RNA–Protein interactions for RNA: ENSMUST00000225319.1

Ssr1-204, Transcript of Translocon-associated protein subunit alpha, mousemouse

BASIC

Gene Ssr1, Length 1,610 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1-204ENSMUST00000225319 Rbm5Q91YE7 815 aaKnown RBP16.95■□□□□ 0.3
Ssr1-204ENSMUST00000225319 Cdca7lQ922M5 438 aa16.95■□□□□ 0.3
Ssr1-204ENSMUST00000225319 Irs4Q9Z0Y7 1216 aa16.95■□□□□ 0.3
Ssr1-204ENSMUST00000225319 FAM186AQ9D9R9 1790 aa16.94■□□□□ 0.3
Ssr1-204ENSMUST00000225319 Elmsan1E9Q2I4 1089 aaKnown RBP16.94■□□□□ 0.3
Ssr1-204ENSMUST00000225319 Casp1P29452 402 aa16.94■□□□□ 0.3
Ssr1-204ENSMUST00000225319 Wdhd1P59328 1117 aa16.94■□□□□ 0.3
Ssr1-204ENSMUST00000225319 MpndQ3TV65 487 aa16.94■□□□□ 0.3
Ssr1-204ENSMUST00000225319 Ddrgk1Q80WW9 315 aa16.94■□□□□ 0.3
Ssr1-204ENSMUST00000225319 Rufy3Q9D394 469 aa16.94■□□□□ 0.3
Ssr1-204ENSMUST00000225319 Gm9992B2RWK3 458 aa16.93■□□□□ 0.3
Ssr1-204ENSMUST00000225319 Kif23E9Q5G3 953 aa16.93■□□□□ 0.3
Ssr1-204ENSMUST00000225319 Cyp2d9P11714 504 aa16.93■□□□□ 0.3
Ssr1-204ENSMUST00000225319 Pla2g4fQ50L41 855 aa16.93■□□□□ 0.3
Ssr1-204ENSMUST00000225319 Unc93aQ710D3 458 aa16.93■□□□□ 0.3
Ssr1-204ENSMUST00000225319 Rps6kb1Q8BSK8 525 aa16.93■□□□□ 0.3
Ssr1-204ENSMUST00000225319 Usp42B2RQC2 1324 aaKnown RBP16.93■□□□□ 0.3
Ssr1-204ENSMUST00000225319 A0A1W2P7S8 802 aa16.92■□□□□ 0.3
Ssr1-204ENSMUST00000225319 Frmd7A2AD83 703 aa16.92■□□□□ 0.3
Ssr1-204ENSMUST00000225319 Pcdhb9E9Q5G2 828 aa16.92■□□□□ 0.3
Ssr1-204ENSMUST00000225319 Cdc5lQ6A068 802 aaKnown RBP16.92■□□□□ 0.3
Ssr1-204ENSMUST00000225319 Pram1Q6BCL1 675 aa16.92■□□□□ 0.3
Ssr1-204ENSMUST00000225319 Prl7a2O54831 253 aa16.92■□□□□ 0.3
Ssr1-204ENSMUST00000225319 Sept9Q80UG5 583 aa16.92■□□□□ 0.3
Ssr1-204ENSMUST00000225319 Gripap1Q8VD04 806 aa16.92■□□□□ 0.3
Ssr1-204ENSMUST00000225319 Tuft1O08970 390 aa16.91■□□□□ 0.3
Ssr1-204ENSMUST00000225319 Stat5bP42232 786 aa16.91■□□□□ 0.3
Ssr1-204ENSMUST00000225319 NfixP70257 488 aa16.91■□□□□ 0.3
Ssr1-204ENSMUST00000225319 Gm5592Q3V0A6 857 aa16.91■□□□□ 0.3
Ssr1-204ENSMUST00000225319 Paxip1Q6NZQ4 1056 aa16.91■□□□□ 0.3
Ssr1-204ENSMUST00000225319 Rrp12Q6P5B0 1295 aaKnown RBP16.91■□□□□ 0.3
Ssr1-204ENSMUST00000225319 Msl1Q6PDM1 616 aa16.91■□□□□ 0.3
