Protein–RNA interactions for Protein: Q6H1V1

Best3, Bestrophin-3, mousemouse

Predictions only

Length 669 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best3Q6H1V1 Gm25239-201ENSMUST00000174915 86 ntBASIC47.81■■■■■ 5.24
Best3Q6H1V1 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC44.31■■■■■ 4.68
Best3Q6H1V1 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC43.66■■■■■ 4.58
Best3Q6H1V1 Gm24109-201ENSMUST00000175489 103 ntBASIC41.58■■■■■ 4.25
Best3Q6H1V1 Gm15042-201ENSMUST00000120212 883 ntBASIC41.55■■■■■ 4.24
Best3Q6H1V1 Gm15045-201ENSMUST00000117359 883 ntBASIC40.65■■■■■ 4.1
Best3Q6H1V1 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC40.41■■■■■ 4.06
Best3Q6H1V1 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC40.36■■■■■ 4.05
Best3Q6H1V1 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC40.16■■■■■ 4.02
Best3Q6H1V1 Gm23366-201ENSMUST00000175022 89 ntBASIC39.89■■■■□ 3.98
Best3Q6H1V1 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC39.71■■■■□ 3.95
Best3Q6H1V1 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC39.64■■■■□ 3.94
Best3Q6H1V1 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC39.17■■■■□ 3.86
Best3Q6H1V1 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC38.84■■■■□ 3.81
Best3Q6H1V1 AC153911.1-202ENSMUST00000218534 1034 ntBASIC38.8■■■■□ 3.8
Best3Q6H1V1 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC38.5■■■■□ 3.75
Best3Q6H1V1 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC38.45■■■■□ 3.75
Best3Q6H1V1 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC38.44■■■■□ 3.74
Best3Q6H1V1 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC38.39■■■■□ 3.74
Best3Q6H1V1 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC38.31■■■■□ 3.72
Best3Q6H1V1 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC38.03■■■■□ 3.68
Best3Q6H1V1 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC37.99■■■■□ 3.67
Best3Q6H1V1 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC37.93■■■■□ 3.66
Best3Q6H1V1 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC37.92■■■■□ 3.66
Best3Q6H1V1 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC37.88■■■■□ 3.65
Best3Q6H1V1 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC37.83■■■■□ 3.65
Best3Q6H1V1 Gm25238-201ENSMUST00000174914 89 ntBASIC37.83■■■■□ 3.65
Best3Q6H1V1 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC37.82■■■■□ 3.65
Best3Q6H1V1 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC37.82■■■■□ 3.64
Best3Q6H1V1 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC37.62■■■■□ 3.61
Best3Q6H1V1 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC37.42■■■■□ 3.58
Best3Q6H1V1 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC37.4■■■■□ 3.58
Best3Q6H1V1 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC37.24■■■■□ 3.55
Best3Q6H1V1 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC37.12■■■■□ 3.53
Best3Q6H1V1 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC37.06■■■■□ 3.52
Best3Q6H1V1 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC36.82■■■■□ 3.48
Best3Q6H1V1 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC36.81■■■■□ 3.48
Best3Q6H1V1 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC36.75■■■■□ 3.47
Best3Q6H1V1 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC36.74■■■■□ 3.47
Best3Q6H1V1 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC36.67■■■■□ 3.46
Best3Q6H1V1 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC36.66■■■■□ 3.46
Best3Q6H1V1 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC36.66■■■■□ 3.46
Best3Q6H1V1 Gm27325-201ENSMUST00000175467 74 ntBASIC36.41■■■■□ 3.42
Best3Q6H1V1 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC36.41■■■■□ 3.42
Best3Q6H1V1 Psd-208ENSMUST00000224556 2034 ntBASIC36.32■■■■□ 3.41
Best3Q6H1V1 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC36.31■■■■□ 3.4
Best3Q6H1V1 Gm25262-201ENSMUST00000174934 133 ntBASIC36.31■■■■□ 3.4
Best3Q6H1V1 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC36.18■■■■□ 3.38
Best3Q6H1V1 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC35.96■■■■□ 3.35
Best3Q6H1V1 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC35.92■■■■□ 3.34
