RNA–Protein interactions for RNA: YHR111W

UBA4, Transcript of E1-like protein that activates Urm1p before urmylation, yeastyeast

Gene UBA4, Length 1,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBA4YHR111W YBL036CP38197 257 aa10.77□□□□□ -0.69
UBA4YHR111W CBR1P38626 284 aaKnown RBP10.77□□□□□ -0.69
UBA4YHR111W YTA12P40341 825 aa10.77□□□□□ -0.69
UBA4YHR111W BIO5P53744 561 aaKnown RBP10.77□□□□□ -0.69
UBA4YHR111W UME1Q03010 460 aa10.77□□□□□ -0.69
UBA4YHR111W TRP2P00899 507 aaKnown RBP10.76□□□□□ -0.69
UBA4YHR111W HIS5P07172 385 aa10.76□□□□□ -0.69
UBA4YHR111W GYP6P32806 458 aa10.76□□□□□ -0.69
UBA4YHR111W PXL1P36166 706 aa10.76□□□□□ -0.69
UBA4YHR111W ABZ1P37254 787 aaPredicted RBP10.76□□□□□ -0.69
UBA4YHR111W EXO5P38289 585 aa10.76□□□□□ -0.69
UBA4YHR111W RTT107P38850 1070 aa10.76□□□□□ -0.69
UBA4YHR111W MMM1P41800 426 aa10.76□□□□□ -0.69
UBA4YHR111W PUS2P53167 370 aa10.76□□□□□ -0.69
UBA4YHR111W HOP2P53187 214 aa10.76□□□□□ -0.69
UBA4YHR111W VPS75P53853 264 aa10.76□□□□□ -0.69
UBA4YHR111W SFB2P53953 876 aa10.76□□□□□ -0.69
UBA4YHR111W YHM2Q04013 314 aa10.76□□□□□ -0.69
UBA4YHR111W YPR148CQ06523 435 aa10.76□□□□□ -0.69
UBA4YHR111W DIS3Q08162 1001 aaKnown RBP10.76□□□□□ -0.69
UBA4YHR111W APC5Q08683 685 aa10.76□□□□□ -0.69
UBA4YHR111W RRP6Q12149 733 aaKnown RBP10.76□□□□□ -0.69
UBA4YHR111W PDH1Q12428 516 aaKnown RBP10.76□□□□□ -0.69
UBA4YHR111W RGR1P19263 1082 aa10.75□□□□□ -0.69
UBA4YHR111W SIR1P21691 654 aa10.75□□□□□ -0.69
UBA4YHR111W MRP4P32902 394 aa10.75□□□□□ -0.69
UBA4YHR111W HXT8P40886 569 aa10.75□□□□□ -0.69
UBA4YHR111W VTC4P47075 721 aa10.75□□□□□ -0.69
UBA4YHR111W YPL062WQ02781 134 aa10.75□□□□□ -0.69
UBA4YHR111W HRD3Q05787 833 aa10.75□□□□□ -0.69
UBA4YHR111W RPS14AP06367 137 aaKnown RBP10.74□□□□□ -0.69
UBA4YHR111W VMA4P22203 233 aaKnown RBP10.74□□□□□ -0.69
UBA4YHR111W JNM1P36224 373 aa10.74□□□□□ -0.69
UBA4YHR111W ARP1P38696 384 aa10.74□□□□□ -0.69
UBA4YHR111W QNS1P38795 714 aaKnown RBP10.74□□□□□ -0.69
UBA4YHR111W RPS14BP39516 138 aaKnown RBP10.74□□□□□ -0.69
UBA4YHR111W TUB4P53378 473 aa10.74□□□□□ -0.69
UBA4YHR111W TMN2Q04562 672 aa10.74□□□□□ -0.69
UBA4YHR111W TAF9Q05027 157 aa10.74□□□□□ -0.69
UBA4YHR111W AEP2P22136 580 aa10.73□□□□□ -0.69
UBA4YHR111W YBR053CP38235 358 aa10.73□□□□□ -0.69
UBA4YHR111W SSP1P38871 571 aa10.73□□□□□ -0.69
UBA4YHR111W SMC2P38989 1170 aaKnown RBP10.73□□□□□ -0.69
UBA4YHR111W STU2P46675 888 aa10.73□□□□□ -0.69
UBA4YHR111W NSE1Q07913 336 aa10.73□□□□□ -0.69
UBA4YHR111W EMP46Q12396 444 aa10.73□□□□□ -0.69
UBA4YHR111W PDC6P26263 563 aaKnown RBP10.72□□□□□ -0.69
UBA4YHR111W MED6P38782 295 aa10.72□□□□□ -0.69
