Protein–RNA interactions for Protein: Q8CA71

Shisa4, Protein shisa-4, mousemouse

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa4Q8CA71 Gm25239-201ENSMUST00000174915 86 ntBASIC44,35■■■■■ 4,69
Shisa4Q8CA71 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC40,84■■■■■ 4,13
Shisa4Q8CA71 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC40,32■■■■■ 4,05
Shisa4Q8CA71 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC40,17■■■■■ 4,02
Shisa4Q8CA71 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC39,28■■■■□ 3,88
Shisa4Q8CA71 Gm15042-201ENSMUST00000120212 883 ntBASIC39,06■■■■□ 3,84
Shisa4Q8CA71 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC38,9■■■■□ 3,82
Shisa4Q8CA71 Gm15045-201ENSMUST00000117359 883 ntBASIC38,42■■■■□ 3,74
Shisa4Q8CA71 Gm24109-201ENSMUST00000175489 103 ntBASIC38,39■■■■□ 3,74
Shisa4Q8CA71 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC37,65■■■■□ 3,62
Shisa4Q8CA71 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC37,6■■■■□ 3,61
Shisa4Q8CA71 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC37,39■■■■□ 3,58
Shisa4Q8CA71 Psd-208ENSMUST00000224556 2034 ntBASIC37,39■■■■□ 3,58
Shisa4Q8CA71 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC37,13■■■■□ 3,53
Shisa4Q8CA71 Gm23366-201ENSMUST00000175022 89 ntBASIC36,96■■■■□ 3,51
Shisa4Q8CA71 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC36,87■■■■□ 3,49
Shisa4Q8CA71 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC36,83■■■■□ 3,49
Shisa4Q8CA71 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC36,76■■■■□ 3,47
Shisa4Q8CA71 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC36,73■■■■□ 3,47
Shisa4Q8CA71 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC36,61■■■■□ 3,45
Shisa4Q8CA71 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC36,58■■■■□ 3,45
Shisa4Q8CA71 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC36,54■■■■□ 3,44
Shisa4Q8CA71 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC36,43■■■■□ 3,42
Shisa4Q8CA71 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC36,34■■■■□ 3,41
Shisa4Q8CA71 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC36,25■■■■□ 3,39
Shisa4Q8CA71 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC36,25■■■■□ 3,39
Shisa4Q8CA71 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC36,13■■■■□ 3,37
Shisa4Q8CA71 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC35,96■■■■□ 3,35
Shisa4Q8CA71 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC35,93■■■■□ 3,34
Shisa4Q8CA71 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC35,93■■■■□ 3,34
Shisa4Q8CA71 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC35,92■■■■□ 3,34
Shisa4Q8CA71 AC153911.1-202ENSMUST00000218534 1034 ntBASIC35,83■■■■□ 3,33
Shisa4Q8CA71 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC35,65■■■■□ 3,3
Shisa4Q8CA71 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC35,58■■■■□ 3,29
Shisa4Q8CA71 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC35,5■■■■□ 3,27
Shisa4Q8CA71 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC35,37■■■■□ 3,25
Shisa4Q8CA71 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC35,27■■■■□ 3,24
Shisa4Q8CA71 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC35,27■■■■□ 3,24
Shisa4Q8CA71 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC35,23■■■■□ 3,23
Shisa4Q8CA71 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC35,18■■■■□ 3,22
Shisa4Q8CA71 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC35,18■■■■□ 3,22
Shisa4Q8CA71 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC35,09■■■■□ 3,21
Shisa4Q8CA71 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC35,06■■■■□ 3,2
Shisa4Q8CA71 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC35,05■■■■□ 3,2
Shisa4Q8CA71 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC35,02■■■■□ 3,2
Shisa4Q8CA71 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC35,01■■■■□ 3,2
Shisa4Q8CA71 Gm25238-201ENSMUST00000174914 89 ntBASIC34,97■■■■□ 3,19
Shisa4Q8CA71 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC34,91■■■■□ 3,18
Shisa4Q8CA71 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC34,84■■■■□ 3,17
Shisa4Q8CA71 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC34,68■■■■□ 3,14
