RNA–Protein interactions for RNA: YER178W

PDA1, Transcript of E1 alpha subunit of the pyruvate dehydrogenase (PDH) complex, yeastyeast

Gene PDA1, Length 1,263 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDA1YER178W EFB1P32471 206 aaKnown RBP7.52□□□□□ -1.21
PDA1YER178W NIP100P33420 868 aa7.52□□□□□ -1.21
PDA1YER178W ABZ1P37254 787 aaPredicted RBP7.52□□□□□ -1.21
PDA1YER178W ATG3P40344 310 aa7.52□□□□□ -1.21
PDA1YER178W DRN1P53255 507 aaKnown RBP7.52□□□□□ -1.21
PDA1YER178W MZM1Q03429 123 aaPredicted RBP7.52□□□□□ -1.21
PDA1YER178W YDR278CQ05612 105 aa7.52□□□□□ -1.21
PDA1YER178W YLR257WQ06146 321 aaKnown RBP7.52□□□□□ -1.21
PDA1YER178W PIG1Q06216 648 aa7.52□□□□□ -1.21
PDA1YER178W SIL1Q08199 421 aa7.52□□□□□ -1.21
PDA1YER178W LEA1Q08963 238 aaPredicted RBP7.52□□□□□ -1.21
PDA1YER178W VPS54Q12071 889 aa7.52□□□□□ -1.21
PDA1YER178W ATG9Q12142 997 aa7.52□□□□□ -1.21
PDA1YER178W RRP6Q12149 733 aaKnown RBP7.52□□□□□ -1.21
PDA1YER178W SNF1P06782 633 aaKnown RBP7.51□□□□□ -1.21
PDA1YER178W MAS1P10507 462 aa7.51□□□□□ -1.21
PDA1YER178W KEX2P13134 814 aa7.51□□□□□ -1.21
PDA1YER178W PDC6P26263 563 aaKnown RBP7.51□□□□□ -1.21
PDA1YER178W GAC1P28006 793 aa7.51□□□□□ -1.21
PDA1YER178W MRP4P32902 394 aa7.51□□□□□ -1.21
PDA1YER178W SAP190P36123 1033 aa7.51□□□□□ -1.21
PDA1YER178W PRM6Q04705 352 aa7.51□□□□□ -1.21
PDA1YER178W TRE1Q08919 783 aa7.51□□□□□ -1.21
PDA1YER178W BI2P03873 423 aa7.5□□□□□ -1.21
PDA1YER178W BI4P03879 638 aa7.5□□□□□ -1.21
PDA1YER178W CDC33P07260 213 aaKnown RBP7.5□□□□□ -1.21
PDA1YER178W EST1P17214 699 aaPredicted RBP7.5□□□□□ -1.21
PDA1YER178W PDE1P22434 369 aa7.5□□□□□ -1.21
PDA1YER178W SYN8P31377 255 aa7.5□□□□□ -1.21
PDA1YER178W GYP6P32806 458 aa7.5□□□□□ -1.21
PDA1YER178W TKL2P33315 681 aa7.5□□□□□ -1.21
PDA1YER178W PCH2P38126 564 aa7.5□□□□□ -1.21
PDA1YER178W YBL036CP38197 257 aa7.5□□□□□ -1.21
PDA1YER178W CBR1P38626 284 aaKnown RBP7.5□□□□□ -1.21
PDA1YER178W RIM4P38741 713 aa7.5□□□□□ -1.21
PDA1YER178W SET5P38890 526 aaKnown RBP7.5□□□□□ -1.21
PDA1YER178W GEM1P39722 662 aa7.5□□□□□ -1.21
PDA1YER178W TGL3P40308 642 aa7.5□□□□□ -1.21
PDA1YER178W SHQ1P40486 507 aaPredicted RBP7.5□□□□□ -1.21
PDA1YER178W TFG2P41896 400 aaPredicted RBP7.5□□□□□ -1.21
PDA1YER178W YJR054WP47114 497 aa7.5□□□□□ -1.21
PDA1YER178W YPL062WQ02781 134 aa7.5□□□□□ -1.21
PDA1YER178W YDR222WQ04925 415 aa7.5□□□□□ -1.21
PDA1YER178W YLR287CQ05881 355 aa7.5□□□□□ -1.21
PDA1YER178W YPR078CQ06813 372 aa7.5□□□□□ -1.21
PDA1YER178W FMP25Q08023 583 aa7.5□□□□□ -1.21
PDA1YER178W DIS3Q08162 1001 aaKnown RBP7.5□□□□□ -1.21
PDA1YER178W GPM2Q12008 311 aa7.5□□□□□ -1.21
PDA1YER178W BI3Q9ZZW7 517 aa7.5□□□□□ -1.21
