RNA–Protein interactions for RNA: YHR070W

TRM5, Transcript of tRNA(m(1)G37)methyltransferase, yeastyeast

Gene TRM5, Length 1,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRM5YHR070W ABZ1P37254 787 aaPredicted RBP11.52□□□□□ -0.57
TRM5YHR070W PCM1P38628 557 aaKnown RBP11.52□□□□□ -0.57
TRM5YHR070W APM2P38700 605 aa11.52□□□□□ -0.57
TRM5YHR070W FIR1P40020 876 aa11.52□□□□□ -0.57
TRM5YHR070W SLG1P54867 378 aa11.52□□□□□ -0.57
TRM5YHR070W PIB1Q06651 286 aa11.52□□□□□ -0.57
TRM5YHR070W HAP2P06774 265 aa11.51□□□□□ -0.57
TRM5YHR070W PMS1P14242 873 aa11.51□□□□□ -0.57
TRM5YHR070W MRPL7P36519 292 aa11.51□□□□□ -0.57
TRM5YHR070W SHE3P38272 425 aaKnown RBP11.51□□□□□ -0.57
TRM5YHR070W SAK1P38990 1142 aa11.51□□□□□ -0.57
TRM5YHR070W XDJ1P39102 459 aa11.51□□□□□ -0.57
TRM5YHR070W SIP5P40210 489 aaKnown RBP11.51□□□□□ -0.57
TRM5YHR070W MDM38Q08179 573 aa11.51□□□□□ -0.57
TRM5YHR070W AIM39Q08223 395 aa11.51□□□□□ -0.57
TRM5YHR070W APL5Q08951 932 aaKnown RBP11.51□□□□□ -0.57
TRM5YHR070W PDR1P12383 1068 aa11.5□□□□□ -0.57
TRM5YHR070W SEC1P30619 724 aaKnown RBP11.5□□□□□ -0.57
TRM5YHR070W YHR202WP38887 602 aa11.5□□□□□ -0.57
TRM5YHR070W OPT1P40897 799 aa11.5□□□□□ -0.57
TRM5YHR070W MIC19P43594 170 aa11.5□□□□□ -0.57
TRM5YHR070W NMD5P46970 1048 aa11.5□□□□□ -0.57
TRM5YHR070W INP52P50942 1183 aa11.5□□□□□ -0.57
TRM5YHR070W SKY1Q03656 742 aa11.5□□□□□ -0.57
TRM5YHR070W SDH5Q08230 162 aa11.5□□□□□ -0.57
TRM5YHR070W RIO1Q12196 484 aaKnown RBP11.5□□□□□ -0.57
TRM5YHR070W TUB3P09734 445 aaKnown RBP11.5□□□□□ -0.57
TRM5YHR070W PRP9P19736 530 aaKnown RBP11.5□□□□□ -0.57
TRM5YHR070W LRE1P25579 583 aaKnown RBP11.5□□□□□ -0.57
TRM5YHR070W GCD6P32501 712 aaKnown RBP11.5□□□□□ -0.57
TRM5YHR070W SWC5P38326 303 aa11.5□□□□□ -0.57
TRM5YHR070W YNL320WP42840 284 aa11.5□□□□□ -0.57
TRM5YHR070W YNL011CP53980 444 aa11.5□□□□□ -0.57
TRM5YHR070W RAD10P06838 210 aa11.49□□□□□ -0.57
TRM5YHR070W ADK2P26364 225 aa11.49□□□□□ -0.57
TRM5YHR070W SRB2P34162 210 aa11.49□□□□□ -0.57
TRM5YHR070W LAS1P36146 502 aaPredicted RBP11.49□□□□□ -0.57
TRM5YHR070W CCL1P37366 393 aa11.49□□□□□ -0.57
TRM5YHR070W YEL023CP39992 682 aa11.49□□□□□ -0.57
TRM5YHR070W KHA1P40309 873 aa11.49□□□□□ -0.57
TRM5YHR070W SPP1Q03012 353 aa11.49□□□□□ -0.57
TRM5YHR070W YRR1Q12172 810 aa11.49□□□□□ -0.57
TRM5YHR070W MSD1P15179 658 aaKnown RBP11.48□□□□□ -0.57
TRM5YHR070W NFU1P32860 256 aa11.48□□□□□ -0.57
TRM5YHR070W UBC6P33296 250 aaPredicted RBP11.48□□□□□ -0.57
TRM5YHR070W OLA1P38219 394 aaKnown RBP11.48□□□□□ -0.57
TRM5YHR070W PCA1P38360 1216 aa11.48□□□□□ -0.57
TRM5YHR070W TIF5P38431 405 aaKnown RBP11.48□□□□□ -0.57
TRM5YHR070W PFD1P46988 109 aa11.48□□□□□ -0.57
TRM5YHR070W KAP95Q06142 861 aaKnown RBP11.48□□□□□ -0.57
