YJR104C	RQC2	Q12532	1038 aa	Known RBP	6.12	□□□□□ -1.43
SOD1	YJR104C	NTE1	Q04958	1679 aa		6.11	□□□□□ -1.43
SOD1	YJR104C	PDR15	Q04182	1529 aa	Known RBP	6.09	□□□□□ -1.44
SOD1	YJR104C	NUP159	P40477	1460 aa		6.06	□□□□□ -1.44
SOD1	YJR104C	TRM732	Q03496	1420 aa		6.06	□□□□□ -1.44
SOD1	YJR104C	TY2B-LR1	P0C2J3	1770 aa		6.05	□□□□□ -1.44
SOD1	YJR104C	TY2B-F	P0CX63	1770 aa		6.05	□□□□□ -1.44
SOD1	YJR104C	TY2B-GR2	P0CX64	1770 aa		6.05	□□□□□ -1.44
SOD1	YJR104C	TY2B-C	P25384	1770 aa		6.05	□□□□□ -1.44
SOD1	YJR104C	TY2B-DR2	Q03494	1770 aa		6.05	□□□□□ -1.44
SOD1	YJR104C	TY1B-DR1	Q03855	1755 aa		6.05	□□□□□ -1.44
SOD1	YJR104C	TY2B-DR3	Q07791	1770 aa	Known RBP	6.05	□□□□□ -1.44
SOD1	YJR104C	TY2B-OR1	Q12113	1770 aa		6.05	□□□□□ -1.44
SOD1	YJR104C	TY2B-DR1	Q12472	1770 aa		6.05	□□□□□ -1.44
SOD1	YJR104C	TY2B-OR2	Q12501	1770 aa		6.05	□□□□□ -1.44
SOD1	YJR104C	NUP170	P38181	1502 aa		5.99	□□□□□ -1.45
SOD1	YJR104C	ISW2	Q08773	1120 aa		5.99	□□□□□ -1.45
SOD1	YJR104C	TY1B-H	O13535	1793 aa		5.98	□□□□□ -1.45
SOD1	YJR104C	TY1B-DR5	P0C2I2	1755 aa		5.98	□□□□□ -1.45
SOD1	YJR104C	TY1B-DR6	P0C2I3	1755 aa		5.98	□□□□□ -1.45
SOD1	YJR104C	TY1B-LR2	P0C2I5	1755 aa		5.98	□□□□□ -1.45
SOD1	YJR104C	TY1B-LR3	P0C2I6	1755 aa	Known RBP	5.98	□□□□□ -1.45
SOD1	YJR104C	TY1B-PR1	P0C2I9	1755 aa	Known RBP	5.98	□□□□□ -1.45
SOD1	YJR104C	TY1B-PR2	P0C2J0	1756 aa		5.98	□□□□□ -1.45
SOD1	YJR104C	TY1B-PR3	P0C2J1	1755 aa	Known RBP	5.98	□□□□□ -1.45
SOD1	YJR104C	TY1B-JR1	P47098	1755 aa		5.98	□□□□□ -1.45
SOD1	YJR104C	TY1B-ML2	Q03434	1755 aa	Known RBP	5.98	□□□□□ -1.45
SOD1	YJR104C	TY1B-ER1	Q03612	1755 aa		5.98	□□□□□ -1.45
SOD1	YJR104C	TY1B-ML1	Q04711	1755 aa	Known RBP	5.98	□□□□□ -1.45
SOD1	YJR104C	TY1B-GR2	Q12269	1755 aa		5.98	□□□□□ -1.45
SOD1	YJR104C	TY1B-OL	Q12273	1755 aa		5.98	□□□□□ -1.45
SOD1	YJR104C	TY1B-PL	Q12414	1755 aa	Known RBP	5.98	□□□□□ -1.45
SOD1	YJR104C	MMS22	Q06164	1454 aa		5.98	□□□□□ -1.45
SOD1	YJR104C	GLN1	P32288	370 aa	Known RBP	5.96	□□□□□ -1.46

Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms