RNA–Protein interactions for RNA: YDL077C

VAM6, Transcript of Subunit of the HOPS endocytic tethering complex, yeastyeast

Gene VAM6, Length 3,150 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VAM6YDL077C PET112P33893 541 aa1.14□□□□□ -2.23
VAM6YDL077C STE13P33894 931 aa1.14□□□□□ -2.23
VAM6YDL077C YEL1P34225 687 aa1.14□□□□□ -2.23
VAM6YDL077C HCS1P34243 683 aa1.14□□□□□ -2.23
VAM6YDL077C AST1P35183 429 aa1.14□□□□□ -2.23
VAM6YDL077C TEF4P36008 412 aaKnown RBP1.14□□□□□ -2.23
VAM6YDL077C PGM2P37012 569 aaKnown RBP1.14□□□□□ -2.23
VAM6YDL077C SHM1P37292 490 aaPredicted RBP1.14□□□□□ -2.23
VAM6YDL077C MNN2P38069 597 aa1.14□□□□□ -2.23
VAM6YDL077C MRX3P38172 270 aa1.14□□□□□ -2.23
VAM6YDL077C NCL1P38205 684 aaKnown RBP1.14□□□□□ -2.23
VAM6YDL077C FMP23P38231 175 aa1.14□□□□□ -2.23
VAM6YDL077C RGD1P38339 666 aa1.14□□□□□ -2.23
VAM6YDL077C GOS1P38736 223 aa1.14□□□□□ -2.23
VAM6YDL077C HAL5P38970 855 aaKnown RBP1.14□□□□□ -2.23
VAM6YDL077C MET10P39692 1035 aa1.14□□□□□ -2.23
VAM6YDL077C JLP2P40206 208 aa1.14□□□□□ -2.23
VAM6YDL077C SEC9P40357 651 aa1.14□□□□□ -2.23
VAM6YDL077C YRB2P40517 327 aa1.14□□□□□ -2.23
VAM6YDL077C SPR3P41901 512 aa1.14□□□□□ -2.23
VAM6YDL077C SNZ3P43545 298 aa1.14□□□□□ -2.23
VAM6YDL077C YJL055WP47044 245 aa1.14□□□□□ -2.23
VAM6YDL077C YJL049WP47048 450 aa1.14□□□□□ -2.23
VAM6YDL077C NPA3P47122 385 aa1.14□□□□□ -2.23
VAM6YDL077C RBL2P48606 106 aaKnown RBP1.14□□□□□ -2.23
VAM6YDL077C ZDS1P50111 915 aaKnown RBP1.14□□□□□ -2.23
VAM6YDL077C YPT32P51996 222 aaKnown RBP1.14□□□□□ -2.23
VAM6YDL077C MIG2P53035 382 aa1.14□□□□□ -2.23
VAM6YDL077C SPC105P53148 917 aa1.14□□□□□ -2.23
VAM6YDL077C DCP2P53550 970 aaKnown RBP1.14□□□□□ -2.23
VAM6YDL077C SNZ2P53824 298 aa1.14□□□□□ -2.23
VAM6YDL077C YNL144CP53907 740 aa1.14□□□□□ -2.23
VAM6YDL077C SSL2Q00578 843 aa1.14□□□□□ -2.23
VAM6YDL077C SRP1Q02821 542 aaKnown RBP1.14□□□□□ -2.23
VAM6YDL077C SNZ1Q03148 297 aa1.14□□□□□ -2.23
VAM6YDL077C VMS1Q04311 632 aaKnown RBP1.14□□□□□ -2.23
VAM6YDL077C HFD1Q04458 532 aa1.14□□□□□ -2.23
VAM6YDL077C ENT2Q05785 613 aa1.14□□□□□ -2.23
VAM6YDL077C YLR287CQ05881 355 aa1.14□□□□□ -2.23
VAM6YDL077C VPS38Q05919 439 aa1.14□□□□□ -2.23
VAM6YDL077C SPO77Q06134 477 aa1.14□□□□□ -2.23
VAM6YDL077C YCS4Q06156 1176 aa1.14□□□□□ -2.23
VAM6YDL077C MEU1Q07938 337 aaKnown RBP RIP-Chip data1.14□□□□□ -2.23not detected
VAM6YDL077C DIS3Q08162 1001 aaKnown RBP1.14□□□□□ -2.23
VAM6YDL077C MED7Q08278 222 aa1.14□□□□□ -2.23
VAM6YDL077C MET7Q08645 548 aa1.14□□□□□ -2.23
VAM6YDL077C CIR2Q08822 631 aa1.14□□□□□ -2.23
VAM6YDL077C CTI6Q08923 506 aa1.14□□□□□ -2.23