TRM5YHR070W AEP2P22136 580 aa11.47□□□□□ -0.57
TRM5YHR070W PUF4P25339 888 aaKnown RBP RIP-Chip data11.47□□□□□ -0.57not detected
TRM5YHR070W WHI3P34761 661 aaKnown RBP11.47□□□□□ -0.57
TRM5YHR070W YBR284WP38150 797 aa11.47□□□□□ -0.57
TRM5YHR070W MSG5P38590 489 aa11.47□□□□□ -0.57
TRM5YHR070W YIL054WP40524 105 aa11.47□□□□□ -0.57
TRM5YHR070W CDC55Q00362 526 aa11.47□□□□□ -0.57
TRM5YHR070W UTP6Q02354 440 aaKnown RBP11.47□□□□□ -0.57
TRM5YHR070W ELP3Q02908 557 aaKnown RBP11.47□□□□□ -0.57
TRM5YHR070W TAF9Q05027 157 aa11.47□□□□□ -0.57
TRM5YHR070W GPM2Q12008 311 aa11.47□□□□□ -0.57
TRM5YHR070W YKL068W-AQ3E826 78 aa11.47□□□□□ -0.57
TRM5YHR070W VPS5Q92331 675 aa11.47□□□□□ -0.57
TRM5YHR070W TKL2P33315 681 aa11.46□□□□□ -0.57
TRM5YHR070W HMT1P38074 348 aa11.46□□□□□ -0.57
TRM5YHR070W PBP2P38151 413 aaKnown RBP RIP-Chip data11.46□□□□□ -0.57not detected
TRM5YHR070W YMR134WP40207 237 aa11.46□□□□□ -0.57
TRM5YHR070W TMA108P40462 946 aa11.46□□□□□ -0.57
TRM5YHR070W YML6P51998 286 aa11.46□□□□□ -0.57
TRM5YHR070W YPL062WQ02781 134 aa11.46□□□□□ -0.57
TRM5YHR070W RCL1Q08096 367 aaPredicted RBP11.46□□□□□ -0.57
TRM5YHR070W CIR2Q08822 631 aa11.46□□□□□ -0.57
TRM5YHR070W YDR018CQ12185 396 aa11.46□□□□□ -0.57
TRM5YHR070W ECM2P38241 364 aaKnown RBP11.45□□□□□ -0.58
TRM5YHR070W ERP2P39704 215 aa11.45□□□□□ -0.58
TRM5YHR070W AVT2P39981 480 aa11.45□□□□□ -0.58
TRM5YHR070W ARG2P40360 574 aa11.45□□□□□ -0.58
TRM5YHR070W YJL045WP47052 634 aa11.45□□□□□ -0.58
TRM5YHR070W YNL108CP53929 270 aa11.45□□□□□ -0.58
TRM5YHR070W YNL040WP53960 456 aaPredicted RBP11.45□□□□□ -0.58
TRM5YHR070W RPL22BP56628 122 aaKnown RBP11.45□□□□□ -0.58
TRM5YHR070W THI7Q05998 598 aa11.45□□□□□ -0.58
TRM5YHR070W PEP7P32609 515 aa11.45□□□□□ -0.58
TRM5YHR070W MUD2P36084 527 aaKnown RBP11.45□□□□□ -0.58
TRM5YHR070W APN2P38207 520 aa11.45□□□□□ -0.58
TRM5YHR070W SPP381P38282 291 aaPredicted RBP11.45□□□□□ -0.58
TRM5YHR070W RAD55P38953 406 aa11.45□□□□□ -0.58
TRM5YHR070W LYS9P38999 446 aa11.45□□□□□ -0.58
TRM5YHR070W TAF10Q12030 206 aa11.45□□□□□ -0.58
TRM5YHR070W APM4Q99186 491 aa11.45□□□□□ -0.58
TRM5YHR070W YLR422WQ06409 1932 aa11.44□□□□□ -0.58
TRM5YHR070W UBR2Q07963 1872 aa11.44□□□□□ -0.58
TRM5YHR070W MEI4P29467 408 aa11.44□□□□□ -0.58
TRM5YHR070W RFS1P38234 210 aaKnown RBP11.44□□□□□ -0.58
TRM5YHR070W HSL7P38274 827 aa11.44□□□□□ -0.58
TRM5YHR070W MKT1P40850 830 aaKnown RBP11.44□□□□□ -0.58
TRM5YHR070W YGR283CP53336 341 aaPredicted RBP11.44□□□□□ -0.58
TRM5YHR070W YNL247WP53852 767 aaKnown RBP11.44□□□□□ -0.58
TRM5YHR070W DDC1Q08949 612 aa11.44□□□□□ -0.58
TRM5YHR070W YPK1P12688 680 aaKnown RBP11.43□□□□□ -0.58
Retrieved 100 of 5,963 RNA–protein pairs in 68.3 ms