RNA–Protein interactions for RNA: YLR440C

SEC39, Transcript of Component of the Dsl1p tethering complex, yeast

Gene SEC39, Length 2,130 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SEC39	YLR440C	CCT8	P47079	568 aa	Known RBP	5.25	□□□□□ -1.57
SEC39	YLR440C	RNR4	P49723	345 aa	Known RBP	5.25	□□□□□ -1.57
SEC39	YLR440C	RPN14	P53196	417 aa		5.25	□□□□□ -1.57
SEC39	YLR440C	INA17	Q02888	182 aa		5.25	□□□□□ -1.57
SEC39	YLR440C	DML1	Q03652	475 aa		5.25	□□□□□ -1.57
SEC39	YLR440C	GSF2	Q04697	403 aa	Known RBP	5.25	□□□□□ -1.57
SEC39	YLR440C	RTN1	Q04947	295 aa	Known RBP	5.25	□□□□□ -1.57
SEC39	YLR440C	ESC2	Q06340	456 aa		5.25	□□□□□ -1.57
SEC39	YLR440C	ATG17	Q06410	417 aa		5.25	□□□□□ -1.57
SEC39	YLR440C	VPS36	Q06696	566 aa		5.25	□□□□□ -1.57
SEC39	YLR440C	VIK1	Q12045	647 aa		5.25	□□□□□ -1.57
SEC39	YLR440C	RRP6	Q12149	733 aa	Known RBP	5.25	□□□□□ -1.57
SEC39	YLR440C	ADH4	P10127	382 aa		5.24	□□□□□ -1.57
SEC39	YLR440C	MSS116	P15424	664 aa	Known RBP	5.24	□□□□□ -1.57
SEC39	YLR440C	SFL1	P20134	766 aa		5.24	□□□□□ -1.57
SEC39	YLR440C	ADE2	P21264	571 aa	Known RBP	5.24	□□□□□ -1.57
SEC39	YLR440C	YMR262W	P38430	313 aa		5.24	□□□□□ -1.57
SEC39	YLR440C	YHL012W	P38709	493 aa		5.24	□□□□□ -1.57
SEC39	YLR440C	SIP3	P38717	1229 aa		5.24	□□□□□ -1.57
SEC39	YLR440C	SEC31	P38968	1273 aa	Known RBP	5.24	□□□□□ -1.57
SEC39	YLR440C	YIL092W	P40497	633 aa		5.24	□□□□□ -1.57
SEC39	YLR440C	SYG1	P40528	902 aa		5.24	□□□□□ -1.57
SEC39	YLR440C	YJR120W	P47157	116 aa		5.24	□□□□□ -1.57
SEC39	YLR440C	YGL242C	P53066	181 aa		5.24	□□□□□ -1.57
SEC39	YLR440C	TGL2	P54857	326 aa		5.24	□□□□□ -1.57
SEC39	YLR440C	CUS1	Q02554	436 aa	Predicted RBP	5.24	□□□□□ -1.57
SEC39	YLR440C	RBA50	Q04418	439 aa		5.24	□□□□□ -1.57
SEC39	YLR440C	DIB1	Q06819	143 aa	Predicted RBP	5.24	□□□□□ -1.57
SEC39	YLR440C	FRT1	Q99332	602 aa		5.24	□□□□□ -1.57
SEC39	YLR440C	TUS1	Q06412	1307 aa		5.24	□□□□□ -1.57
SEC39	YLR440C	YIL177C	P40434	1758 aa		5.24	□□□□□ -1.57
SEC39	YLR440C	YJL225C	P40889	1758 aa		5.24	□□□□□ -1.57
SEC39	YLR440C	BIK1	P11709	440 aa		5.24	□□□□□ -1.57
SEC39	YLR440C	ENA1	P13587	1091 aa		5.24	□□□□□ -1.57
SEC39	YLR440C	NCP1	P16603	691 aa	Known RBP	5.24	□□□□□ -1.57
SEC39	YLR440C	RPL8A	P17076	256 aa	Known RBP	5.24	□□□□□ -1.57
SEC39	YLR440C	SPS22	P25380	463 aa		5.24	□□□□□ -1.57
SEC39	YLR440C	MSH1	P25846	959 aa		5.24	□□□□□ -1.57
SEC39	YLR440C	RPL8B	P29453	256 aa	Known RBP	5.24	□□□□□ -1.57
SEC39	YLR440C	HMX1	P32339	317 aa		5.24	□□□□□ -1.57
SEC39	YLR440C	SEC66	P33754	206 aa		5.24	□□□□□ -1.57
SEC39	YLR440C	ISM1	P48526	1002 aa		5.24	□□□□□ -1.57
SEC39	YLR440C	PIP2	P52960	996 aa		5.24	□□□□□ -1.57
SEC39	YLR440C	ENA2	Q01896	1091 aa		5.24	□□□□□ -1.57
SEC39	YLR440C	YPL109C	Q02981	657 aa		5.24	□□□□□ -1.57
SEC39	YLR440C	UTP5	Q04177	643 aa	Known RBP	5.24	□□□□□ -1.57
SEC39	YLR440C	DPB4	Q04603	196 aa	Known RBP	5.24	□□□□□ -1.57
SEC39	YLR440C	SML1	Q04964	104 aa		5.24	□□□□□ -1.57
SEC39	YLR440C	YDL144C	Q07589	356 aa		5.24	□□□□□ -1.57
