RNA–Protein interactions for RNA: YER164W

CHD1, Transcript of Chromatin remodeler that regulates various aspects of transcription, yeastyeast

Gene CHD1, Length 4,407 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CHD1YER164W PUS5Q06244 254 aa3.9□□□□□ -1.79
CHD1YER164W GPN2Q08726 347 aaPredicted RBP3.9□□□□□ -1.79
CHD1YER164W RKM1Q08961 583 aaPredicted RBP3.9□□□□□ -1.79
CHD1YER164W SEC15P22224 910 aa3.9□□□□□ -1.79
CHD1YER164W SAH1P39954 449 aaKnown RBP3.9□□□□□ -1.79
CHD1YER164W CNN1P43618 361 aa3.9□□□□□ -1.79
CHD1YER164W VPS16Q03308 798 aa3.9□□□□□ -1.79
CHD1YER164W LAG2Q92325 660 aa3.9□□□□□ -1.79
CHD1YER164W YLR278CQ05854 1341 aa3.9□□□□□ -1.79
CHD1YER164W SPT16P32558 1035 aaKnown RBP3.89□□□□□ -1.79
CHD1YER164W TBS1P38114 1094 aa3.89□□□□□ -1.79
CHD1YER164W YJL206CP39529 758 aa3.89□□□□□ -1.79
CHD1YER164W RPS7BP48164 190 aaKnown RBP3.89□□□□□ -1.79
CHD1YER164W TBF1Q02457 562 aa3.89□□□□□ -1.79
CHD1YER164W ECI1Q05871 280 aa3.89□□□□□ -1.79
CHD1YER164W NCA2Q12374 616 aa3.89□□□□□ -1.79
CHD1YER164W FAR1P21268 830 aa3.89□□□□□ -1.79
CHD1YER164W TGL1P34163 548 aa3.89□□□□□ -1.79
CHD1YER164W YKL063CP35725 167 aa3.89□□□□□ -1.79
CHD1YER164W ATG14P38270 344 aa3.89□□□□□ -1.79
CHD1YER164W YHL008CP38750 627 aa3.89□□□□□ -1.79
CHD1YER164W SIT1P39980 628 aa3.89□□□□□ -1.79
CHD1YER164W ALG5P40350 334 aa3.89□□□□□ -1.79
CHD1YER164W MKT1P40850 830 aaKnown RBP3.89□□□□□ -1.79
CHD1YER164W FAR3P46671 204 aa3.89□□□□□ -1.79
CHD1YER164W YML6P51998 286 aa3.89□□□□□ -1.79
CHD1YER164W YNL247WP53852 767 aaKnown RBP3.89□□□□□ -1.79
CHD1YER164W YDR476CQ03362 224 aa3.89□□□□□ -1.79
CHD1YER164W GPI13Q07830 1017 aa3.89□□□□□ -1.79
CHD1YER164W CDC31P06704 161 aaKnown RBP3.89□□□□□ -1.79
CHD1YER164W MAK16P10962 306 aaPredicted RBP3.89□□□□□ -1.79
CHD1YER164W MSH2P25847 964 aa3.89□□□□□ -1.79
CHD1YER164W MRS6P32864 603 aaKnown RBP3.89□□□□□ -1.79
CHD1YER164W YKL050CP35736 922 aa3.89□□□□□ -1.79
CHD1YER164W YBP1P38315 674 aa3.89□□□□□ -1.79
CHD1YER164W DIM1P41819 318 aaKnown RBP3.89□□□□□ -1.79
CHD1YER164W EMC2P47133 292 aaKnown RBP3.89□□□□□ -1.79
CHD1YER164W RPA14P50106 137 aa3.89□□□□□ -1.79
CHD1YER164W VID30P53076 958 aa3.89□□□□□ -1.79
CHD1YER164W MRPL50P53724 139 aa3.89□□□□□ -1.79
CHD1YER164W NCS2P53923 493 aaPredicted RBP3.89□□□□□ -1.79
CHD1YER164W SRL4Q03085 281 aa3.89□□□□□ -1.79
CHD1YER164W YML108WQ03759 105 aa3.89□□□□□ -1.79
CHD1YER164W NOP12Q08208 459 aaKnown RBP3.89□□□□□ -1.79
CHD1YER164W YPL277CQ08989 487 aa3.89□□□□□ -1.79
CHD1YER164W TRP2P00899 507 aaKnown RBP3.88□□□□□ -1.79
CHD1YER164W PRP22P24384 1145 aaKnown RBP3.88□□□□□ -1.79
CHD1YER164W TGL4P36165 910 aa3.88□□□□□ -1.79
