Protein–RNA interactions for Protein: Q3ULF4

Spg7, Paraplegin, mousemouse

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg7Q3ULF4 Gm25239-201ENSMUST00000174915 86 ntBASIC46,63■■■■■ 5,06
Spg7Q3ULF4 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC43,1■■■■■ 4,49
Spg7Q3ULF4 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC42,58■■■■■ 4,41
Spg7Q3ULF4 Gm15042-201ENSMUST00000120212 883 ntBASIC40,77■■■■■ 4,12
Spg7Q3ULF4 Gm24109-201ENSMUST00000175489 103 ntBASIC40,36■■■■■ 4,05
Spg7Q3ULF4 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC39,84■■■■□ 3,97
Spg7Q3ULF4 Gm15045-201ENSMUST00000117359 883 ntBASIC39,83■■■■□ 3,97
Spg7Q3ULF4 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC39,59■■■■□ 3,93
Spg7Q3ULF4 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC39,38■■■■□ 3,89
Spg7Q3ULF4 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC39,25■■■■□ 3,87
Spg7Q3ULF4 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC39,24■■■■□ 3,87
Spg7Q3ULF4 Gm23366-201ENSMUST00000175022 89 ntBASIC38,99■■■■□ 3,83
Spg7Q3ULF4 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC38,76■■■■□ 3,8
Spg7Q3ULF4 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC38,63■■■■□ 3,77
Spg7Q3ULF4 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC38,07■■■■□ 3,68
Spg7Q3ULF4 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC37,82■■■■□ 3,64
Spg7Q3ULF4 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC37,68■■■■□ 3,62
Spg7Q3ULF4 AC153911.1-202ENSMUST00000218534 1034 ntBASIC37,65■■■■□ 3,62
Spg7Q3ULF4 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC37,64■■■■□ 3,62
Spg7Q3ULF4 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC37,6■■■■□ 3,61
Spg7Q3ULF4 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC37,42■■■■□ 3,58
Spg7Q3ULF4 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC37,39■■■■□ 3,58
Spg7Q3ULF4 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC37,28■■■■□ 3,56
Spg7Q3ULF4 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC37,18■■■■□ 3,54
Spg7Q3ULF4 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC37,09■■■■□ 3,53
Spg7Q3ULF4 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC37,07■■■■□ 3,52
Spg7Q3ULF4 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC37,05■■■■□ 3,52
Spg7Q3ULF4 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC37,04■■■■□ 3,52
Spg7Q3ULF4 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC36,96■■■■□ 3,51
Spg7Q3ULF4 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC36,95■■■■□ 3,51
Spg7Q3ULF4 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC36,88■■■■□ 3,49
Spg7Q3ULF4 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC36,85■■■■□ 3,49
Spg7Q3ULF4 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC36,84■■■■□ 3,49
Spg7Q3ULF4 Gm25238-201ENSMUST00000174914 89 ntBASIC36,79■■■■□ 3,48
Spg7Q3ULF4 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC36,7■■■■□ 3,47
Spg7Q3ULF4 Psd-208ENSMUST00000224556 2034 ntBASIC36,61■■■■□ 3,45
Spg7Q3ULF4 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC36,55■■■■□ 3,44
Spg7Q3ULF4 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC36,21■■■■□ 3,39
Spg7Q3ULF4 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC36,14■■■■□ 3,38
Spg7Q3ULF4 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC36,04■■■■□ 3,36
Spg7Q3ULF4 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC35,94■■■■□ 3,34
Spg7Q3ULF4 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC35,84■■■■□ 3,33
Spg7Q3ULF4 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC35,84■■■■□ 3,33
Spg7Q3ULF4 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC35,81■■■■□ 3,32
Spg7Q3ULF4 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC35,74■■■■□ 3,31
Spg7Q3ULF4 Gm27325-201ENSMUST00000175467 74 ntBASIC35,74■■■■□ 3,31
Spg7Q3ULF4 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC35,68■■■■□ 3,3
Spg7Q3ULF4 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC35,68■■■■□ 3,3
Spg7Q3ULF4 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC35,65■■■■□ 3,3
Spg7Q3ULF4 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC35,59■■■■□ 3,29