Shisa4Q8CA71 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC34,66■■■■□ 3,14
Shisa4Q8CA71 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC34,65■■■■□ 3,14
Shisa4Q8CA71 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC34,64■■■■□ 3,14
Shisa4Q8CA71 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC34,45■■■■□ 3,11
Shisa4Q8CA71 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC34,45■■■■□ 3,11
Shisa4Q8CA71 Gm10524-201ENSMUST00000181931 1893 ntBASIC34,36■■■■□ 3,09
Shisa4Q8CA71 Gm27325-201ENSMUST00000175467 74 ntBASIC34,35■■■■□ 3,09
Shisa4Q8CA71 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC34,33■■■■□ 3,09
Shisa4Q8CA71 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC34,25■■■■□ 3,07
Shisa4Q8CA71 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC34,23■■■■□ 3,07
Shisa4Q8CA71 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC34,15■■■■□ 3,06
Shisa4Q8CA71 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC34,13■■■■□ 3,05
Shisa4Q8CA71 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC34,1■■■■□ 3,05
Shisa4Q8CA71 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC34,09■■■■□ 3,05
Shisa4Q8CA71 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC34,07■■■■□ 3,04
Shisa4Q8CA71 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC34,04■■■■□ 3,04
Shisa4Q8CA71 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC33,95■■■■□ 3,02
Shisa4Q8CA71 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC33,91■■■■□ 3,02
Shisa4Q8CA71 Gm42596-201ENSMUST00000196305 1958 ntBASIC33,9■■■■□ 3,02
Shisa4Q8CA71 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC33,9■■■■□ 3,02
Shisa4Q8CA71 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC33,88■■■■□ 3,01
Shisa4Q8CA71 CT025624.2-201ENSMUST00000223609 1909 ntBASIC33,86■■■■□ 3,01
Shisa4Q8CA71 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC33,81■■■■□ 3
Shisa4Q8CA71 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC33,8■■■■□ 3
Shisa4Q8CA71 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC33,77■■■■□ 3
Shisa4Q8CA71 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC33,75■■■□□ 2,99
Shisa4Q8CA71 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC33,75■■■□□ 2,99
Shisa4Q8CA71 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC33,69■■■□□ 2,98
Shisa4Q8CA71 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC33,68■■■□□ 2,98
Shisa4Q8CA71 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC33,56■■■□□ 2,96
Shisa4Q8CA71 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC33,55■■■□□ 2,96
Shisa4Q8CA71 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC33,52■■■□□ 2,96
Shisa4Q8CA71 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC33,46■■■□□ 2,95
Shisa4Q8CA71 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC33,41■■■□□ 2,94
Shisa4Q8CA71 Rab21-202ENSMUST00000218831 843 ntBASIC33,4■■■□□ 2,94
Shisa4Q8CA71 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC33,36■■■□□ 2,93
Shisa4Q8CA71 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC33,28■■■□□ 2,92
Shisa4Q8CA71 Gm25262-201ENSMUST00000174934 133 ntBASIC33,24■■■□□ 2,91
Shisa4Q8CA71 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC33,23■■■□□ 2,91
Shisa4Q8CA71 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC33,23■■■□□ 2,91
Shisa4Q8CA71 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC33,22■■■□□ 2,91
Shisa4Q8CA71 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC33,2■■■□□ 2,91
Shisa4Q8CA71 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC33,18■■■□□ 2,9
Shisa4Q8CA71 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC33,15■■■□□ 2,9
Shisa4Q8CA71 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC33,13■■■□□ 2,89
Shisa4Q8CA71 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC33,13■■■□□ 2,89
Shisa4Q8CA71 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC33,12■■■□□ 2,89
Shisa4Q8CA71 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC33,11■■■□□ 2,89
Shisa4Q8CA71 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC33,08■■■□□ 2,89
Shisa4Q8CA71 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC33,06■■■□□ 2,88
Retrieved 100 of 76,532 protein–RNA pairs in 9,4 ms