RNA–Protein interactions for RNA: YLR227W-B

YLR227W-B, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YLR227W-B, Length 5,268 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YLR227W-BYLR227W-B NUP85P46673 744 aa3.73□□□□□ -1.81
YLR227W-BYLR227W-B YJR054WP47114 497 aa3.73□□□□□ -1.81
YLR227W-BYLR227W-B VPS70P47161 811 aa3.73□□□□□ -1.81
YLR227W-BYLR227W-B CPR6P53691 371 aaKnown RBP3.73□□□□□ -1.81
YLR227W-BYLR227W-B CSR1Q06705 408 aaKnown RBP3.73□□□□□ -1.81
YLR227W-BYLR227W-B NDJ1Q12366 352 aa3.73□□□□□ -1.81
YLR227W-BYLR227W-B MKK1P32490 508 aa3.73□□□□□ -1.81
YLR227W-BYLR227W-B MCM7P38132 845 aa3.73□□□□□ -1.81
YLR227W-BYLR227W-B PRP24P49960 444 aaKnown RBP3.73□□□□□ -1.81
YLR227W-BYLR227W-B UTP5Q04177 643 aaKnown RBP3.73□□□□□ -1.81
YLR227W-BYLR227W-B SPP382Q06411 708 aaPredicted RBP3.73□□□□□ -1.81
YLR227W-BYLR227W-B RRP5Q05022 1729 aaKnown RBP3.73□□□□□ -1.81
YLR227W-BYLR227W-B CDC11P32458 415 aa3.73□□□□□ -1.81
YLR227W-BYLR227W-B CDC53Q12018 815 aaKnown RBP3.73□□□□□ -1.81
YLR227W-BYLR227W-B MCD1Q12158 566 aa3.73□□□□□ -1.81
YLR227W-BYLR227W-B YDR215CQ12240 137 aa3.73□□□□□ -1.81
YLR227W-BYLR227W-B PNO1Q99216 274 aaKnown RBP3.73□□□□□ -1.81
YLR227W-BYLR227W-B APE4P38821 490 aa3.73□□□□□ -1.81
YLR227W-BYLR227W-B PAN2P53010 1115 aaPredicted RBP3.73□□□□□ -1.81
YLR227W-BYLR227W-B ARP1P38696 384 aa3.72□□□□□ -1.81
YLR227W-BYLR227W-B PRP38Q00723 242 aaPredicted RBP3.72□□□□□ -1.81
YLR227W-BYLR227W-B MIS1P09440 975 aaKnown RBP3.72□□□□□ -1.81
YLR227W-BYLR227W-B RPL43AP0CX25 92 aaKnown RBP3.72□□□□□ -1.81
YLR227W-BYLR227W-B RPL43BP0CX26 92 aa3.72□□□□□ -1.81
YLR227W-BYLR227W-B TCP1P12612 559 aaKnown RBP3.72□□□□□ -1.81
YLR227W-BYLR227W-B VMA4P22203 233 aaKnown RBP3.72□□□□□ -1.81
YLR227W-BYLR227W-B TPP1Q03796 238 aa3.72□□□□□ -1.81
YLR227W-BYLR227W-B SPO20Q04359 397 aa3.72□□□□□ -1.81
YLR227W-BYLR227W-B GRX8Q05926 109 aa3.72□□□□□ -1.81
YLR227W-BYLR227W-B TUB3P09734 445 aaKnown RBP3.72□□□□□ -1.81
YLR227W-BYLR227W-B SST2P11972 698 aaKnown RBP3.72□□□□□ -1.81
YLR227W-BYLR227W-B TUP1P16649 713 aa3.72□□□□□ -1.81
YLR227W-BYLR227W-B YHL041WP38730 149 aa3.72□□□□□ -1.81
YLR227W-BYLR227W-B YGL108CP53139 140 aa3.72□□□□□ -1.81
YLR227W-BYLR227W-B JIP3O13555 125 aa3.72□□□□□ -1.81
YLR227W-BYLR227W-B RPS14AP06367 137 aaKnown RBP3.72□□□□□ -1.81
YLR227W-BYLR227W-B COQ1P18900 473 aa3.72□□□□□ -1.81
YLR227W-BYLR227W-B MMS4P38257 691 aa3.72□□□□□ -1.81
YLR227W-BYLR227W-B RPS14BP39516 138 aaKnown RBP3.72□□□□□ -1.81
YLR227W-BYLR227W-B RAD17P48581 401 aa3.72□□□□□ -1.81
YLR227W-BYLR227W-B SAP4P53036 818 aa3.72□□□□□ -1.81
YLR227W-BYLR227W-B MSH6Q03834 1242 aa3.72□□□□□ -1.81
YLR227W-BYLR227W-B SHS1Q07657 551 aa3.72□□□□□ -1.81
YLR227W-BYLR227W-B MDM12Q92328 271 aa3.72□□□□□ -1.81
YLR227W-BYLR227W-B RPL35AP0CX84 120 aaKnown RBP3.72□□□□□ -1.81
YLR227W-BYLR227W-B RPL35BP0CX85 120 aaKnown RBP3.72□□□□□ -1.81
YLR227W-BYLR227W-B IRC6P43615 237 aa3.72□□□□□ -1.81
YLR227W-BYLR227W-B CUS1Q02554 436 aaPredicted RBP3.72□□□□□ -1.81
