Protein–RNA interactions for Protein: Q8BSP2

Ncaph2, Condensin-2 complex subunit H2, mousemouse

Predictions only

Length 607 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ncaph2Q8BSP2 Gm25239-201ENSMUST00000174915 86 ntBASIC43.29■■■■■ 4.52
Ncaph2Q8BSP2 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC40.3■■■■■ 4.04
Ncaph2Q8BSP2 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC39.74■■■■□ 3.95
Ncaph2Q8BSP2 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC39.26■■■■□ 3.88
Ncaph2Q8BSP2 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC39.25■■■■□ 3.87
Ncaph2Q8BSP2 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC38.96■■■■□ 3.83
Ncaph2Q8BSP2 Gm15042-201ENSMUST00000120212 883 ntBASIC38.42■■■■□ 3.74
Ncaph2Q8BSP2 Gm15045-201ENSMUST00000117359 883 ntBASIC37.7■■■■□ 3.63
Ncaph2Q8BSP2 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC37.56■■■■□ 3.6
Ncaph2Q8BSP2 Psd-208ENSMUST00000224556 2034 ntBASIC37.43■■■■□ 3.58
Ncaph2Q8BSP2 Gm24109-201ENSMUST00000175489 103 ntBASIC37.27■■■■□ 3.56
Ncaph2Q8BSP2 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC37.01■■■■□ 3.51
Ncaph2Q8BSP2 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC36.88■■■■□ 3.49
Ncaph2Q8BSP2 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC36.86■■■■□ 3.49
Ncaph2Q8BSP2 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC36.79■■■■□ 3.48
Ncaph2Q8BSP2 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC36.5■■■■□ 3.43
Ncaph2Q8BSP2 Gm23366-201ENSMUST00000175022 89 ntBASIC36.24■■■■□ 3.39
Ncaph2Q8BSP2 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC36.21■■■■□ 3.39
Ncaph2Q8BSP2 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC36.16■■■■□ 3.38
Ncaph2Q8BSP2 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC36.14■■■■□ 3.38
Ncaph2Q8BSP2 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC36.12■■■■□ 3.37
Ncaph2Q8BSP2 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC36.1■■■■□ 3.37
Ncaph2Q8BSP2 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC36.07■■■■□ 3.36
Ncaph2Q8BSP2 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC36.04■■■■□ 3.36
Ncaph2Q8BSP2 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC36.02■■■■□ 3.36
Ncaph2Q8BSP2 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC35.97■■■■□ 3.35
Ncaph2Q8BSP2 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC35.94■■■■□ 3.34
Ncaph2Q8BSP2 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC35.89■■■■□ 3.34
Ncaph2Q8BSP2 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC35.79■■■■□ 3.32
Ncaph2Q8BSP2 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC35.79■■■■□ 3.32
Ncaph2Q8BSP2 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC35.59■■■■□ 3.29
Ncaph2Q8BSP2 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC35.53■■■■□ 3.28
Ncaph2Q8BSP2 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC35.41■■■■□ 3.26
Ncaph2Q8BSP2 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC35.35■■■■□ 3.25
Ncaph2Q8BSP2 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC35.31■■■■□ 3.24
Ncaph2Q8BSP2 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC35.3■■■■□ 3.24
Ncaph2Q8BSP2 AC153911.1-202ENSMUST00000218534 1034 ntBASIC35.24■■■■□ 3.23
Ncaph2Q8BSP2 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC35.11■■■■□ 3.21
Ncaph2Q8BSP2 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC35■■■■□ 3.19
Ncaph2Q8BSP2 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC34.89■■■■□ 3.18
Ncaph2Q8BSP2 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC34.88■■■■□ 3.17
Ncaph2Q8BSP2 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC34.68■■■■□ 3.14
Ncaph2Q8BSP2 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC34.51■■■■□ 3.12
Ncaph2Q8BSP2 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC34.48■■■■□ 3.11
Ncaph2Q8BSP2 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC34.48■■■■□ 3.11
Ncaph2Q8BSP2 Gm10524-201ENSMUST00000181931 1893 ntBASIC34.47■■■■□ 3.11
Ncaph2Q8BSP2 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC34.4■■■■□ 3.1
Ncaph2Q8BSP2 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC34.38■■■■□ 3.09
Ncaph2Q8BSP2 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC34.33■■■■□ 3.09