Ssr1-204ENSMUST00000225319 Slc14a2Q8R4T9 930 aa16.91■□□□□ 0.3
Ssr1-204ENSMUST00000225319 Sept12Q9D451 317 aa16.91■□□□□ 0.3
Ssr1-204ENSMUST00000225319 Mast3Q3U214 1321 aa16.9■□□□□ 0.3
Ssr1-204ENSMUST00000225319 Irgm2A0A140LIF8 407 aa16.9■□□□□ 0.3
Ssr1-204ENSMUST00000225319 Gadd45bP22339 160 aa16.9■□□□□ 0.3
Ssr1-204ENSMUST00000225319 Pcsk7Q61139 770 aa16.9■□□□□ 0.3
Ssr1-204ENSMUST00000225319 Best3Q6H1V1 669 aa16.9■□□□□ 0.3
Ssr1-204ENSMUST00000225319 Tubb6Q922F4 447 aa16.9■□□□□ 0.3
Ssr1-204ENSMUST00000225319 CpdO89001 1377 aa16.89■□□□□ 0.29
Ssr1-204ENSMUST00000225319 Pkp1P97350 728 aaKnown RBP16.89■□□□□ 0.29
Ssr1-204ENSMUST00000225319 ErmnQ5EBJ4 281 aa16.89■□□□□ 0.29
Ssr1-204ENSMUST00000225319 Krt40Q6IFX3 439 aa16.89■□□□□ 0.29
Ssr1-204ENSMUST00000225319 Rbm15bQ6PHZ5 887 aaKnown RBP16.89■□□□□ 0.29
Ssr1-204ENSMUST00000225319 Olfm5Q8BU90 496 aa16.89■□□□□ 0.29
Ssr1-204ENSMUST00000225319 Atad2Q8CDM1 1040 aa16.89■□□□□ 0.29
Ssr1-204ENSMUST00000225319 Col23a1Q8K4G2 532 aa16.89■□□□□ 0.29
Ssr1-204ENSMUST00000225319 Rrp9Q91WM3 475 aaKnown RBP16.89■□□□□ 0.29
Ssr1-204ENSMUST00000225319 Syce3B5KM66 88 aa16.88■□□□□ 0.29
Ssr1-204ENSMUST00000225319 Syt1P46096 421 aa16.88■□□□□ 0.29
Ssr1-204ENSMUST00000225319 Tmem67Q8BR76 992 aa16.88■□□□□ 0.29
Ssr1-204ENSMUST00000225319 Kdm4aQ8BW72 1064 aa16.88■□□□□ 0.29
Ssr1-204ENSMUST00000225319 WdpcpQ8C456 722 aa16.88■□□□□ 0.29
Ssr1-204ENSMUST00000225319 Ccar2Q8VDP4 922 aaKnown RBP16.88■□□□□ 0.29
Ssr1-204ENSMUST00000225319 Chmp4cQ9D7F7 232 aa16.88■□□□□ 0.29
Ssr1-204ENSMUST00000225319 Wdr93Q402B2 695 aa16.88■□□□□ 0.29
Ssr1-204ENSMUST00000225319 Cpa2Q504N0 417 aa16.88■□□□□ 0.29
Ssr1-204ENSMUST00000225319 Tex2Q6ZPJ0 1128 aaKnown RBP16.88■□□□□ 0.29
Ssr1-204ENSMUST00000225319 Shisa4Q8CA71 197 aa16.88■□□□□ 0.29
Ssr1-204ENSMUST00000225319 ImmtQ8CAQ8 757 aaKnown RBP16.88■□□□□ 0.29
Ssr1-204ENSMUST00000225319 Smc3Q9CW03 1217 aaKnown RBP16.88■□□□□ 0.29
Ssr1-204ENSMUST00000225319 MthfsQ9D110 203 aa16.88■□□□□ 0.29
Ssr1-204ENSMUST00000225319 Mrpl12Q9DB15 201 aaKnown RBP16.88■□□□□ 0.29
Ssr1-204ENSMUST00000225319 Chd5A2A8L1 1946 aa16.87■□□□□ 0.29
Ssr1-204ENSMUST00000225319 Ppp1r21Q3TDD9 780 aa16.87■□□□□ 0.29