UBA4YHR111W YIL161WP40449 235 aaKnown RBP10.72□□□□□ -0.69
UBA4YHR111W HMI1Q12039 706 aa10.72□□□□□ -0.69
UBA4YHR111W FAB1P34756 2278 aa10.71□□□□□ -0.69
UBA4YHR111W BI2P03873 423 aa10.71□□□□□ -0.69
UBA4YHR111W BI4P03879 638 aa10.71□□□□□ -0.69
UBA4YHR111W SPO12P17123 173 aa10.71□□□□□ -0.69
UBA4YHR111W RRN6P32786 894 aa10.71□□□□□ -0.69
UBA4YHR111W YAP5P40574 245 aa10.71□□□□□ -0.69
UBA4YHR111W SPG3Q04398 127 aaPredicted RBP10.71□□□□□ -0.69
UBA4YHR111W ATG9Q12142 997 aa10.71□□□□□ -0.69
UBA4YHR111W LPX1Q12405 387 aaKnown RBP10.71□□□□□ -0.69
UBA4YHR111W BI3Q9ZZW7 517 aa10.71□□□□□ -0.69
UBA4YHR111W HSP78P33416 811 aa10.7□□□□□ -0.7
UBA4YHR111W ATG12P38316 186 aa10.7□□□□□ -0.7
UBA4YHR111W PRK1P40494 810 aa10.7□□□□□ -0.7
UBA4YHR111W GYP8P43570 497 aa10.7□□□□□ -0.7
UBA4YHR111W STR2P47164 639 aa10.7□□□□□ -0.7
UBA4YHR111W ATH1P48016 1211 aa10.7□□□□□ -0.7
UBA4YHR111W YDR222WQ04925 415 aa10.7□□□□□ -0.7
UBA4YHR111W YOR059CQ08448 450 aaKnown RBP10.7□□□□□ -0.7
UBA4YHR111W LCB4Q12246 624 aa10.7□□□□□ -0.7
UBA4YHR111W SRB2P34162 210 aa10.69□□□□□ -0.7
UBA4YHR111W YKL050CP35736 922 aa10.69□□□□□ -0.7
UBA4YHR111W ECM13P38195 257 aa10.69□□□□□ -0.7
UBA4YHR111W TDA3P38758 523 aa10.69□□□□□ -0.7
UBA4YHR111W CHS6P40955 746 aa10.69□□□□□ -0.7
UBA4YHR111W RPS9AO13516 197 aaKnown RBP10.68□□□□□ -0.7
UBA4YHR111W FUS1P11710 512 aa10.68□□□□□ -0.7
UBA4YHR111W KAR3P17119 729 aa10.68□□□□□ -0.7
UBA4YHR111W EST1P17214 699 aaPredicted RBP10.68□□□□□ -0.7
UBA4YHR111W MRM1P25270 412 aa10.68□□□□□ -0.7
UBA4YHR111W MIC60P36112 540 aa10.68□□□□□ -0.7
UBA4YHR111W HXT5P38695 592 aa10.68□□□□□ -0.7
UBA4YHR111W NEM1P38757 446 aa10.68□□□□□ -0.7
UBA4YHR111W SNZ3P43545 298 aa10.68□□□□□ -0.7
UBA4YHR111W YGR111WP53265 400 aa10.68□□□□□ -0.7
UBA4YHR111W SNZ2P53824 298 aa10.68□□□□□ -0.7
UBA4YHR111W TOF2Q02208 771 aa10.68□□□□□ -0.7
UBA4YHR111W SEG1Q04279 960 aa10.68□□□□□ -0.7
UBA4YHR111W AIM39Q08223 395 aa10.68□□□□□ -0.7
UBA4YHR111W NEW1Q08972 1196 aaKnown RBP10.68□□□□□ -0.7
UBA4YHR111W ARP7Q12406 477 aa10.68□□□□□ -0.7
UBA4YHR111W BEM2P39960 2167 aaKnown RBP10.67□□□□□ -0.7
UBA4YHR111W CCP1P00431 361 aa10.67□□□□□ -0.7
UBA4YHR111W PUT4P15380 627 aa10.67□□□□□ -0.7
UBA4YHR111W SIS1P25294 352 aaKnown RBP10.67□□□□□ -0.7
UBA4YHR111W PSE1P32337 1089 aaKnown RBP10.67□□□□□ -0.7
UBA4YHR111W SEG2P34250 1132 aa10.67□□□□□ -0.7
UBA4YHR111W MPE1P35728 441 aaKnown RBP10.67□□□□□ -0.7
UBA4YHR111W HSL7P38274 827 aa10.67□□□□□ -0.7
UBA4YHR111W UFE1P41834 346 aa10.67□□□□□ -0.7
UBA4YHR111W YMR1P47147 688 aaKnown RBP RIP-Chip data10.67□□□□□ -0.7not detected
Retrieved 100 of 5,963 RNA–protein pairs in 10.8 ms