VAM6YDL077C YPL277CQ08989 487 aa1.14□□□□□ -2.23
VAM6YDL077C ELG1Q12050 791 aa1.14□□□□□ -2.23
VAM6YDL077C APC11Q12157 165 aa1.14□□□□□ -2.23
VAM6YDL077C TIP41Q12199 356 aa1.14□□□□□ -2.23
VAM6YDL077C CEX1Q12453 761 aa1.14□□□□□ -2.23
VAM6YDL077C RKM4Q12504 494 aa1.14□□□□□ -2.23
VAM6YDL077C HTZ1Q12692 134 aaKnown RBP1.14□□□□□ -2.23
VAM6YDL077C SEY1Q99287 776 aa1.14□□□□□ -2.23
VAM6YDL077C TY1B-NL2Q99337 1749 aaKnown RBP1.14□□□□□ -2.23
VAM6YDL077C JIP3O13555 125 aa1.14□□□□□ -2.23
VAM6YDL077C CHO2P05374 869 aaKnown RBP1.14□□□□□ -2.23
VAM6YDL077C SPT3P06844 337 aa1.14□□□□□ -2.23
VAM6YDL077C VAS1P07806 1104 aaKnown RBP1.14□□□□□ -2.23
VAM6YDL077C FUM1P08417 488 aaKnown RBP1.14□□□□□ -2.23
VAM6YDL077C RAP1P11938 827 aa1.14□□□□□ -2.23
VAM6YDL077C SUP45P12385 437 aaKnown RBP1.14□□□□□ -2.23
VAM6YDL077C GCN3P14741 305 aa1.14□□□□□ -2.23
VAM6YDL077C SAC7P17121 654 aa1.14□□□□□ -2.23
VAM6YDL077C PEX1P24004 1043 aa1.14□□□□□ -2.23
VAM6YDL077C GSY2P27472 705 aa1.14□□□□□ -2.23
VAM6YDL077C KRE2P27809 442 aa1.14□□□□□ -2.23
VAM6YDL077C SBA1P28707 216 aaKnown RBP1.14□□□□□ -2.23
VAM6YDL077C EFT1P32324 842 aaKnown RBP1.14□□□□□ -2.23
VAM6YDL077C CBF2P32504 956 aa1.14□□□□□ -2.23
VAM6YDL077C SRB4P32569 687 aa1.14□□□□□ -2.23
VAM6YDL077C ECM32P32644 1121 aaKnown RBP1.14□□□□□ -2.23
VAM6YDL077C YME1P32795 747 aa1.14□□□□□ -2.23
VAM6YDL077C VAM7P32912 316 aa1.14□□□□□ -2.23
VAM6YDL077C ARC19P33204 171 aaKnown RBP1.14□□□□□ -2.23
VAM6YDL077C SLD2P34252 453 aa1.14□□□□□ -2.23
VAM6YDL077C MNR2P35724 969 aa1.14□□□□□ -2.23
VAM6YDL077C GEF1P37020 779 aa1.14□□□□□ -2.23
VAM6YDL077C NAT2P37293 288 aa1.14□□□□□ -2.23
VAM6YDL077C HEK2P38199 381 aaKnown RBP RIP-Chip data1.14□□□□□ -2.23not detected
VAM6YDL077C RFC5P38251 354 aa1.14□□□□□ -2.23
VAM6YDL077C REV7P38927 245 aa1.14□□□□□ -2.23
VAM6YDL077C TMN3P40071 706 aa1.14□□□□□ -2.23
VAM6YDL077C YJL070CP40361 888 aa1.14□□□□□ -2.23
VAM6YDL077C ESL1P40456 1118 aa1.14□□□□□ -2.23
VAM6YDL077C CAB2P40506 365 aa1.14□□□□□ -2.23
VAM6YDL077C CIN5P40917 295 aa1.14□□□□□ -2.23
VAM6YDL077C UBP6P43593 499 aaKnown RBP1.14□□□□□ -2.23
VAM6YDL077C ALG2P43636 503 aa1.14□□□□□ -2.23
VAM6YDL077C GLG2P47011 380 aa1.14□□□□□ -2.23
VAM6YDL077C TIM54P47045 478 aa1.14□□□□□ -2.23
VAM6YDL077C APS3P47064 194 aa1.14□□□□□ -2.23
VAM6YDL077C YJR008WP47085 338 aa1.14□□□□□ -2.23
VAM6YDL077C ALD2P47771 506 aa1.14□□□□□ -2.23
VAM6YDL077C CTH1P47976 325 aa1.14□□□□□ -2.23
VAM6YDL077C SAP4P53036 818 aa1.14□□□□□ -2.23
VAM6YDL077C YGL242CP53066 181 aa1.14□□□□□ -2.23
VAM6YDL077C ARO8P53090 500 aaKnown RBP1.14□□□□□ -2.23
Retrieved 100 of 5,963 RNA–protein pairs in 102.2 ms