RNA–Protein interactions for RNA: YAL019W

FUN30, Transcript of Snf2p family member with ATP-dependent chromatin remodeling activity, yeastyeast

Gene FUN30, Length 3,396 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
FUN30YAL019W GCD6P32501 712 aaKnown RBP3.17□□□□□ -1.9
FUN30YAL019W YME2P32843 850 aa3.17□□□□□ -1.9
FUN30YAL019W NCL1P38205 684 aaKnown RBP3.17□□□□□ -1.9
FUN30YAL019W YAP1801P38856 637 aa3.17□□□□□ -1.9
FUN30YAL019W YJL206CP39529 758 aa3.17□□□□□ -1.9
FUN30YAL019W YNL320WP42840 284 aa3.17□□□□□ -1.9
FUN30YAL019W KAP114P53067 1004 aa3.17□□□□□ -1.9
FUN30YAL019W NOG2P53742 486 aaKnown RBP3.17□□□□□ -1.9
FUN30YAL019W CRD1Q07560 283 aa3.17□□□□□ -1.9
FUN30YAL019W CBC2Q08920 208 aaKnown RBP RIP-Chip data3.17□□□□□ -1.9not detected
FUN30YAL019W PMA1P05030 918 aaKnown RBP3.17□□□□□ -1.9
FUN30YAL019W YMR085WP0CF18 432 aa3.17□□□□□ -1.9
FUN30YAL019W SAM1P10659 382 aaKnown RBP3.17□□□□□ -1.9
FUN30YAL019W HMG1P12683 1054 aa3.17□□□□□ -1.9
FUN30YAL019W PHO84P25297 587 aaKnown RBP3.17□□□□□ -1.9
FUN30YAL019W BRF1P29056 596 aa3.17□□□□□ -1.9
FUN30YAL019W TGL1P34163 548 aa3.17□□□□□ -1.9
FUN30YAL019W YEL1P34225 687 aa3.17□□□□□ -1.9
FUN30YAL019W OCT1P35999 772 aa3.17□□□□□ -1.9
FUN30YAL019W RPC37P36121 282 aa3.17□□□□□ -1.9
FUN30YAL019W RRT2P38332 387 aa3.17□□□□□ -1.9
FUN30YAL019W SIT1P39980 628 aa3.17□□□□□ -1.9
FUN30YAL019W ARB1P40024 610 aaKnown RBP3.17□□□□□ -1.9
FUN30YAL019W QDR1P40475 563 aa3.17□□□□□ -1.9
FUN30YAL019W SDS3P40505 327 aa3.17□□□□□ -1.9
FUN30YAL019W MAD1P40957 749 aa3.17□□□□□ -1.9
FUN30YAL019W CNN1P43618 361 aa3.17□□□□□ -1.9
FUN30YAL019W VPS53P47061 822 aa3.17□□□□□ -1.9
FUN30YAL019W ACF4P47129 309 aa3.17□□□□□ -1.9
FUN30YAL019W HSH155P49955 971 aaKnown RBP3.17□□□□□ -1.9
FUN30YAL019W ADA2Q02336 434 aa3.17□□□□□ -1.9
FUN30YAL019W RCF1Q03713 159 aa3.17□□□□□ -1.9
FUN30YAL019W VHS3Q08438 674 aa3.17□□□□□ -1.9
FUN30YAL019W YPL191CQ08930 360 aa3.17□□□□□ -1.9
FUN30YAL019W REC8Q12188 680 aa3.17□□□□□ -1.9
FUN30YAL019W DBP5P20449 482 aaKnown RBP3.17□□□□□ -1.9
FUN30YAL019W MRPS28P21771 286 aa3.17□□□□□ -1.9
FUN30YAL019W SRM1P21827 482 aa3.17□□□□□ -1.9
FUN30YAL019W POL4P25615 582 aa3.17□□□□□ -1.9
FUN30YAL019W NFU1P32860 256 aa3.17□□□□□ -1.9
FUN30YAL019W STE13P33894 931 aa3.17□□□□□ -1.9
FUN30YAL019W APE3P37302 537 aaKnown RBP3.17□□□□□ -1.9
FUN30YAL019W VMA13P41807 478 aaKnown RBP3.17□□□□□ -1.9
FUN30YAL019W RGD2P43556 714 aa3.17□□□□□ -1.9
FUN30YAL019W GCD14P46959 383 aaPredicted RBP3.17□□□□□ -1.9
FUN30YAL019W VTC4P47075 721 aa3.17□□□□□ -1.9
FUN30YAL019W AVT1P47082 602 aa3.17□□□□□ -1.9
FUN30YAL019W RPA49Q01080 415 aaPredicted RBP3.17□□□□□ -1.9
