RNA–Protein interactions for RNA: YHL030W

ECM29, Transcript of Scaffold protein, yeast

Gene ECM29, Length 5,607 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ECM29	YHL030W	EMP46	Q12396	444 aa		2.85	□□□□□ -1.95
ECM29	YHL030W	THP2	O13539	261 aa	Known RBP	2.85	□□□□□ -1.95
ECM29	YHL030W	ENO2	P00925	437 aa	Known RBP	2.85	□□□□□ -1.95
ECM29	YHL030W	SAM2	P19358	384 aa	Known RBP	2.85	□□□□□ -1.95
ECM29	YHL030W	PDB1	P32473	366 aa	Known RBP	2.85	□□□□□ -1.95
ECM29	YHL030W	ASK1	P35734	292 aa		2.85	□□□□□ -1.95
ECM29	YHL030W	SPC34	P36131	295 aa		2.85	□□□□□ -1.95
ECM29	YHL030W	EAF5	P39995	279 aa		2.85	□□□□□ -1.95
ECM29	YHL030W	EPS1	P40557	701 aa		2.85	□□□□□ -1.95
ECM29	YHL030W	LYS14	P40971	790 aa		2.85	□□□□□ -1.95
ECM29	YHL030W	FMP33	P46998	180 aa		2.85	□□□□□ -1.95
ECM29	YHL030W	ATP22	P50273	684 aa	Predicted RBP	2.85	□□□□□ -1.95
ECM29	YHL030W	APP1	P53933	587 aa		2.85	□□□□□ -1.95
ECM29	YHL030W	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	2.85	□□□□□ -1.95	not detected
ECM29	YHL030W	SHS1	Q07657	551 aa		2.85	□□□□□ -1.95
ECM29	YHL030W	PPM2	Q08282	695 aa		2.85	□□□□□ -1.95
ECM29	YHL030W	YPT6	Q99260	215 aa		2.85	□□□□□ -1.95
ECM29	YHL030W	GAL2	P13181	574 aa		2.84	□□□□□ -1.95
ECM29	YHL030W	MCM3	P24279	971 aa	Known RBP	2.84	□□□□□ -1.95
ECM29	YHL030W	RVS161	P25343	265 aa	Known RBP	2.84	□□□□□ -1.95
ECM29	YHL030W	VAC17	P25591	423 aa		2.84	□□□□□ -1.95
ECM29	YHL030W	COX13	P32799	129 aa		2.84	□□□□□ -1.95
ECM29	YHL030W	YKU70	P32807	602 aa		2.84	□□□□□ -1.95
ECM29	YHL030W	NCL1	P38205	684 aa	Known RBP	2.84	□□□□□ -1.95
ECM29	YHL030W	YBR138C	P38277	524 aa		2.84	□□□□□ -1.95
ECM29	YHL030W	SMF2	P38778	549 aa		2.84	□□□□□ -1.95
ECM29	YHL030W	ICP55	P40051	511 aa		2.84	□□□□□ -1.95
ECM29	YHL030W	LIA1	P47120	325 aa	Known RBP	2.84	□□□□□ -1.95
ECM29	YHL030W	NUT1	P53114	1132 aa		2.84	□□□□□ -1.95
ECM29	YHL030W	ASI3	P53983	676 aa		2.84	□□□□□ -1.95
ECM29	YHL030W	IRC4	Q03036	179 aa		2.84	□□□□□ -1.95
ECM29	YHL030W	YMR111C	Q04461	462 aa	Predicted RBP	2.84	□□□□□ -1.95
ECM29	YHL030W	RSC3	Q06639	885 aa		2.84	□□□□□ -1.95
ECM29	YHL030W	GPI13	Q07830	1017 aa		2.84	□□□□□ -1.95
ECM29	YHL030W	GPN2	Q08726	347 aa	Predicted RBP	2.84	□□□□□ -1.95
ECM29	YHL030W	YPR204W	Q08995	1032 aa		2.84	□□□□□ -1.95
ECM29	YHL030W	NHA1	Q99271	985 aa		2.84	□□□□□ -1.95
ECM29	YHL030W	ADP1	P25371	1049 aa		2.84	□□□□□ -1.95
ECM29	YHL030W	RPN2	P32565	945 aa	Known RBP	2.84	□□□□□ -1.95
ECM29	YHL030W	RPT5	P33297	434 aa	Known RBP	2.84	□□□□□ -1.95
ECM29	YHL030W	YKR015C	P36111	568 aa		2.84	□□□□□ -1.95
ECM29	YHL030W	PTC4	P38089	393 aa		2.84	□□□□□ -1.95
ECM29	YHL030W	MSG5	P38590	489 aa		2.84	□□□□□ -1.95
ECM29	YHL030W	SCC4	P40090	624 aa		2.84	□□□□□ -1.95
ECM29	YHL030W	KHA1	P40309	873 aa		2.84	□□□□□ -1.95
ECM29	YHL030W	ARO80	Q04052	950 aa		2.84	□□□□□ -1.95
ECM29	YHL030W	POB3	Q04636	552 aa	Known RBP	2.84	□□□□□ -1.95
ECM29	YHL030W	DSE3	Q08729	430 aa		2.84	□□□□□ -1.95
ECM29	YHL030W	ADR1	P07248	1323 aa		2.84	□□□□□ -1.95