PDA1YER178W APE1P14904 514 aa7.49□□□□□ -1.21
PDA1YER178W ISF1P32488 338 aa7.49□□□□□ -1.21
PDA1YER178W VPH1P32563 840 aaKnown RBP7.49□□□□□ -1.21
PDA1YER178W FHL1P39521 936 aa7.49□□□□□ -1.21
PDA1YER178W RPT2P40327 437 aaKnown RBP7.49□□□□□ -1.21
PDA1YER178W OYE3P41816 400 aaPredicted RBP7.49□□□□□ -1.21
PDA1YER178W MND1P53102 219 aa7.49□□□□□ -1.21
PDA1YER178W ERG5P54781 538 aa7.49□□□□□ -1.21
PDA1YER178W GPD1Q00055 391 aaKnown RBP7.49□□□□□ -1.21
PDA1YER178W RCL1Q08096 367 aaPredicted RBP7.49□□□□□ -1.21
PDA1YER178W RRP43P25359 394 aaPredicted RBP7.48□□□□□ -1.21
PDA1YER178W JNM1P36224 373 aa7.48□□□□□ -1.21
PDA1YER178W PEX28P38848 579 aa7.48□□□□□ -1.21
PDA1YER178W PML39Q03760 334 aa7.48□□□□□ -1.21
PDA1YER178W GYL1Q04322 720 aa7.48□□□□□ -1.21
PDA1YER178W TSR1Q07381 788 aaKnown RBP7.48□□□□□ -1.21
PDA1YER178W DDC1Q08949 612 aa7.48□□□□□ -1.21
PDA1YER178W NEW1Q08972 1196 aaKnown RBP7.48□□□□□ -1.21
PDA1YER178W YPQ1Q12010 308 aa7.48□□□□□ -1.21
PDA1YER178W LCB4Q12246 624 aa7.48□□□□□ -1.21
PDA1YER178W RPS3P05750 240 aaKnown RBP7.47□□□□□ -1.21
PDA1YER178W CLC1P17891 233 aa7.47□□□□□ -1.21
PDA1YER178W RAD16P31244 790 aa7.47□□□□□ -1.21
PDA1YER178W RRN6P32786 894 aa7.47□□□□□ -1.21
PDA1YER178W YKL097CP34245 136 aa7.47□□□□□ -1.21
PDA1YER178W YKL050CP35736 922 aa7.47□□□□□ -1.21
PDA1YER178W MIC60P36112 540 aa7.47□□□□□ -1.21
PDA1YER178W YKR051WP36142 418 aa7.47□□□□□ -1.21
PDA1YER178W RDH54P38086 958 aa7.47□□□□□ -1.21
PDA1YER178W QNS1P38795 714 aaKnown RBP7.47□□□□□ -1.21
PDA1YER178W MMF1P40185 145 aaKnown RBP7.47□□□□□ -1.21
PDA1YER178W TAF1P46677 1066 aa7.47□□□□□ -1.21
PDA1YER178W YMR1P47147 688 aaKnown RBP RIP-Chip data7.47□□□□□ -1.21not detected
PDA1YER178W ARO80Q04052 950 aa7.47□□□□□ -1.21
PDA1YER178W ECM22Q05958 814 aaPredicted RBP7.47□□□□□ -1.21
PDA1YER178W BSP1Q06604 576 aa7.47□□□□□ -1.21
PDA1YER178W YLR001CQ07895 862 aa7.47□□□□□ -1.21
PDA1YER178W SDH5Q08230 162 aa7.47□□□□□ -1.21
PDA1YER178W MNL2Q12205 849 aa7.47□□□□□ -1.21
PDA1YER178W EMP46Q12396 444 aa7.47□□□□□ -1.21
PDA1YER178W YER152CP10356 443 aa7.46□□□□□ -1.22
PDA1YER178W ERG11P10614 530 aa7.46□□□□□ -1.22
PDA1YER178W KAR3P17119 729 aa7.46□□□□□ -1.22
PDA1YER178W RAD57P25301 460 aa7.46□□□□□ -1.22
PDA1YER178W LRE1P25579 583 aaKnown RBP7.46□□□□□ -1.22
PDA1YER178W PPZ1P26570 692 aa7.46□□□□□ -1.22
PDA1YER178W DSS4P32601 143 aa7.46□□□□□ -1.22
PDA1YER178W NOP4P37838 685 aaKnown RBP7.46□□□□□ -1.22
PDA1YER178W YMC2P38087 329 aa7.46□□□□□ -1.22
PDA1YER178W NCL1P38205 684 aaKnown RBP7.46□□□□□ -1.22
PDA1YER178W SFB3P38810 929 aa7.46□□□□□ -1.22
Retrieved 100 of 5,963 RNA–protein pairs in 8.7 ms