FUN30YAL019W MEH1Q02205 184 aa3.17□□□□□ -1.9
FUN30YAL019W LGE1Q02796 332 aaKnown RBP3.17□□□□□ -1.9
FUN30YAL019W ISU1Q03020 165 aa3.17□□□□□ -1.9
FUN30YAL019W EAR1Q03212 550 aa3.17□□□□□ -1.9
FUN30YAL019W ARO80Q04052 950 aa3.17□□□□□ -1.9
FUN30YAL019W SPR28Q04921 423 aa3.17□□□□□ -1.9
FUN30YAL019W STE23Q06010 1027 aa3.17□□□□□ -1.9
FUN30YAL019W ARR2Q06597 130 aa3.17□□□□□ -1.9
FUN30YAL019W BDS1Q08347 646 aa3.17□□□□□ -1.9
FUN30YAL019W NOP56Q12460 504 aaKnown RBP RIP-Chip data3.17□□□□□ -1.9not detected
FUN30YAL019W VPS5Q92331 675 aa3.17□□□□□ -1.9
FUN30YAL019W TSC13Q99190 310 aa3.17□□□□□ -1.9
FUN30YAL019W CDC31P06704 161 aaKnown RBP3.16□□□□□ -1.9
FUN30YAL019W GCD2P12754 651 aaPredicted RBP3.16□□□□□ -1.9
FUN30YAL019W DAT1P13483 248 aaKnown RBP3.16□□□□□ -1.9
FUN30YAL019W MSS116P15424 664 aaKnown RBP3.16□□□□□ -1.9
FUN30YAL019W DAL2P25335 343 aa3.16□□□□□ -1.9
FUN30YAL019W SEG2P34250 1132 aa3.16□□□□□ -1.9
FUN30YAL019W SET5P38890 526 aaKnown RBP3.16□□□□□ -1.9
FUN30YAL019W FET4P40988 552 aa3.16□□□□□ -1.9
FUN30YAL019W AIP1P46680 615 aaKnown RBP3.16□□□□□ -1.9
FUN30YAL019W YJR115WP47152 169 aa3.16□□□□□ -1.9
FUN30YAL019W FMS1P50264 508 aa3.16□□□□□ -1.9
FUN30YAL019W MCM6P53091 1017 aaKnown RBP3.16□□□□□ -1.9
FUN30YAL019W YLR455WQ06188 304 aa3.16□□□□□ -1.9
FUN30YAL019W HDA3Q06623 655 aa3.16□□□□□ -1.9
FUN30YAL019W SHS1Q07657 551 aa3.16□□□□□ -1.9
FUN30YAL019W YLL058WQ12198 575 aa3.16□□□□□ -1.9
FUN30YAL019W MEF1P25039 761 aa3.16□□□□□ -1.9
FUN30YAL019W CNS1P33313 385 aa3.16□□□□□ -1.9
FUN30YAL019W SHP1P34223 423 aa3.16□□□□□ -1.9
FUN30YAL019W RRP1P35178 278 aaPredicted RBP3.16□□□□□ -1.9
FUN30YAL019W BEM4P39011 633 aa3.16□□□□□ -1.9
FUN30YAL019W HMF1P40037 129 aaKnown RBP3.16□□□□□ -1.9
FUN30YAL019W SPR3P41901 512 aa3.16□□□□□ -1.9
FUN30YAL019W NMD5P46970 1048 aa3.16□□□□□ -1.9
FUN30YAL019W CTR1P49573 406 aa3.16□□□□□ -1.9
FUN30YAL019W HFM1P51979 1187 aa3.16□□□□□ -1.9
FUN30YAL019W YML6P51998 286 aa3.16□□□□□ -1.9
FUN30YAL019W NBP1P52919 319 aaPredicted RBP3.16□□□□□ -1.9
FUN30YAL019W YGR125WP53273 1036 aa3.16□□□□□ -1.9
FUN30YAL019W UBP3Q01477 912 aaKnown RBP RIP-Chip data3.16□□□□□ -1.9not detected
FUN30YAL019W DON1Q05610 365 aa3.16□□□□□ -1.9
FUN30YAL019W NEW1Q08972 1196 aaKnown RBP3.16□□□□□ -1.9
FUN30YAL019W EMP46Q12396 444 aa3.16□□□□□ -1.9
FUN30YAL019W CBP1P07252 654 aa3.15□□□□□ -1.9
FUN30YAL019W HPR1P17629 752 aaKnown RBP3.15□□□□□ -1.9
FUN30YAL019W ADP1P25371 1049 aa3.15□□□□□ -1.9
FUN30YAL019W DBF4P32325 704 aa3.15□□□□□ -1.9
FUN30YAL019W MEI5P32489 222 aa3.15□□□□□ -1.9
FUN30YAL019W UTR2P32623 467 aa3.15□□□□□ -1.9
FUN30YAL019W STV1P37296 890 aa3.15□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 34.8 ms