RNA–Protein interactions for RNA: YDR429C

TIF35, Transcript of eIF3g subunit of the eukaryotic translation initiation factor 3 (eIF3), yeast

Gene TIF35, Length 825 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TIF35	YDR429C	SUL1	P38359	859 aa		3.18	□□□□□ -1.9
TIF35	YDR429C	YIR042C	P40586	236 aa		3.18	□□□□□ -1.9
TIF35	YDR429C	RSC8	P43609	557 aa	Known RBP	3.18	□□□□□ -1.9
TIF35	YDR429C	PHM6	Q05637	104 aa		3.18	□□□□□ -1.9
TIF35	YDR429C	THI22	Q06490	572 aa		3.18	□□□□□ -1.9
TIF35	YDR429C	NGL1	Q08213	363 aa	Known RBP	3.18	□□□□□ -1.9
TIF35	YDR429C	YOL073C	Q08232	322 aa		3.18	□□□□□ -1.9
TIF35	YDR429C	SGO1	Q08490	590 aa		3.18	□□□□□ -1.9
TIF35	YDR429C	YOR378W	Q08902	515 aa		3.18	□□□□□ -1.9
TIF35	YDR429C	ATP4	P05626	244 aa		3.17	□□□□□ -1.9
TIF35	YDR429C	CAF20	P12962	161 aa	Known RBP	3.17	□□□□□ -1.9
TIF35	YDR429C	HCA4	P20448	770 aa	Known RBP	3.17	□□□□□ -1.9
TIF35	YDR429C	MF(ALPHA)2	P32435	120 aa		3.17	□□□□□ -1.9
TIF35	YDR429C	PET127	P32606	800 aa		3.17	□□□□□ -1.9
TIF35	YDR429C	MTC7	P32633	139 aa		3.17	□□□□□ -1.9
TIF35	YDR429C	SEC6	P32844	805 aa		3.17	□□□□□ -1.9
TIF35	YDR429C	BCD1	P38772	366 aa		3.17	□□□□□ -1.9
TIF35	YDR429C	IRC5	P43610	853 aa		3.17	□□□□□ -1.9
TIF35	YDR429C	BIT61	P47041	543 aa		3.17	□□□□□ -1.9
TIF35	YDR429C	BFA1	P47113	574 aa		3.17	□□□□□ -1.9
TIF35	YDR429C	SPC105	P53148	917 aa		3.17	□□□□□ -1.9
TIF35	YDR429C	REC102	Q02721	264 aa		3.17	□□□□□ -1.9
TIF35	YDR429C	DLT1	Q04216	342 aa		3.17	□□□□□ -1.9
TIF35	YDR429C	OMS1	Q06668	471 aa		3.17	□□□□□ -1.9
TIF35	YDR429C	FRE5	Q08908	694 aa		3.17	□□□□□ -1.9
TIF35	YDR429C	PIF1	P07271	859 aa		3.16	□□□□□ -1.9
TIF35	YDR429C	MET3	P08536	511 aa		3.16	□□□□□ -1.9
TIF35	YDR429C	KAR1	P11927	433 aa		3.16	□□□□□ -1.9
TIF35	YDR429C	SST2	P11972	698 aa	Known RBP	3.16	□□□□□ -1.9
TIF35	YDR429C	HIR1	P32479	840 aa		3.16	□□□□□ -1.9
TIF35	YDR429C	CDS1	P38221	457 aa		3.16	□□□□□ -1.9
TIF35	YDR429C	DUN1	P39009	513 aa		3.16	□□□□□ -1.9
TIF35	YDR429C	YJL163C	P46996	555 aa		3.16	□□□□□ -1.9
TIF35	YDR429C	RNR4	P49723	345 aa	Known RBP	3.16	□□□□□ -1.9
TIF35	YDR429C	UBC11	P52492	156 aa		3.16	□□□□□ -1.9
TIF35	YDR429C	YMR206W	Q03695	313 aa		3.16	□□□□□ -1.9
TIF35	YDR429C	ADY4	Q05955	493 aa		3.16	□□□□□ -1.9
TIF35	YDR429C	PEX15	Q08215	383 aa		3.16	□□□□□ -1.9
TIF35	YDR429C	SLX4	Q12098	748 aa		3.16	□□□□□ -1.9
TIF35	YDR429C	ATG11	Q12527	1178 aa		3.16	□□□□□ -1.9
TIF35	YDR429C	ALG7	P07286	448 aa		3.15	□□□□□ -1.91
TIF35	YDR429C	PEX1	P24004	1043 aa		3.15	□□□□□ -1.91
TIF35	YDR429C	MVD1	P32377	396 aa	Known RBP	3.15	□□□□□ -1.91
TIF35	YDR429C	BCS1	P32839	456 aa		3.15	□□□□□ -1.91
TIF35	YDR429C	APT2	P36973	181 aa		3.15	□□□□□ -1.91
TIF35	YDR429C	PPS1	P38148	807 aa		3.15	□□□□□ -1.91
TIF35	YDR429C	SFB3	P38810	929 aa		3.15	□□□□□ -1.91
TIF35	YDR429C	CCT3	P39077	534 aa	Known RBP	3.15	□□□□□ -1.91
TIF35	YDR429C	NUP60	P39705	539 aa		3.15	□□□□□ -1.91
TIF35	YDR429C	EMP65	P40085	556 aa		3.15	□□□□□ -1.91
