RNA–Protein interactions for RNA: YBL006C

LDB7, Transcript of Component of the RSC chromatin remodeling complex, yeastyeast

Gene LDB7, Length 543 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LDB7YBL006C SEG1Q04279 960 aa7.3□□□□□ -1.24
LDB7YBL006C HRD3Q05787 833 aa7.3□□□□□ -1.24
LDB7YBL006C TRE1Q08919 783 aa7.3□□□□□ -1.24
LDB7YBL006C VPS54Q12071 889 aa7.3□□□□□ -1.24
LDB7YBL006C APC11Q12157 165 aa7.3□□□□□ -1.24
LDB7YBL006C LCB4Q12246 624 aa7.3□□□□□ -1.24
LDB7YBL006C TRS33Q99394 268 aa7.3□□□□□ -1.24
LDB7YBL006C RPL40AP0CH08 128 aaKnown RBP7.29□□□□□ -1.24
LDB7YBL006C RPL40BP0CH09 128 aaKnown RBP7.29□□□□□ -1.24
LDB7YBL006C RGR1P19263 1082 aa7.29□□□□□ -1.24
LDB7YBL006C XRS2P33301 854 aa7.29□□□□□ -1.24
LDB7YBL006C CSG2P35206 410 aa7.29□□□□□ -1.24
LDB7YBL006C ADE17P38009 592 aaKnown RBP7.29□□□□□ -1.24
LDB7YBL006C ECM13P38195 257 aa7.29□□□□□ -1.24
LDB7YBL006C ATG12P38316 186 aa7.29□□□□□ -1.24
LDB7YBL006C DYS1P38791 387 aa7.29□□□□□ -1.24
LDB7YBL006C MND1P53102 219 aa7.29□□□□□ -1.24
LDB7YBL006C GFD1Q04839 188 aaKnown RBP7.29□□□□□ -1.24
LDB7YBL006C SPO75Q07798 868 aa7.29□□□□□ -1.24
LDB7YBL006C CDC37P06101 506 aaKnown RBP7.28□□□□□ -1.24
LDB7YBL006C KIN3P22209 435 aa7.28□□□□□ -1.24
LDB7YBL006C GSY2P27472 705 aa7.28□□□□□ -1.24
LDB7YBL006C ABZ1P37254 787 aaPredicted RBP7.28□□□□□ -1.24
LDB7YBL006C GGA2P38817 585 aaKnown RBP7.28□□□□□ -1.24
LDB7YBL006C NMD3P38861 518 aaKnown RBP7.28□□□□□ -1.24
LDB7YBL006C ERG10P41338 398 aaKnown RBP7.28□□□□□ -1.24
LDB7YBL006C DRN1P53255 507 aaKnown RBP7.28□□□□□ -1.24
LDB7YBL006C TOF2Q02208 771 aa7.28□□□□□ -1.24
LDB7YBL006C HAP5Q02516 242 aa7.28□□□□□ -1.24
LDB7YBL006C ETT1Q08421 412 aaKnown RBP7.28□□□□□ -1.24
LDB7YBL006C YOR387CQ08910 206 aa7.28□□□□□ -1.24
LDB7YBL006C LPX1Q12405 387 aaKnown RBP7.28□□□□□ -1.24
LDB7YBL006C STE5P32917 917 aa7.27□□□□□ -1.25
LDB7YBL006C HSP78P33416 811 aa7.27□□□□□ -1.25
LDB7YBL006C PTC3P34221 468 aaKnown RBP7.27□□□□□ -1.25
LDB7YBL006C YET1P35723 206 aa7.27□□□□□ -1.25
LDB7YBL006C NPR3P38742 1146 aa7.27□□□□□ -1.25
LDB7YBL006C RRM3P38766 723 aa7.27□□□□□ -1.25
LDB7YBL006C RPT2P40327 437 aaKnown RBP7.27□□□□□ -1.25
LDB7YBL006C YIR007WP40566 764 aa7.27□□□□□ -1.25
LDB7YBL006C PFD1P46988 109 aa7.27□□□□□ -1.25
LDB7YBL006C NMA2P53204 395 aa7.27□□□□□ -1.25
LDB7YBL006C GPD1Q00055 391 aaKnown RBP7.27□□□□□ -1.25
LDB7YBL006C YPL014WQ02606 381 aa7.27□□□□□ -1.25
LDB7YBL006C PIR3Q03180 325 aa7.27□□□□□ -1.25
LDB7YBL006C ARO80Q04052 950 aa7.27□□□□□ -1.25
LDB7YBL006C DIS3Q08162 1001 aaKnown RBP7.27□□□□□ -1.25
LDB7YBL006C MDM38Q08179 573 aa7.27□□□□□ -1.25
LDB7YBL006C YER152CP10356 443 aa7.26□□□□□ -1.25
