RNA–Protein interactions for RNA: YJR139C

HOM6, Transcript of Homoserine dehydrogenase (L-homoserine:NADP oxidoreductase), yeast

Gene HOM6, Length 1,080 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HOM6	YJR139C	YGL036W	P53185	909 aa	Predicted RBP	13.67	□□□□□ -0.22
HOM6	YJR139C	TSR1	Q07381	788 aa	Known RBP	13.67	□□□□□ -0.22
HOM6	YJR139C	PXL1	P36166	706 aa		13.66	□□□□□ -0.22
HOM6	YJR139C	NOP4	P37838	685 aa	Known RBP	13.66	□□□□□ -0.22
HOM6	YJR139C	SAF1	P38352	637 aa		13.66	□□□□□ -0.22
HOM6	YJR139C	MOB1	P40484	314 aa		13.66	□□□□□ -0.22
HOM6	YJR139C	MMM1	P41800	426 aa		13.66	□□□□□ -0.22
HOM6	YJR139C	IES1	P43579	692 aa		13.66	□□□□□ -0.22
HOM6	YJR139C	YJL045W	P47052	634 aa		13.66	□□□□□ -0.22
HOM6	YJR139C	LRE1	P25579	583 aa	Known RBP	13.65	□□□□□ -0.22
HOM6	YJR139C	SLG1	P54867	378 aa		13.65	□□□□□ -0.22
HOM6	YJR139C	GPD1	Q00055	391 aa	Known RBP	13.65	□□□□□ -0.22
HOM6	YJR139C	YOL098C	Q12496	1037 aa		13.65	□□□□□ -0.22
HOM6	YJR139C	PPR1	P07272	904 aa	Predicted RBP	13.64	□□□□□ -0.23
HOM6	YJR139C	APE1	P14904	514 aa		13.64	□□□□□ -0.23
HOM6	YJR139C	JNM1	P36224	373 aa		13.64	□□□□□ -0.23
HOM6	YJR139C	STR2	P47164	639 aa		13.64	□□□□□ -0.23
HOM6	YJR139C	MND1	P53102	219 aa		13.64	□□□□□ -0.23
HOM6	YJR139C	SGO1	Q08490	590 aa		13.64	□□□□□ -0.23
HOM6	YJR139C	TRE1	Q08919	783 aa		13.64	□□□□□ -0.23
HOM6	YJR139C	ATG9	Q12142	997 aa		13.64	□□□□□ -0.23
HOM6	YJR139C	YER152C	P10356	443 aa		13.63	□□□□□ -0.23
HOM6	YJR139C	SPO12	P17123	173 aa		13.63	□□□□□ -0.23
HOM6	YJR139C	EXO5	P38289	585 aa		13.63	□□□□□ -0.23
HOM6	YJR139C	CBR1	P38626	284 aa	Known RBP	13.63	□□□□□ -0.23
HOM6	YJR139C	BFA1	P47113	574 aa		13.63	□□□□□ -0.23
HOM6	YJR139C	VPS25	P47142	202 aa		13.63	□□□□□ -0.23
HOM6	YJR139C	HER2	Q03557	464 aa		13.63	□□□□□ -0.23
HOM6	YJR139C	HMI1	Q12039	706 aa		13.63	□□□□□ -0.23
HOM6	YJR139C	TRP2	P00899	507 aa	Known RBP	13.62	□□□□□ -0.23
HOM6	YJR139C	HMG2	P12684	1045 aa		13.62	□□□□□ -0.23
HOM6	YJR139C	PDC6	P26263	563 aa	Known RBP	13.62	□□□□□ -0.23
HOM6	YJR139C	MPE1	P35728	441 aa	Known RBP	13.62	□□□□□ -0.23
HOM6	YJR139C	RIM4	P38741	713 aa		13.62	□□□□□ -0.23
HOM6	YJR139C	SMC2	P38989	1170 aa	Known RBP	13.62	□□□□□ -0.23
HOM6	YJR139C	PHO86	P46956	311 aa		13.62	□□□□□ -0.23
HOM6	YJR139C	ASG7	P46993	209 aa		13.62	□□□□□ -0.23
HOM6	YJR139C	SAM3	Q08986	587 aa		13.62	□□□□□ -0.23
HOM6	YJR139C	RPS3	P05750	240 aa	Known RBP	13.61	□□□□□ -0.23
HOM6	YJR139C	MET4	P32389	672 aa		13.61	□□□□□ -0.23
HOM6	YJR139C	GYP6	P32806	458 aa		13.61	□□□□□ -0.23
HOM6	YJR139C	YMC2	P38087	329 aa		13.61	□□□□□ -0.23
HOM6	YJR139C	YEL075C	P39972	122 aa		13.61	□□□□□ -0.23
HOM6	YJR139C	RPT2	P40327	437 aa	Known RBP	13.61	□□□□□ -0.23
HOM6	YJR139C	SHQ1	P40486	507 aa	Predicted RBP	13.61	□□□□□ -0.23
HOM6	YJR139C	YAP5	P40574	245 aa		13.61	□□□□□ -0.23
HOM6	YJR139C	HXT8	P40886	569 aa		13.61	□□□□□ -0.23
HOM6	YJR139C	FMP25	Q08023	583 aa		13.61	□□□□□ -0.23
HOM6	YJR139C	RRD2	Q12461	358 aa		13.61	□□□□□ -0.23