TIF35	YDR429C	PEA2	P40091	420 aa		3.15	□□□□□ -1.91
TIF35	YDR429C	AMA1	P50082	593 aa		3.15	□□□□□ -1.91
TIF35	YDR429C	PAN2	P53010	1115 aa	Predicted RBP	3.15	□□□□□ -1.91
TIF35	YDR429C	SLD3	P53135	668 aa		3.15	□□□□□ -1.91
TIF35	YDR429C	CTK1	Q03957	528 aa	Known RBP	3.15	□□□□□ -1.91
TIF35	YDR429C	CWC2	Q12046	339 aa	Predicted RBP	3.15	□□□□□ -1.91
TIF35	YDR429C	RTK1	Q12100	620 aa	Predicted RBP	3.15	□□□□□ -1.91
TIF35	YDR429C	GAL1	P04385	528 aa		3.14	□□□□□ -1.91
TIF35	YDR429C	SIR3	P06701	978 aa		3.14	□□□□□ -1.91
TIF35	YDR429C	ERG20	P08524	352 aa	Known RBP	3.14	□□□□□ -1.91
TIF35	YDR429C	YEL076C-A	P0CX16	216 aa		3.14	□□□□□ -1.91
TIF35	YDR429C	YLR464W	P0CX17	216 aa		3.14	□□□□□ -1.91
TIF35	YDR429C	TUP1	P16649	713 aa		3.14	□□□□□ -1.91
TIF35	YDR429C	ACO1	P19414	778 aa	Known RBP RIP-Chip data	3.14	□□□□□ -1.91	not detected
TIF35	YDR429C	FEN2	P25621	512 aa	Known RBP	3.14	□□□□□ -1.91
TIF35	YDR429C	PRE4	P30657	266 aa		3.14	□□□□□ -1.91
TIF35	YDR429C	MSS1	P32559	526 aa	Predicted RBP	3.14	□□□□□ -1.91
TIF35	YDR429C	KTR4	P38131	464 aa		3.14	□□□□□ -1.91
TIF35	YDR429C	CRG1	P38892	291 aa	RIP-Chip data	3.14	□□□□□ -1.91	not detected
TIF35	YDR429C	YEL076C	P39971	216 aa		3.14	□□□□□ -1.91
TIF35	YDR429C	YIL092W	P40497	633 aa		3.14	□□□□□ -1.91
TIF35	YDR429C	YIL077C	P40508	320 aa		3.14	□□□□□ -1.91
TIF35	YDR429C	YDL183C	P48569	320 aa		3.14	□□□□□ -1.91
TIF35	YDR429C	RFX1	P48743	811 aa		3.14	□□□□□ -1.91
TIF35	YDR429C	STB4	P50104	949 aa		3.14	□□□□□ -1.91
TIF35	YDR429C	TAF4	P50105	388 aa		3.14	□□□□□ -1.91
TIF35	YDR429C	CEG1	Q01159	459 aa	Predicted RBP	3.14	□□□□□ -1.91
TIF35	YDR429C	MTD1	Q02046	320 aa	Known RBP	3.14	□□□□□ -1.91
TIF35	YDR429C	MET14	Q02196	202 aa		3.14	□□□□□ -1.91
TIF35	YDR429C	TMN2	Q04562	672 aa		3.14	□□□□□ -1.91
TIF35	YDR429C	MLH3	Q12083	715 aa		3.14	□□□□□ -1.91
TIF35	YDR429C	POM34	Q12445	299 aa		3.14	□□□□□ -1.91
TIF35	YDR429C	HSL1	P34244	1518 aa		3.14	□□□□□ -1.91
TIF35	YDR429C	PPR1	P07272	904 aa	Predicted RBP	3.13	□□□□□ -1.91
TIF35	YDR429C	KCC4	P25389	1037 aa		3.13	□□□□□ -1.91
TIF35	YDR429C	DGR2	P32330	852 aa		3.13	□□□□□ -1.91
TIF35	YDR429C	HIS7	P33734	552 aa	Known RBP	3.13	□□□□□ -1.91
TIF35	YDR429C	NIC96	P34077	839 aa		3.13	□□□□□ -1.91
TIF35	YDR429C	RMA1	P36001	430 aa	Known RBP	3.13	□□□□□ -1.91
TIF35	YDR429C	COS111	P38308	924 aa		3.13	□□□□□ -1.91
TIF35	YDR429C	YHR033W	P38690	423 aa		3.13	□□□□□ -1.91
TIF35	YDR429C	RRP8	P38961	392 aa	Known RBP	3.13	□□□□□ -1.91
TIF35	YDR429C	PRM2	P40534	656 aa		3.13	□□□□□ -1.91
TIF35	YDR429C	DAS1	P47005	663 aa		3.13	□□□□□ -1.91
TIF35	YDR429C	FHN1	P53279	174 aa		3.13	□□□□□ -1.91
TIF35	YDR429C	RNT1	Q02555	471 aa		3.13	□□□□□ -1.91
TIF35	YDR429C	TIM50	Q02776	476 aa		3.13	□□□□□ -1.91
TIF35	YDR429C	MUK1	Q02866	612 aa		3.13	□□□□□ -1.91
TIF35	YDR429C	VBA4	Q04602	768 aa	Known RBP	3.13	□□□□□ -1.91
TIF35	YDR429C	MCH5	Q08777	521 aa		3.13	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 54.7 ms