LDB7YBL006C FPR1P20081 114 aaKnown RBP7.26□□□□□ -1.25
LDB7YBL006C MRP4P32902 394 aa7.26□□□□□ -1.25
LDB7YBL006C VPS24P36095 224 aaKnown RBP7.26□□□□□ -1.25
LDB7YBL006C SSP1P38871 571 aa7.26□□□□□ -1.25
LDB7YBL006C RVS167P39743 482 aaKnown RBP7.26□□□□□ -1.25
LDB7YBL006C YEL075CP39972 122 aa7.26□□□□□ -1.25
LDB7YBL006C SDS3P40505 327 aa7.26□□□□□ -1.25
LDB7YBL006C UFE1P41834 346 aa7.26□□□□□ -1.25
LDB7YBL006C PHO86P46956 311 aa7.26□□□□□ -1.25
LDB7YBL006C RSM7P47150 247 aa7.26□□□□□ -1.25
LDB7YBL006C HFM1P51979 1187 aa7.26□□□□□ -1.25
LDB7YBL006C PUS2P53167 370 aa7.26□□□□□ -1.25
LDB7YBL006C KRE33P53914 1056 aaKnown RBP7.26□□□□□ -1.25
LDB7YBL006C ESBP6P53918 673 aa7.26□□□□□ -1.25
LDB7YBL006C CWC2Q12046 339 aaPredicted RBP7.26□□□□□ -1.25
LDB7YBL006C CSF1Q12150 2958 aa7.26□□□□□ -1.25
LDB7YBL006C ENO2P00925 437 aaKnown RBP7.25□□□□□ -1.25
LDB7YBL006C RPS3P05750 240 aaKnown RBP7.25□□□□□ -1.25
LDB7YBL006C PPR1P07272 904 aaPredicted RBP7.25□□□□□ -1.25
LDB7YBL006C TRZ1P36159 838 aaPredicted RBP7.25□□□□□ -1.25
LDB7YBL006C PSY4P38193 441 aa7.25□□□□□ -1.25
LDB7YBL006C PRK1P40494 810 aa7.25□□□□□ -1.25
LDB7YBL006C RSC1P53236 928 aa7.25□□□□□ -1.25
LDB7YBL006C COQ6P53318 479 aa7.25□□□□□ -1.25
LDB7YBL006C YNR065CP53751 1116 aa7.25□□□□□ -1.25
LDB7YBL006C SPG3Q04398 127 aaPredicted RBP7.25□□□□□ -1.25
LDB7YBL006C YML082WQ04533 649 aaKnown RBP7.25□□□□□ -1.25
LDB7YBL006C APC5Q08683 685 aa7.25□□□□□ -1.25
LDB7YBL006C TMA16Q08687 178 aa7.25□□□□□ -1.25
LDB7YBL006C JIP3O13555 125 aa7.24□□□□□ -1.25
LDB7YBL006C MIP6P38760 659 aaKnown RBP7.24□□□□□ -1.25
LDB7YBL006C HEM14P40012 539 aa7.24□□□□□ -1.25
LDB7YBL006C RSM25P40496 264 aa7.24□□□□□ -1.25
LDB7YBL006C VTC4P47075 721 aa7.24□□□□□ -1.25
LDB7YBL006C RTN1Q04947 295 aaKnown RBP7.24□□□□□ -1.25
LDB7YBL006C ECM38Q05902 660 aaPredicted RBP7.24□□□□□ -1.25
LDB7YBL006C YCG1Q06680 1035 aa7.24□□□□□ -1.25
LDB7YBL006C YOL098CQ12496 1037 aa7.24□□□□□ -1.25
LDB7YBL006C CCP1P00431 361 aa7.23□□□□□ -1.25
LDB7YBL006C CDC33P07260 213 aaKnown RBP7.23□□□□□ -1.25
LDB7YBL006C PSE1P32337 1089 aaKnown RBP7.23□□□□□ -1.25
LDB7YBL006C YBR053CP38235 358 aa7.23□□□□□ -1.25
LDB7YBL006C YNL144CP53907 740 aa7.23□□□□□ -1.25
LDB7YBL006C AIM32Q04689 311 aa7.23□□□□□ -1.25
LDB7YBL006C TAF9Q05027 157 aa7.23□□□□□ -1.25
LDB7YBL006C PIN2Q12057 282 aa7.23□□□□□ -1.25
LDB7YBL006C RPS6AP0CX37 236 aaKnown RBP7.22□□□□□ -1.25
LDB7YBL006C RPS6BP0CX38 236 aaPredicted RBP7.22□□□□□ -1.25
LDB7YBL006C AEP2P22136 580 aa7.22□□□□□ -1.25
LDB7YBL006C SGE1P33335 543 aa7.22□□□□□ -1.25
LDB7YBL006C SHM1P37292 490 aaPredicted RBP7.22□□□□□ -1.25
Retrieved 100 of 5,963 RNA–protein pairs in 75.6 ms