RNA–Protein interactions for RNA: YEL060C

PRB1, Transcript of Vacuolar proteinase B (yscB) with H3 N-terminal endopeptidase activity, yeast

Gene PRB1, Length 1,908 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PRB1	YEL060C	ULP1	Q02724	621 aa		7.51	□□□□□ -1.21
PRB1	YEL060C	ARR1	Q06596	294 aa		7.51	□□□□□ -1.21
PRB1	YEL060C	KEL3	Q08979	651 aa	Predicted RBP	7.51	□□□□□ -1.21
PRB1	YEL060C	PMS1	P14242	873 aa		7.5	□□□□□ -1.21
PRB1	YEL060C	VMA2	P16140	517 aa	Known RBP	7.5	□□□□□ -1.21
PRB1	YEL060C	CNA1	P23287	553 aa		7.5	□□□□□ -1.21
PRB1	YEL060C	ICL1	P28240	557 aa	Predicted RBP	7.5	□□□□□ -1.21
PRB1	YEL060C	RAD14	P28519	371 aa		7.5	□□□□□ -1.21
PRB1	YEL060C	SIP2	P34164	415 aa	Known RBP	7.5	□□□□□ -1.21
PRB1	YEL060C	UTP11	P34247	250 aa	Predicted RBP	7.5	□□□□□ -1.21
PRB1	YEL060C	TGL4	P36165	910 aa		7.5	□□□□□ -1.21
PRB1	YEL060C	SMF2	P38778	549 aa		7.5	□□□□□ -1.21
PRB1	YEL060C	YTA12	P40341	825 aa		7.5	□□□□□ -1.21
PRB1	YEL060C	SYG1	P40528	902 aa		7.5	□□□□□ -1.21
PRB1	YEL060C	DOT5	P40553	215 aa		7.5	□□□□□ -1.21
PRB1	YEL060C	RLP7	P40693	322 aa	Known RBP	7.5	□□□□□ -1.21
PRB1	YEL060C	LCB2	P40970	561 aa		7.5	□□□□□ -1.21
PRB1	YEL060C	LAM5	P43560	674 aa		7.5	□□□□□ -1.21
PRB1	YEL060C	JJJ2	P46997	583 aa		7.5	□□□□□ -1.21
PRB1	YEL060C	RSM26	P47141	266 aa		7.5	□□□□□ -1.21
PRB1	YEL060C	RFX1	P48743	811 aa		7.5	□□□□□ -1.21
PRB1	YEL060C	YGL108C	P53139	140 aa		7.5	□□□□□ -1.21
PRB1	YEL060C	YGR054W	P53235	642 aa	Known RBP	7.5	□□□□□ -1.21
PRB1	YEL060C	TIM11	P81449	96 aa	Predicted RBP	7.5	□□□□□ -1.21
PRB1	YEL060C	MSH6	Q03834	1242 aa		7.5	□□□□□ -1.21
PRB1	YEL060C	SPO71	Q03868	1245 aa		7.5	□□□□□ -1.21
PRB1	YEL060C	UFO1	Q04511	668 aa		7.5	□□□□□ -1.21
PRB1	YEL060C	DIB1	Q06819	143 aa	Predicted RBP	7.5	□□□□□ -1.21
PRB1	YEL060C	SUB2	Q07478	446 aa	Known RBP	7.5	□□□□□ -1.21
PRB1	YEL060C	TRE1	Q08919	783 aa		7.5	□□□□□ -1.21
PRB1	YEL060C	PSF3	Q12146	194 aa		7.5	□□□□□ -1.21
PRB1	YEL060C	DBP10	Q12389	995 aa	Known RBP	7.5	□□□□□ -1.21
PRB1	YEL060C	SPE4	Q12455	300 aa		7.5	□□□□□ -1.21
PRB1	YEL060C	NOT5	Q12514	560 aa	Predicted RBP	7.5	□□□□□ -1.21
PRB1	YEL060C	ILS1	P09436	1072 aa	Known RBP	7.5	□□□□□ -1.21
PRB1	YEL060C	ATR1	P13090	542 aa		7.5	□□□□□ -1.21
PRB1	YEL060C	PDC5	P16467	563 aa	Known RBP	7.5	□□□□□ -1.21
PRB1	YEL060C	AEP2	P22136	580 aa		7.5	□□□□□ -1.21
PRB1	YEL060C	SNT1	P25357	1226 aa		7.5	□□□□□ -1.21
PRB1	YEL060C	KRE2	P27809	442 aa		7.5	□□□□□ -1.21
PRB1	YEL060C	CHS3	P29465	1165 aa		7.5	□□□□□ -1.21
PRB1	YEL060C	PEX2	P32800	271 aa		7.5	□□□□□ -1.21
PRB1	YEL060C	NMD3	P38861	518 aa	Known RBP	7.5	□□□□□ -1.21
PRB1	YEL060C	FRT2	P39734	528 aa		7.5	□□□□□ -1.21
PRB1	YEL060C	YDR222W	Q04925	415 aa		7.5	□□□□□ -1.21
PRB1	YEL060C	TSR2	Q06672	205 aa	Known RBP	7.5	□□□□□ -1.21
PRB1	YEL060C	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	7.5	□□□□□ -1.21	not detected
PRB1	YEL060C	TUB1	P09733	447 aa	Known RBP	7.49	□□□□□ -1.21