HOM6	YJR139C	JIP3	O13555	125 aa		13.6	□□□□□ -0.23
HOM6	YJR139C	VMA4	P22203	233 aa	Known RBP	13.6	□□□□□ -0.23
HOM6	YJR139C	RAD55	P38953	406 aa		13.6	□□□□□ -0.23
HOM6	YJR139C	ARO80	Q04052	950 aa		13.6	□□□□□ -0.23
HOM6	YJR139C	DDC1	Q08949	612 aa		13.6	□□□□□ -0.23
HOM6	YJR139C	VPS54	Q12071	889 aa		13.6	□□□□□ -0.23
HOM6	YJR139C	PEX34	P25584	144 aa		13.59	□□□□□ -0.23
HOM6	YJR139C	CDC27	P38042	758 aa		13.59	□□□□□ -0.23
HOM6	YJR139C	PFD1	P46988	109 aa		13.59	□□□□□ -0.23
HOM6	YJR139C	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	13.59	□□□□□ -0.23	not detected
HOM6	YJR139C	APL4	Q12028	832 aa		13.59	□□□□□ -0.23
HOM6	YJR139C	NBP2	Q12163	236 aa		13.59	□□□□□ -0.23
HOM6	YJR139C	RRN6	P32786	894 aa		13.58	□□□□□ -0.24
HOM6	YJR139C	YBL036C	P38197	257 aa		13.58	□□□□□ -0.24
HOM6	YJR139C	YTA12	P40341	825 aa		13.58	□□□□□ -0.24
HOM6	YJR139C	ATG3	P40344	310 aa		13.58	□□□□□ -0.24
HOM6	YJR139C	GUF1	P46943	645 aa		13.58	□□□□□ -0.24
HOM6	YJR139C	RCL1	Q08096	367 aa	Predicted RBP	13.58	□□□□□ -0.24
HOM6	YJR139C	MDM38	Q08179	573 aa		13.58	□□□□□ -0.24
HOM6	YJR139C	KEX2	P13134	814 aa		13.57	□□□□□ -0.24
HOM6	YJR139C	PPZ1	P26570	692 aa		13.57	□□□□□ -0.24
HOM6	YJR139C	MCM2	P29469	868 aa		13.57	□□□□□ -0.24
HOM6	YJR139C	YKR051W	P36142	418 aa		13.57	□□□□□ -0.24
HOM6	YJR139C	QNS1	P38795	714 aa	Known RBP	13.57	□□□□□ -0.24
HOM6	YJR139C	SFB3	P38810	929 aa		13.57	□□□□□ -0.24
HOM6	YJR139C	UTP8	P53276	713 aa	Known RBP	13.57	□□□□□ -0.24
HOM6	YJR139C	GCN5	Q03330	439 aa		13.57	□□□□□ -0.24
HOM6	YJR139C	CCH1	P50077	2039 aa		13.56	□□□□□ -0.24
HOM6	YJR139C	CLC1	P17891	233 aa		13.56	□□□□□ -0.24
HOM6	YJR139C	RAD16	P31244	790 aa		13.56	□□□□□ -0.24
HOM6	YJR139C	MRP4	P32902	394 aa		13.56	□□□□□ -0.24
HOM6	YJR139C	TSA1	P34760	196 aa	Known RBP	13.56	□□□□□ -0.24
HOM6	YJR139C	YKL050C	P35736	922 aa		13.56	□□□□□ -0.24
HOM6	YJR139C	ABZ1	P37254	787 aa	Predicted RBP	13.56	□□□□□ -0.24
HOM6	YJR139C	CDC1	P40986	491 aa		13.56	□□□□□ -0.24
HOM6	YJR139C	PUS2	P53167	370 aa		13.56	□□□□□ -0.24
HOM6	YJR139C	HOP2	P53187	214 aa		13.56	□□□□□ -0.24
HOM6	YJR139C	ERG5	P54781	538 aa		13.56	□□□□□ -0.24
HOM6	YJR139C	CEG1	Q01159	459 aa	Predicted RBP	13.56	□□□□□ -0.24
HOM6	YJR139C	MTD1	Q02046	320 aa	Known RBP	13.56	□□□□□ -0.24
HOM6	YJR139C	NSE5	Q03718	556 aa		13.56	□□□□□ -0.24
HOM6	YJR139C	OPY2	Q06810	360 aa		13.56	□□□□□ -0.24
HOM6	YJR139C	DIS3	Q08162	1001 aa	Known RBP	13.56	□□□□□ -0.24
HOM6	YJR139C	NEW1	Q08972	1196 aa	Known RBP	13.56	□□□□□ -0.24
HOM6	YJR139C	SPE3	Q12074	293 aa	Known RBP	13.56	□□□□□ -0.24
HOM6	YJR139C	RAD59	Q12223	238 aa		13.56	□□□□□ -0.24
HOM6	YJR139C	BET2	P20133	325 aa		13.55	□□□□□ -0.24
HOM6	YJR139C	RRP43	P25359	394 aa	Predicted RBP	13.55	□□□□□ -0.24
HOM6	YJR139C	SPT5	P27692	1063 aa	Known RBP	13.55	□□□□□ -0.24
HOM6	YJR139C	FHL1	P39521	936 aa		13.55	□□□□□ -0.24
HOM6	YJR139C	AVT2	P39981	480 aa		13.55	□□□□□ -0.24

Retrieved 100 of 5,963 RNA–protein pairs in 33.7 ms