YLR227W-BYLR227W-B YPR204WQ08995 1032 aa3.72□□□□□ -1.81
YLR227W-BYLR227W-B SAC3P46674 1301 aa3.71□□□□□ -1.81
YLR227W-BYLR227W-B KEX2P13134 814 aa3.71□□□□□ -1.82
YLR227W-BYLR227W-B GDA1P32621 518 aa3.71□□□□□ -1.82
YLR227W-BYLR227W-B CTF18P49956 741 aa3.71□□□□□ -1.82
YLR227W-BYLR227W-B YAT1P80235 687 aa3.71□□□□□ -1.82
YLR227W-BYLR227W-B NUP53Q03790 475 aa3.71□□□□□ -1.82
YLR227W-BYLR227W-B TIP41Q12199 356 aa3.71□□□□□ -1.82
YLR227W-BYLR227W-B YDR262WQ12331 272 aa3.71□□□□□ -1.82
YLR227W-BYLR227W-B EFG1Q3E705 233 aaKnown RBP3.71□□□□□ -1.82
YLR227W-BYLR227W-B TEF1P02994 458 aaKnown RBP3.71□□□□□ -1.82
YLR227W-BYLR227W-B NTH1P32356 751 aa3.71□□□□□ -1.82
YLR227W-BYLR227W-B RPT5P33297 434 aaKnown RBP3.71□□□□□ -1.82
YLR227W-BYLR227W-B GND1P38720 489 aaKnown RBP3.71□□□□□ -1.82
YLR227W-BYLR227W-B YEL023CP39992 682 aa3.71□□□□□ -1.82
YLR227W-BYLR227W-B YIR042CP40586 236 aa3.71□□□□□ -1.82
YLR227W-BYLR227W-B OPT1P40897 799 aa3.71□□□□□ -1.82
YLR227W-BYLR227W-B TFG1P41895 735 aaPredicted RBP3.71□□□□□ -1.82
YLR227W-BYLR227W-B TAH18Q12181 623 aa3.71□□□□□ -1.82
YLR227W-BYLR227W-B YKL033W-AQ86ZR7 236 aa3.71□□□□□ -1.82
YLR227W-BYLR227W-B CIT2P08679 460 aa3.71□□□□□ -1.82
YLR227W-BYLR227W-B ADE2P21264 571 aaKnown RBP3.71□□□□□ -1.82
YLR227W-BYLR227W-B KTR1P27810 393 aaKnown RBP3.71□□□□□ -1.82
YLR227W-BYLR227W-B ERV46P39727 415 aa3.71□□□□□ -1.82
YLR227W-BYLR227W-B CCT8P47079 568 aaKnown RBP3.71□□□□□ -1.82
YLR227W-BYLR227W-B ENT2Q05785 613 aa3.71□□□□□ -1.82
YLR227W-BYLR227W-B YDR061WQ12298 539 aa3.71□□□□□ -1.82
YLR227W-BYLR227W-B FLO1P32768 1537 aa3.71□□□□□ -1.82
YLR227W-BYLR227W-B PEX1P24004 1043 aa3.71□□□□□ -1.82
YLR227W-BYLR227W-B BCS1P32839 456 aa3.71□□□□□ -1.82
YLR227W-BYLR227W-B YTA12P40341 825 aa3.71□□□□□ -1.82
YLR227W-BYLR227W-B DLD2P46681 530 aaKnown RBP3.71□□□□□ -1.82
YLR227W-BYLR227W-B NCS2P53923 493 aaPredicted RBP3.71□□□□□ -1.82
YLR227W-BYLR227W-B HPF1Q05164 967 aa3.71□□□□□ -1.82
YLR227W-BYLR227W-B YLL032CQ07834 825 aaKnown RBP RIP-Chip data3.71□□□□□ -1.82not detected
YLR227W-BYLR227W-B YPT1P01123 206 aaKnown RBP3.7□□□□□ -1.82
YLR227W-BYLR227W-B GCD2P12754 651 aaPredicted RBP3.7□□□□□ -1.82
YLR227W-BYLR227W-B MET1P36150 593 aa3.7□□□□□ -1.82
YLR227W-BYLR227W-B SAE2P46946 345 aa3.7□□□□□ -1.82
YLR227W-BYLR227W-B FMS1P50264 508 aa3.7□□□□□ -1.82
YLR227W-BYLR227W-B FLC3P53121 802 aa3.7□□□□□ -1.82
YLR227W-BYLR227W-B YGL138CP53122 345 aa3.7□□□□□ -1.82
YLR227W-BYLR227W-B SSL2Q00578 843 aa3.7□□□□□ -1.82
YLR227W-BYLR227W-B PHM6Q05637 104 aa3.7□□□□□ -1.82
YLR227W-BYLR227W-B HFM1P51979 1187 aa3.7□□□□□ -1.82
YLR227W-BYLR227W-B TFB3Q03290 321 aa3.7□□□□□ -1.82
YLR227W-BYLR227W-B SGT1Q08446 395 aa3.7□□□□□ -1.82
YLR227W-BYLR227W-B YOR223WQ12015 292 aa3.7□□□□□ -1.82
YLR227W-BYLR227W-B SEC7P11075 2009 aaKnown RBP3.7□□□□□ -1.82
YLR227W-BYLR227W-B SNT1P25357 1226 aa3.7□□□□□ -1.82
YLR227W-BYLR227W-B RME1P32338 300 aaKnown RBP3.7□□□□□ -1.82
YLR227W-BYLR227W-B MRPL15P36523 253 aa3.7□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 20.5 ms