Ncaph2Q8BSP2 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC34.21■■■■□ 3.07
Ncaph2Q8BSP2 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC34.17■■■■□ 3.06
Ncaph2Q8BSP2 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC34.14■■■■□ 3.06
Ncaph2Q8BSP2 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC34.1■■■■□ 3.05
Ncaph2Q8BSP2 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC34.07■■■■□ 3.05
Ncaph2Q8BSP2 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC34.01■■■■□ 3.04
Ncaph2Q8BSP2 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC34■■■■□ 3.03
Ncaph2Q8BSP2 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC34■■■■□ 3.03
Ncaph2Q8BSP2 Gm25238-201ENSMUST00000174914 89 ntBASIC33.98■■■■□ 3.03
Ncaph2Q8BSP2 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC33.96■■■■□ 3.03
Ncaph2Q8BSP2 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC33.88■■■■□ 3.01
Ncaph2Q8BSP2 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC33.87■■■■□ 3.01
Ncaph2Q8BSP2 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC33.82■■■■□ 3
Ncaph2Q8BSP2 Gm27325-201ENSMUST00000175467 74 ntBASIC33.8■■■■□ 3
Ncaph2Q8BSP2 CT025624.2-201ENSMUST00000223609 1909 ntBASIC33.79■■■■□ 3
Ncaph2Q8BSP2 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC33.79■■■■□ 3
Ncaph2Q8BSP2 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC33.77■■■■□ 3
Ncaph2Q8BSP2 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC33.73■■■□□ 2.99
Ncaph2Q8BSP2 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC33.71■■■□□ 2.99
Ncaph2Q8BSP2 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC33.7■■■□□ 2.98
Ncaph2Q8BSP2 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC33.67■■■□□ 2.98
Ncaph2Q8BSP2 Gm42596-201ENSMUST00000196305 1958 ntBASIC33.67■■■□□ 2.98
Ncaph2Q8BSP2 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC33.56■■■□□ 2.96
Ncaph2Q8BSP2 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC33.46■■■□□ 2.95
Ncaph2Q8BSP2 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC33.38■■■□□ 2.93
Ncaph2Q8BSP2 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC33.35■■■□□ 2.93
Ncaph2Q8BSP2 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC33.33■■■□□ 2.93
Ncaph2Q8BSP2 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC33.28■■■□□ 2.92
Ncaph2Q8BSP2 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC33.1■■■□□ 2.89
Ncaph2Q8BSP2 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC33.1■■■□□ 2.89
Ncaph2Q8BSP2 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC33.1■■■□□ 2.89
Ncaph2Q8BSP2 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC33.09■■■□□ 2.89
Ncaph2Q8BSP2 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC33.07■■■□□ 2.88
Ncaph2Q8BSP2 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC33.07■■■□□ 2.88
Ncaph2Q8BSP2 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC33.07■■■□□ 2.88
Ncaph2Q8BSP2 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC33.05■■■□□ 2.88
Ncaph2Q8BSP2 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC33.04■■■□□ 2.88
Ncaph2Q8BSP2 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC33.03■■■□□ 2.88
Ncaph2Q8BSP2 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC33.02■■■□□ 2.88
Ncaph2Q8BSP2 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC33.01■■■□□ 2.87
Ncaph2Q8BSP2 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC32.95■■■□□ 2.87
Ncaph2Q8BSP2 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC32.93■■■□□ 2.86
Ncaph2Q8BSP2 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC32.91■■■□□ 2.86
Ncaph2Q8BSP2 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC32.89■■■□□ 2.86
Ncaph2Q8BSP2 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC32.88■■■□□ 2.85
Ncaph2Q8BSP2 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC32.85■■■□□ 2.85
Ncaph2Q8BSP2 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC32.83■■■□□ 2.85
Ncaph2Q8BSP2 Rab21-202ENSMUST00000218831 843 ntBASIC32.78■■■□□ 2.84
Ncaph2Q8BSP2 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC32.74■■■□□ 2.83
Ncaph2Q8BSP2 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC32.72■■■□□ 2.83
Ncaph2Q8BSP2 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC32.7■■■□□ 2.83
Retrieved 100 of 76,532 protein–RNA pairs in 13.8 ms