Spg7Q3ULF4 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC35,54■■■■□ 3,28
Spg7Q3ULF4 Gm25262-201ENSMUST00000174934 133 ntBASIC35,3■■■■□ 3,24
Spg7Q3ULF4 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC35,23■■■■□ 3,23
Spg7Q3ULF4 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC35,23■■■■□ 3,23
Spg7Q3ULF4 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC35,23■■■■□ 3,23
Spg7Q3ULF4 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC35,22■■■■□ 3,23
Spg7Q3ULF4 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC35,21■■■■□ 3,23
Spg7Q3ULF4 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC35,1■■■■□ 3,21
Spg7Q3ULF4 Rab21-202ENSMUST00000218831 843 ntBASIC35,1■■■■□ 3,21
Spg7Q3ULF4 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC35,1■■■■□ 3,21
Spg7Q3ULF4 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC35■■■■□ 3,19
Spg7Q3ULF4 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC34,92■■■■□ 3,18
Spg7Q3ULF4 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC34,88■■■■□ 3,17
Spg7Q3ULF4 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC34,84■■■■□ 3,17
Spg7Q3ULF4 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC34,81■■■■□ 3,16
Spg7Q3ULF4 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC34,75■■■■□ 3,15
Spg7Q3ULF4 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC34,71■■■■□ 3,15
Spg7Q3ULF4 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC34,66■■■■□ 3,14
Spg7Q3ULF4 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC34,66■■■■□ 3,14
Spg7Q3ULF4 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC34,66■■■■□ 3,14
Spg7Q3ULF4 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC34,65■■■■□ 3,14
Spg7Q3ULF4 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC34,63■■■■□ 3,13
Spg7Q3ULF4 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC34,61■■■■□ 3,13
Spg7Q3ULF4 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC34,59■■■■□ 3,13
Spg7Q3ULF4 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC34,59■■■■□ 3,13
Spg7Q3ULF4 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC34,57■■■■□ 3,12
Spg7Q3ULF4 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC34,57■■■■□ 3,12
Spg7Q3ULF4 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC34,53■■■■□ 3,12
Spg7Q3ULF4 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC34,52■■■■□ 3,12
Spg7Q3ULF4 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC34,51■■■■□ 3,12
Spg7Q3ULF4 Gm10524-201ENSMUST00000181931 1893 ntBASIC34,5■■■■□ 3,11
Spg7Q3ULF4 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC34,45■■■■□ 3,11
Spg7Q3ULF4 Gm26115-201ENSMUST00000175605 87 ntBASIC34,42■■■■□ 3,1
Spg7Q3ULF4 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC34,41■■■■□ 3,1
Spg7Q3ULF4 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC34,34■■■■□ 3,09
Spg7Q3ULF4 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC34,33■■■■□ 3,09
Spg7Q3ULF4 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC34,3■■■■□ 3,08
Spg7Q3ULF4 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC34,26■■■■□ 3,08
Spg7Q3ULF4 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC34,25■■■■□ 3,07
Spg7Q3ULF4 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC34,24■■■■□ 3,07
Spg7Q3ULF4 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC34,24■■■■□ 3,07
Spg7Q3ULF4 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC34,22■■■■□ 3,07
Spg7Q3ULF4 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC34,19■■■■□ 3,06
Spg7Q3ULF4 CT025624.2-201ENSMUST00000223609 1909 ntBASIC34,19■■■■□ 3,06
Spg7Q3ULF4 Gm8109-201ENSMUST00000194076 746 ntBASIC34,18■■■■□ 3,06
Spg7Q3ULF4 Gm42596-201ENSMUST00000196305 1958 ntBASIC34,1■■■■□ 3,05
Spg7Q3ULF4 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC34,09■■■■□ 3,05
Spg7Q3ULF4 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC34,09■■■■□ 3,05
Spg7Q3ULF4 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC34,03■■■■□ 3,04
Spg7Q3ULF4 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC34,01■■■■□ 3,03
Retrieved 100 of 76,532 protein–RNA pairs in 42,2 ms