RNA–Protein interactions for RNA: YER128W

VFA1, Transcript of Protein that interacts with Vps4p and has a role in vacuolar sorting, yeastyeast

Gene VFA1, Length 612 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VFA1YER128W OLA1P38219 394 aaKnown RBP3.73□□□□□ -1.81
VFA1YER128W SSZ1P38788 538 aaKnown RBP3.73□□□□□ -1.81
VFA1YER128W VPS41P38959 992 aa3.73□□□□□ -1.81
VFA1YER128W FMP52P40008 231 aa3.73□□□□□ -1.81
VFA1YER128W DUS1P53759 423 aaKnown RBP3.73□□□□□ -1.81
VFA1YER128W PNG1Q02890 363 aa3.73□□□□□ -1.81
VFA1YER128W SNZ1Q03148 297 aa3.73□□□□□ -1.81
VFA1YER128W SSQ1Q05931 657 aaPredicted RBP3.73□□□□□ -1.81
VFA1YER128W DBP10Q12389 995 aaKnown RBP3.73□□□□□ -1.81
VFA1YER128W LAT1P12695 482 aaKnown RBP3.72□□□□□ -1.81
VFA1YER128W MER1P16523 270 aa3.72□□□□□ -1.81
VFA1YER128W SEN2P16658 377 aa3.72□□□□□ -1.81
VFA1YER128W ACP1P32463 125 aa3.72□□□□□ -1.81
VFA1YER128W DPH5P32469 300 aaPredicted RBP3.72□□□□□ -1.81
VFA1YER128W MRPL40P36534 297 aa3.72□□□□□ -1.81
VFA1YER128W YJL206CP39529 758 aa3.72□□□□□ -1.81
VFA1YER128W ARB1P40024 610 aaKnown RBP3.72□□□□□ -1.81
VFA1YER128W MAM1P40065 302 aa3.72□□□□□ -1.81
VFA1YER128W MET18P40469 1032 aa3.72□□□□□ -1.81
VFA1YER128W IRR1P40541 1150 aa3.72□□□□□ -1.81
VFA1YER128W PXA1P41909 870 aa3.72□□□□□ -1.81
VFA1YER128W YRB1P41920 201 aaKnown RBP3.72□□□□□ -1.81
VFA1YER128W TEL2P53038 688 aa3.72□□□□□ -1.81
VFA1YER128W HOP2P53187 214 aa3.72□□□□□ -1.81
VFA1YER128W DNM1P54861 757 aa3.72□□□□□ -1.81
VFA1YER128W CWC21Q03375 135 aaKnown RBP3.72□□□□□ -1.81
VFA1YER128W RSM28Q03430 361 aa3.72□□□□□ -1.81
VFA1YER128W MUS81Q04149 632 aaPredicted RBP3.72□□□□□ -1.81
VFA1YER128W VPS20Q04272 221 aa3.72□□□□□ -1.81
VFA1YER128W VTI1Q04338 217 aa3.72□□□□□ -1.81
VFA1YER128W TAP42Q04372 366 aa3.72□□□□□ -1.81
VFA1YER128W FUS2Q05670 677 aa3.72□□□□□ -1.81
VFA1YER128W NNT1Q05874 261 aa3.72□□□□□ -1.81
VFA1YER128W SMD2Q06217 110 aaKnown RBP3.72□□□□□ -1.81
VFA1YER128W PIN2Q12057 282 aa3.72□□□□□ -1.81
VFA1YER128W HAL9Q12180 1030 aa3.72□□□□□ -1.81
VFA1YER128W YRM1Q12340 786 aa3.72□□□□□ -1.81
VFA1YER128W UFD4P33202 1483 aa3.72□□□□□ -1.81
VFA1YER128W SWI1P09547 1314 aa3.71□□□□□ -1.81
VFA1YER128W IKI3Q06706 1349 aaKnown RBP3.71□□□□□ -1.81
VFA1YER128W YLR415CO13578 112 aa3.71□□□□□ -1.82
VFA1YER128W KAR1P11927 433 aa3.71□□□□□ -1.82
VFA1YER128W NAT1P12945 854 aaKnown RBP3.71□□□□□ -1.82
VFA1YER128W PET123P17558 318 aa3.71□□□□□ -1.82
VFA1YER128W PRP9P19736 530 aaKnown RBP3.71□□□□□ -1.82
VFA1YER128W MRPL25P23369 157 aa3.71□□□□□ -1.82
VFA1YER128W CYS3P31373 394 aaKnown RBP3.71□□□□□ -1.82
VFA1YER128W RPN12P32496 274 aa3.71□□□□□ -1.82
VFA1YER128W MRE11P32829 692 aa3.71□□□□□ -1.82