PRB1	YEL060C	PET122	P10355	254 aa		7.49	□□□□□ -1.21
PRB1	YEL060C	PCK1	P10963	549 aa		7.49	□□□□□ -1.21
PRB1	YEL060C	PEX18	P38855	283 aa		7.49	□□□□□ -1.21
PRB1	YEL060C	PCF11	P39081	626 aa	Predicted RBP	7.49	□□□□□ -1.21
PRB1	YEL060C	YJL107C	P42947	387 aa		7.49	□□□□□ -1.21
PRB1	YEL060C	STB2	P46679	850 aa		7.49	□□□□□ -1.21
PRB1	YEL060C	NMA2	P53204	395 aa		7.49	□□□□□ -1.21
PRB1	YEL060C	LSC1	P53598	329 aa	Known RBP	7.49	□□□□□ -1.21
PRB1	YEL060C	BIO4	P53630	237 aa		7.49	□□□□□ -1.21
PRB1	YEL060C	ADI1	Q03677	179 aa		7.49	□□□□□ -1.21
PRB1	YEL060C	GGA1	Q06336	557 aa		7.49	□□□□□ -1.21
PRB1	YEL060C	BUD23	P25627	275 aa	Predicted RBP	7.48	□□□□□ -1.21
PRB1	YEL060C	TIF3	P34167	436 aa	Known RBP	7.48	□□□□□ -1.21
PRB1	YEL060C	PDX3	P38075	228 aa	Known RBP	7.48	□□□□□ -1.21
PRB1	YEL060C	ULP2	P40537	1034 aa	Predicted RBP	7.48	□□□□□ -1.21
PRB1	YEL060C	CTR1	P49573	406 aa		7.48	□□□□□ -1.21
PRB1	YEL060C	YML6	P51998	286 aa		7.48	□□□□□ -1.21
PRB1	YEL060C	MRM2	P53123	320 aa		7.48	□□□□□ -1.21
PRB1	YEL060C	DSL1	P53847	754 aa		7.48	□□□□□ -1.21
PRB1	YEL060C	TIM8	P57744	87 aa		7.48	□□□□□ -1.21
PRB1	YEL060C	PLP1	Q04004	230 aa		7.48	□□□□□ -1.21
PRB1	YEL060C	RPN8	Q08723	338 aa	Known RBP	7.48	□□□□□ -1.21
PRB1	YEL060C	VPS5	Q92331	675 aa		7.48	□□□□□ -1.21
PRB1	YEL060C	FLO11	P08640	1367 aa		7.48	□□□□□ -1.21
PRB1	YEL060C	YPR089W	O13585	888 aa		7.48	□□□□□ -1.21
PRB1	YEL060C	MSD1	P15179	658 aa	Known RBP	7.48	□□□□□ -1.21
PRB1	YEL060C	RGR1	P19263	1082 aa		7.48	□□□□□ -1.21
PRB1	YEL060C	YSC84	P32793	468 aa		7.48	□□□□□ -1.21
PRB1	YEL060C	PGM2	P37012	569 aa	Known RBP	7.48	□□□□□ -1.21
PRB1	YEL060C	VPS45	P38932	577 aa		7.48	□□□□□ -1.21
PRB1	YEL060C	NPT1	P39683	429 aa	Known RBP	7.48	□□□□□ -1.21
PRB1	YEL060C	BRE2	P43132	505 aa		7.48	□□□□□ -1.21
PRB1	YEL060C	SAE2	P46946	345 aa		7.48	□□□□□ -1.21
PRB1	YEL060C	BNA3	P47039	444 aa	Known RBP	7.48	□□□□□ -1.21
PRB1	YEL060C	DAN4	P47179	1161 aa		7.48	□□□□□ -1.21
PRB1	YEL060C	IMD4	P50094	524 aa	Known RBP	7.48	□□□□□ -1.21
PRB1	YEL060C	NUT1	P53114	1132 aa		7.48	□□□□□ -1.21
PRB1	YEL060C	NOG2	P53742	486 aa	Known RBP	7.48	□□□□□ -1.21
PRB1	YEL060C	ASI2	P53895	289 aa		7.48	□□□□□ -1.21
PRB1	YEL060C	MGR3	Q04472	501 aa		7.48	□□□□□ -1.21
PRB1	YEL060C	FAP7	Q12055	197 aa	Predicted RBP	7.48	□□□□□ -1.21
PRB1	YEL060C	YDL206W	Q12424	762 aa		7.48	□□□□□ -1.21
PRB1	YEL060C	TY4B-P	A0A0B7P3V8	1104 aa		7.47	□□□□□ -1.21
PRB1	YEL060C	RAD10	P06838	210 aa		7.47	□□□□□ -1.21
PRB1	YEL060C	PHO8	P11491	566 aa		7.47	□□□□□ -1.21
PRB1	YEL060C	IRE1	P32361	1115 aa		7.47	□□□□□ -1.21
PRB1	YEL060C	PTH2	P34222	208 aa		7.47	□□□□□ -1.21
PRB1	YEL060C	ETR1	P38071	380 aa		7.47	□□□□□ -1.21
PRB1	YEL060C	SUL1	P38359	859 aa		7.47	□□□□□ -1.21
PRB1	YEL060C	RGD2	P43556	714 aa		7.47	□□□□□ -1.21
PRB1	YEL060C	YGR125W	P53273	1036 aa		7.47	□□□□□ -1.21
PRB1	YEL060C	CIK1	Q01649	594 aa		7.47	□□□□□ -1.21

Retrieved 100 of 5,963 RNA–protein pairs in 21.2 ms