Ssr1-204ENSMUST00000225319 Prom2Q3UUY6 835 aa16.87■□□□□ 0.29
Ssr1-204ENSMUST00000225319 ErfeQ6PGN1 340 aa16.87■□□□□ 0.29
Ssr1-204ENSMUST00000225319 Ccdc158Q8CDI6 1109 aa16.87■□□□□ 0.29
Ssr1-204ENSMUST00000225319 Fez1Q8K0X8 392 aa16.87■□□□□ 0.29
Ssr1-204ENSMUST00000225319 Pof1bQ8K4L4 587 aa16.87■□□□□ 0.29
Ssr1-204ENSMUST00000225319 Mrpl50Q8VDT9 159 aaKnown RBP16.87■□□□□ 0.29
Ssr1-204ENSMUST00000225319 IcoslgQ9JHJ8 322 aa16.87■□□□□ 0.29
Ssr1-204ENSMUST00000225319 Rgs17Q9QZB0 210 aa16.87■□□□□ 0.29
Ssr1-204ENSMUST00000225319 Pde3aQ9Z0X4 1141 aa16.87■□□□□ 0.29
Ssr1-204ENSMUST00000225319 Gnat2P50149 354 aa16.86■□□□□ 0.29
Ssr1-204ENSMUST00000225319 Exosc10P56960 887 aaKnown RBP16.86■□□□□ 0.29
Ssr1-204ENSMUST00000225319 Siah1aP61092 282 aa16.86■□□□□ 0.29
Ssr1-204ENSMUST00000225319 Washc4Q3UMB9 1173 aa16.86■□□□□ 0.29
Ssr1-204ENSMUST00000225319 Rassf8Q8CJ96 419 aa16.86■□□□□ 0.29
Ssr1-204ENSMUST00000225319 Cxcl11Q9JHH5 100 aa16.86■□□□□ 0.29
Ssr1-204ENSMUST00000225319 Stx6Q9JKK1 255 aa16.86■□□□□ 0.29
Ssr1-204ENSMUST00000225319 Itgb4A2A863 1818 aa16.86■□□□□ 0.29
Ssr1-204ENSMUST00000225319 Spg7Q3ULF4 781 aa16.85■□□□□ 0.29
Ssr1-204ENSMUST00000225319 Fhdc1Q3ULZ2 1149 aa16.85■□□□□ 0.29
Ssr1-204ENSMUST00000225319 Ccdc51Q3URS9 406 aa16.85■□□□□ 0.29
Ssr1-204ENSMUST00000225319 Zfp804bA0A0G2JGH6 1343 aa16.85■□□□□ 0.29
Ssr1-204ENSMUST00000225319 Zfp831A2ADM8 1628 aa16.85■□□□□ 0.29
Ssr1-204ENSMUST00000225319 Pald1P70261 859 aa16.85■□□□□ 0.29
Ssr1-204ENSMUST00000225319 Gm21985Q6P6P5 1106 aa16.85■□□□□ 0.29
Ssr1-204ENSMUST00000225319 WaslQ91YD9 501 aa16.85■□□□□ 0.29
Ssr1-204ENSMUST00000225319 Pla2g12bQ99P27 195 aa16.85■□□□□ 0.29
Ssr1-204ENSMUST00000225319 Krt24A1L317 512 aa16.84■□□□□ 0.29
Ssr1-204ENSMUST00000225319 Zbtb7aO88939 569 aaKnown RBP16.84■□□□□ 0.29
Ssr1-204ENSMUST00000225319 F2rP30558 430 aa16.84■□□□□ 0.29
Ssr1-204ENSMUST00000225319 Tmed8Q3UHI4 326 aa16.84■□□□□ 0.29
Ssr1-204ENSMUST00000225319 Kif22Q3V300 660 aa16.84■□□□□ 0.29
Ssr1-204ENSMUST00000225319 Cyp24a1Q64441 514 aa16.84■□□□□ 0.29
Ssr1-204ENSMUST00000225319 Pdcl2Q78Y63 240 aa16.84■□□□□ 0.29
Ssr1-204ENSMUST00000225319 Ncaph2Q8BSP2 607 aa16.84■□□□□ 0.29
Retrieved 100 of 22,080 RNA–protein pairs in 19.3 ms