VFA1YER128W SKI2P35207 1287 aaKnown RBP RIP-Chip data3.71□□□□□ -1.82not detected
VFA1YER128W ESL2P36168 1195 aa3.71□□□□□ -1.82
VFA1YER128W UBP13P38187 747 aa3.71□□□□□ -1.82
VFA1YER128W OTU2P38747 307 aaKnown RBP3.71□□□□□ -1.82
VFA1YER128W BFR1P38934 470 aaKnown RBP RIP-Chip data3.71□□□□□ -1.82not detected
VFA1YER128W SAK1P38990 1142 aa3.71□□□□□ -1.82
VFA1YER128W SPC72P39723 622 aa3.71□□□□□ -1.82
VFA1YER128W SAP1P39955 897 aaKnown RBP3.71□□□□□ -1.82
VFA1YER128W FTR1P40088 404 aa3.71□□□□□ -1.82
VFA1YER128W EFM5P53200 248 aaKnown RBP3.71□□□□□ -1.82
VFA1YER128W LSC1P53598 329 aaKnown RBP3.71□□□□□ -1.82
VFA1YER128W MRS2Q01926 470 aa3.71□□□□□ -1.82
VFA1YER128W VMS1Q04311 632 aaKnown RBP3.71□□□□□ -1.82
VFA1YER128W RIO1Q12196 484 aaKnown RBP3.71□□□□□ -1.82
VFA1YER128W YIL002W-AQ3E7Z5 69 aa3.71□□□□□ -1.82
VFA1YER128W PEP1P32319 1579 aa3.71□□□□□ -1.82
VFA1YER128W RTC1Q08281 1341 aa3.7□□□□□ -1.82
VFA1YER128W SSN2P38931 1420 aa3.7□□□□□ -1.82
VFA1YER128W SEC14P24280 304 aaKnown RBP3.7□□□□□ -1.82
VFA1YER128W CDC10P25342 322 aaKnown RBP3.7□□□□□ -1.82
VFA1YER128W ANP1P32629 500 aa3.7□□□□□ -1.82
VFA1YER128W HBS1P32769 611 aaKnown RBP3.7□□□□□ -1.82
VFA1YER128W SCT1P32784 759 aa3.7□□□□□ -1.82
VFA1YER128W YME2P32843 850 aa3.7□□□□□ -1.82
VFA1YER128W VPS24P36095 224 aaKnown RBP3.7□□□□□ -1.82
VFA1YER128W BCD1P38772 366 aa3.7□□□□□ -1.82
VFA1YER128W YER034WP40022 185 aaKnown RBP3.7□□□□□ -1.82
VFA1YER128W RTT105P40063 208 aa3.7□□□□□ -1.82
VFA1YER128W LSG1P53145 640 aaKnown RBP3.7□□□□□ -1.82
VFA1YER128W SMX3P54999 86 aaPredicted RBP3.7□□□□□ -1.82
VFA1YER128W ARO80Q04052 950 aa3.7□□□□□ -1.82
VFA1YER128W SXM1Q04175 944 aaKnown RBP3.7□□□□□ -1.82
VFA1YER128W RRN11Q04712 507 aa3.7□□□□□ -1.82
VFA1YER128W DBP9Q06218 594 aaKnown RBP3.7□□□□□ -1.82
VFA1YER128W ARV1Q06541 321 aa3.7□□□□□ -1.82
VFA1YER128W SRB8P25648 1427 aa3.7□□□□□ -1.82
VFA1YER128W SMC4Q12267 1418 aa3.7□□□□□ -1.82
VFA1YER128W PMS1P14242 873 aa3.69□□□□□ -1.82
VFA1YER128W DPB3P27344 201 aa3.69□□□□□ -1.82
VFA1YER128W MSP1P28737 362 aa3.69□□□□□ -1.82
VFA1YER128W PAP1P29468 568 aaKnown RBP3.69□□□□□ -1.82
VFA1YER128W ORC2P32833 620 aa3.69□□□□□ -1.82
VFA1YER128W NUP120P35729 1037 aa3.69□□□□□ -1.82
VFA1YER128W RTT107P38850 1070 aa3.69□□□□□ -1.82
VFA1YER128W PFA3P42836 336 aa3.69□□□□□ -1.82
VFA1YER128W SSY5P47002 699 aa3.69□□□□□ -1.82
VFA1YER128W RAD17P48581 401 aa3.69□□□□□ -1.82
VFA1YER128W RTC4P53850 401 aa3.69□□□□□ -1.82
VFA1YER128W NOP15P53927 220 aaPredicted RBP3.69□□□□□ -1.82
VFA1YER128W ECM11Q04110 302 aa3.69□□□□□ -1.82
VFA1YER128W UBX2Q04228 584 aa3.69□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 81.5 ms