CHD1YER164W KTR4P38131 464 aa3.88□□□□□ -1.79
CHD1YER164W PBP2P38151 413 aaKnown RBP RIP-Chip data3.88□□□□□ -1.79not detected
CHD1YER164W REG2P38232 338 aa3.88□□□□□ -1.79
CHD1YER164W VMA22P38784 181 aa3.88□□□□□ -1.79
CHD1YER164W NMD3P38861 518 aaKnown RBP3.88□□□□□ -1.79
CHD1YER164W SCS2P40075 244 aaKnown RBP3.88□□□□□ -1.79
CHD1YER164W JEM1P40358 645 aa3.88□□□□□ -1.79
CHD1YER164W FMP33P46998 180 aa3.88□□□□□ -1.79
CHD1YER164W TMA22P47089 198 aaPredicted RBP3.88□□□□□ -1.79
CHD1YER164W TRF5P48561 642 aaKnown RBP3.88□□□□□ -1.79
CHD1YER164W TAM41P53230 385 aa3.88□□□□□ -1.79
CHD1YER164W FPK1P53739 893 aa3.88□□□□□ -1.79
CHD1YER164W ALD6P54115 500 aaKnown RBP3.88□□□□□ -1.79
CHD1YER164W ARP9Q05123 467 aa3.88□□□□□ -1.79
CHD1YER164W PIG1Q06216 648 aa3.88□□□□□ -1.79
CHD1YER164W PSR1Q07800 427 aa3.88□□□□□ -1.79
CHD1YER164W TCO89Q08921 799 aa3.88□□□□□ -1.79
CHD1YER164W CLF1Q12309 687 aaPredicted RBP3.88□□□□□ -1.79
CHD1YER164W SRD1P09007 221 aa3.88□□□□□ -1.79
CHD1YER164W DAL2P25335 343 aa3.88□□□□□ -1.79
CHD1YER164W SKG6P32900 734 aaPredicted RBP3.88□□□□□ -1.79
CHD1YER164W RPT5P33297 434 aaKnown RBP3.88□□□□□ -1.79
CHD1YER164W EXO5P38289 585 aa3.88□□□□□ -1.79
CHD1YER164W TRM5P38793 499 aa3.88□□□□□ -1.79
CHD1YER164W SEC31P38968 1273 aaKnown RBP3.88□□□□□ -1.79
CHD1YER164W SHE10P53075 577 aa3.88□□□□□ -1.79
CHD1YER164W UBP2Q01476 1272 aa3.88□□□□□ -1.79
CHD1YER164W YDR090CQ03193 310 aa3.88□□□□□ -1.79
CHD1YER164W OYE2Q03558 400 aaKnown RBP3.88□□□□□ -1.79
CHD1YER164W ACM1Q08981 209 aa3.88□□□□□ -1.79
CHD1YER164W CRM1P30822 1084 aaKnown RBP3.88□□□□□ -1.79
CHD1YER164W SUV3P32580 737 aa3.88□□□□□ -1.79
CHD1YER164W GYP6P32806 458 aa3.88□□□□□ -1.79
CHD1YER164W COY1P34237 679 aa3.88□□□□□ -1.79
CHD1YER164W NUP120P35729 1037 aa3.88□□□□□ -1.79
CHD1YER164W HIS2P38635 335 aa3.88□□□□□ -1.79
CHD1YER164W TDA3P38758 523 aa3.88□□□□□ -1.79
CHD1YER164W PAC11P40960 533 aa3.88□□□□□ -1.79
CHD1YER164W CLA4P48562 842 aa3.88□□□□□ -1.79
CHD1YER164W YGL108CP53139 140 aa3.88□□□□□ -1.79
CHD1YER164W YGR021WP53212 290 aa3.88□□□□□ -1.79
CHD1YER164W YKR005CQ02203 525 aa3.88□□□□□ -1.79
CHD1YER164W SLD5Q03406 294 aa3.88□□□□□ -1.79
CHD1YER164W ACL4Q03771 387 aa3.88□□□□□ -1.79
CHD1YER164W PNP1Q05788 311 aa3.88□□□□□ -1.79
CHD1YER164W DBP9Q06218 594 aaKnown RBP3.88□□□□□ -1.79
CHD1YER164W MSS116P15424 664 aaKnown RBP3.88□□□□□ -1.79
CHD1YER164W CKA2P19454 339 aa3.88□□□□□ -1.79
CHD1YER164W RPL5P26321 297 aaKnown RBP3.88□□□□□ -1.79
CHD1YER164W RTG2P32608 588 aaKnown RBP3.88□□□□□ -1.79
CHD1YER164W VPS35P34110 944 aa3.88□□□□□ -1.79
CHD1YER164W VPS21P36017 210 aaKnown RBP3.88□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 351.5 ms