Best3Q6H1V1 Rab21-202ENSMUST00000218831 843 ntBASIC35.89■■■■□ 3.34
Best3Q6H1V1 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC35.85■■■■□ 3.33
Best3Q6H1V1 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC35.8■■■■□ 3.32
Best3Q6H1V1 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC35.79■■■■□ 3.32
Best3Q6H1V1 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC35.72■■■■□ 3.31
Best3Q6H1V1 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC35.68■■■■□ 3.3
Best3Q6H1V1 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC35.65■■■■□ 3.3
Best3Q6H1V1 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC35.63■■■■□ 3.29
Best3Q6H1V1 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC35.6■■■■□ 3.29
Best3Q6H1V1 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC35.58■■■■□ 3.29
Best3Q6H1V1 Gm26115-201ENSMUST00000175605 87 ntBASIC35.51■■■■□ 3.28
Best3Q6H1V1 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC35.49■■■■□ 3.27
Best3Q6H1V1 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC35.47■■■■□ 3.27
Best3Q6H1V1 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC35.46■■■■□ 3.27
Best3Q6H1V1 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC35.45■■■■□ 3.27
Best3Q6H1V1 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC35.42■■■■□ 3.26
Best3Q6H1V1 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC35.37■■■■□ 3.25
Best3Q6H1V1 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC35.35■■■■□ 3.25
Best3Q6H1V1 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC35.33■■■■□ 3.25
Best3Q6H1V1 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC35.32■■■■□ 3.24
Best3Q6H1V1 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC35.27■■■■□ 3.24
Best3Q6H1V1 Gm8109-201ENSMUST00000194076 746 ntBASIC35.27■■■■□ 3.24
Best3Q6H1V1 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC35.23■■■■□ 3.23
Best3Q6H1V1 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC35.15■■■■□ 3.22
Best3Q6H1V1 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC35.14■■■■□ 3.22
Best3Q6H1V1 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC35.13■■■■□ 3.21
Best3Q6H1V1 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC35.11■■■■□ 3.21
Best3Q6H1V1 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC35.05■■■■□ 3.2
Best3Q6H1V1 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC35.05■■■■□ 3.2
Best3Q6H1V1 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC34.98■■■■□ 3.19
Best3Q6H1V1 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC34.95■■■■□ 3.19
Best3Q6H1V1 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC34.94■■■■□ 3.18
Best3Q6H1V1 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC34.9■■■■□ 3.18
Best3Q6H1V1 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC34.89■■■■□ 3.18
Best3Q6H1V1 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC34.86■■■■□ 3.17
Best3Q6H1V1 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC34.86■■■■□ 3.17
Best3Q6H1V1 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC34.82■■■■□ 3.16
Best3Q6H1V1 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC34.7■■■■□ 3.15
Best3Q6H1V1 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC34.7■■■■□ 3.14
Best3Q6H1V1 Gm17082-201ENSMUST00000166043 1091 ntBASIC34.66■■■■□ 3.14
Best3Q6H1V1 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC34.65■■■■□ 3.14
Best3Q6H1V1 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC34.6■■■■□ 3.13
Best3Q6H1V1 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC34.57■■■■□ 3.12
Best3Q6H1V1 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC34.57■■■■□ 3.12
Best3Q6H1V1 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC34.54■■■■□ 3.12
Best3Q6H1V1 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC34.54■■■■□ 3.12
Best3Q6H1V1 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC34.46■■■■□ 3.11
Best3Q6H1V1 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC34.44■■■■□ 3.1
Best3Q6H1V1 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC34.42■■■■□ 3.1
Best3Q6H1V1 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC34.39■■■■□ 3.1
Retrieved 100 of 76,532 protein–RNA pairs in 12.9 ms