SEC39	YLR440C	PPM2	Q08282	695 aa		5.24	□□□□□ -1.57
SEC39	YLR440C	DSE3	Q08729	430 aa		5.24	□□□□□ -1.57
SEC39	YLR440C	ENA5	Q12691	1091 aa		5.24	□□□□□ -1.57
SEC39	YLR440C	SRN2	Q99176	213 aa		5.24	□□□□□ -1.57
SEC39	YLR440C	PDR18	P53756	1333 aa		5.24	□□□□□ -1.57
SEC39	YLR440C	FBP1	P09201	348 aa		5.23	□□□□□ -1.57
SEC39	YLR440C	FUR1	P18562	216 aa	Known RBP	5.23	□□□□□ -1.57
SEC39	YLR440C	ORC2	P32833	620 aa		5.23	□□□□□ -1.57
SEC39	YLR440C	SEG2	P34250	1132 aa		5.23	□□□□□ -1.57
SEC39	YLR440C	SDS22	P36047	338 aa		5.23	□□□□□ -1.57
SEC39	YLR440C	YTA12	P40341	825 aa		5.23	□□□□□ -1.57
SEC39	YLR440C	YIL161W	P40449	235 aa	Known RBP	5.23	□□□□□ -1.57
SEC39	YLR440C	PCI8	P40512	444 aa		5.23	□□□□□ -1.57
SEC39	YLR440C	SKP2	P42843	763 aa		5.23	□□□□□ -1.57
SEC39	YLR440C	BBC1	P47068	1157 aa		5.23	□□□□□ -1.57
SEC39	YLR440C	STB4	P50104	949 aa		5.23	□□□□□ -1.57
SEC39	YLR440C	KAP114	P53067	1004 aa		5.23	□□□□□ -1.57
SEC39	YLR440C	MON1	P53129	644 aa		5.23	□□□□□ -1.57
SEC39	YLR440C	COG2	P53271	262 aa		5.23	□□□□□ -1.57
SEC39	YLR440C	HOS3	Q02959	697 aa	Known RBP	5.23	□□□□□ -1.57
SEC39	YLR440C	FRK1	Q03002	865 aa	Predicted RBP	5.23	□□□□□ -1.57
SEC39	YLR440C	PML39	Q03760	334 aa		5.23	□□□□□ -1.57
SEC39	YLR440C	SPC24	Q04477	213 aa		5.23	□□□□□ -1.57
SEC39	YLR440C	ARP10	Q04549	284 aa		5.23	□□□□□ -1.57
SEC39	YLR440C	YLR287C	Q05881	355 aa		5.23	□□□□□ -1.57
SEC39	YLR440C	DCS1	Q06151	350 aa		5.23	□□□□□ -1.57
SEC39	YLR440C	TLG2	Q08144	397 aa		5.23	□□□□□ -1.57
SEC39	YLR440C	VHS3	Q08438	674 aa		5.23	□□□□□ -1.57
SEC39	YLR440C	SSP2	Q08646	371 aa		5.23	□□□□□ -1.57
SEC39	YLR440C	YLR125W	Q12138	136 aa		5.23	□□□□□ -1.57
SEC39	YLR440C	YOR019W	Q99248	730 aa		5.23	□□□□□ -1.57
SEC39	YLR440C	MSB1	P21339	1137 aa	Known RBP	5.23	□□□□□ -1.57
SEC39	YLR440C	YJU2	P28320	278 aa	Predicted RBP	5.23	□□□□□ -1.57
SEC39	YLR440C	GUT2	P32191	649 aa		5.23	□□□□□ -1.57
SEC39	YLR440C	PTC3	P34221	468 aa	Known RBP	5.23	□□□□□ -1.57
SEC39	YLR440C	BDF1	P35817	686 aa		5.23	□□□□□ -1.57
SEC39	YLR440C	KAP104	P38217	918 aa	Known RBP	5.23	□□□□□ -1.57
SEC39	YLR440C	COS111	P38308	924 aa		5.23	□□□□□ -1.57
SEC39	YLR440C	VMA22	P38784	181 aa		5.23	□□□□□ -1.57
SEC39	YLR440C	RVS167	P39743	482 aa	Known RBP	5.23	□□□□□ -1.57
SEC39	YLR440C	ARF3	P40994	183 aa	RIP-Chip data	5.23	□□□□□ -1.57	not detected
SEC39	YLR440C	TAF4	P50105	388 aa		5.23	□□□□□ -1.57
SEC39	YLR440C	YGR054W	P53235	642 aa	Known RBP	5.23	□□□□□ -1.57
SEC39	YLR440C	SSL2	Q00578	843 aa		5.23	□□□□□ -1.57
SEC39	YLR440C	MET14	Q02196	202 aa		5.23	□□□□□ -1.57
SEC39	YLR440C	MEC3	Q02574	474 aa		5.23	□□□□□ -1.57
SEC39	YLR440C	SPR28	Q04921	423 aa		5.23	□□□□□ -1.57
SEC39	YLR440C	SPO21	Q12411	609 aa		5.23	□□□□□ -1.57
SEC39	YLR440C	CMC2	Q3E7A4	109 aa		5.23	□□□□□ -1.57
SEC39	YLR440C	ADR1	P07248	1323 aa		5.23	□□□□□ -1.57
SEC39	YLR440C	PAB1	P04147	577 aa	Known RBP RIP-Chip data	5.22	□□□□□ -1.57	not detected

Retrieved 100 of 5,963 RNA–protein pairs in 12.7 ms