ECM29	YHL030W	MSS116	P15424	664 aa	Known RBP	2.84	□□□□□ -1.95
ECM29	YHL030W	MIP1	P15801	1254 aa		2.84	□□□□□ -1.95
ECM29	YHL030W	DAL7	P21826	554 aa		2.84	□□□□□ -1.95
ECM29	YHL030W	KIN3	P22209	435 aa		2.84	□□□□□ -1.95
ECM29	YHL030W	HES1	P35843	434 aa		2.84	□□□□□ -1.95
ECM29	YHL030W	PXL1	P36166	706 aa		2.84	□□□□□ -1.95
ECM29	YHL030W	CIT3	P43635	486 aa		2.84	□□□□□ -1.95
ECM29	YHL030W	TMA22	P47089	198 aa	Predicted RBP	2.84	□□□□□ -1.95
ECM29	YHL030W	RPS12	P48589	143 aa	Known RBP	2.84	□□□□□ -1.95
ECM29	YHL030W	RET3	P53600	189 aa		2.84	□□□□□ -1.95
ECM29	YHL030W	GRX3	Q03835	250 aa		2.84	□□□□□ -1.95
ECM29	YHL030W	CDC73	Q06697	393 aa		2.84	□□□□□ -1.95
ECM29	YHL030W	FMP25	Q08023	583 aa		2.84	□□□□□ -1.95
ECM29	YHL030W	ABP140	Q08641	628 aa	Known RBP	2.84	□□□□□ -1.95
ECM29	YHL030W	THS1	P04801	734 aa	Known RBP	2.84	□□□□□ -1.96
ECM29	YHL030W	SSC1	P0CS90	654 aa	Known RBP	2.84	□□□□□ -1.96
ECM29	YHL030W	RET1	P22276	1149 aa	Known RBP	2.84	□□□□□ -1.96
ECM29	YHL030W	PRE8	P23639	250 aa		2.84	□□□□□ -1.96
ECM29	YHL030W	RAD51	P25454	400 aa		2.84	□□□□□ -1.96
ECM29	YHL030W	URA7	P28274	579 aa	Known RBP	2.84	□□□□□ -1.96
ECM29	YHL030W	HSP78	P33416	811 aa		2.84	□□□□□ -1.96
ECM29	YHL030W	TIF3	P34167	436 aa	Known RBP	2.84	□□□□□ -1.96
ECM29	YHL030W	TFA2	P36145	328 aa		2.84	□□□□□ -1.96
ECM29	YHL030W	YBR062C	P38239	180 aa		2.84	□□□□□ -1.96
ECM29	YHL030W	SLX1	P38324	304 aa		2.84	□□□□□ -1.96
ECM29	YHL030W	SRP68	P38687	599 aa	Known RBP	2.84	□□□□□ -1.96
ECM29	YHL030W	CKB2	P38930	258 aa		2.84	□□□□□ -1.96
ECM29	YHL030W	LCP5	P40079	357 aa	Predicted RBP	2.84	□□□□□ -1.96
ECM29	YHL030W	UBP7	P40453	1071 aa		2.84	□□□□□ -1.96
ECM29	YHL030W	DAK2	P43550	591 aa		2.84	□□□□□ -1.96
ECM29	YHL030W	SOL4	P53315	255 aa		2.84	□□□□□ -1.96
ECM29	YHL030W	HST2	P53686	357 aa		2.84	□□□□□ -1.96
ECM29	YHL030W	GIM3	P53900	129 aa		2.84	□□□□□ -1.96
ECM29	YHL030W	GPD1	Q00055	391 aa	Known RBP	2.84	□□□□□ -1.96
ECM29	YHL030W	TMA64	Q04600	565 aa	Known RBP	2.84	□□□□□ -1.96
ECM29	YHL030W	PGC1	Q08959	321 aa		2.84	□□□□□ -1.96
ECM29	YHL030W	ACM1	Q08981	209 aa		2.84	□□□□□ -1.96
ECM29	YHL030W	NUC1	P08466	329 aa		2.84	□□□□□ -1.96
ECM29	YHL030W	KIN1	P13185	1064 aa		2.84	□□□□□ -1.96
ECM29	YHL030W	DPB2	P24482	689 aa	Predicted RBP	2.84	□□□□□ -1.96
ECM29	YHL030W	GCD11	P32481	527 aa	Known RBP	2.84	□□□□□ -1.96
ECM29	YHL030W	TFB1	P32776	642 aa		2.84	□□□□□ -1.96
ECM29	YHL030W	CUE2	P36075	443 aa	Known RBP	2.84	□□□□□ -1.96
ECM29	YHL030W	ALK1	P43633	760 aa	Known RBP	2.84	□□□□□ -1.96
ECM29	YHL030W	ARC1	P46672	376 aa	Known RBP	2.84	□□□□□ -1.96
ECM29	YHL030W	CGR1	P53188	120 aa		2.84	□□□□□ -1.96
ECM29	YHL030W	UTP22	P53254	1237 aa	Predicted RBP	2.84	□□□□□ -1.96
ECM29	YHL030W	GPI1	P53306	609 aa		2.84	□□□□□ -1.96
ECM29	YHL030W	MRPL50	P53724	139 aa		2.84	□□□□□ -1.96
ECM29	YHL030W	ARC35	P53731	342 aa	Known RBP	2.84	□□□□□ -1.96
ECM29	YHL030W	TRM44	Q02648	567 aa	Known RBP	2.84	□□□□□ -1.96

Retrieved 100 of 5,963 RNA–protein pairs in 10.5 ms