RNA–Protein interactions for RNA: YCR088W

ABP1, Transcript of Actin-binding protein of the cortical actin cytoskeleton, yeastyeast

Gene ABP1, Length 1,779 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ABP1YCR088W IWR1Q07532 353 aaPredicted RBP8.33□□□□□ -1.08
ABP1YCR088W ADE3P07245 946 aaKnown RBP8.32□□□□□ -1.08
ABP1YCR088W MSM1P22438 575 aa8.32□□□□□ -1.08
ABP1YCR088W MRPL25P23369 157 aa8.32□□□□□ -1.08
ABP1YCR088W SPT5P27692 1063 aaKnown RBP8.32□□□□□ -1.08
ABP1YCR088W YME2P32843 850 aa8.32□□□□□ -1.08
ABP1YCR088W CBR1P38626 284 aaKnown RBP8.32□□□□□ -1.08
ABP1YCR088W SPC97P38863 823 aa8.32□□□□□ -1.08
ABP1YCR088W MDJ2P42834 146 aa8.32□□□□□ -1.08
ABP1YCR088W YML6P51998 286 aa8.32□□□□□ -1.08
ABP1YCR088W COG6P53959 839 aa8.32□□□□□ -1.08
ABP1YCR088W ATP25Q03153 612 aa8.32□□□□□ -1.08
ABP1YCR088W YOR059CQ08448 450 aaKnown RBP8.32□□□□□ -1.08
ABP1YCR088W AI5_BETAQ9ZZX0 354 aa8.32□□□□□ -1.08
ABP1YCR088W PMS1P14242 873 aa8.31□□□□□ -1.08
ABP1YCR088W VMA1P17255 1071 aaKnown RBP8.31□□□□□ -1.08
ABP1YCR088W PWP1P21304 576 aaKnown RBP8.31□□□□□ -1.08
ABP1YCR088W REC107P21651 314 aa8.31□□□□□ -1.08
ABP1YCR088W BUD14P27637 709 aa8.31□□□□□ -1.08
ABP1YCR088W SSE1P32589 693 aaKnown RBP8.31□□□□□ -1.08
ABP1YCR088W TMT1P32643 299 aa8.31□□□□□ -1.08
ABP1YCR088W COT1P32798 439 aa8.31□□□□□ -1.08
ABP1YCR088W SLX5P32828 619 aaKnown RBP8.31□□□□□ -1.08
ABP1YCR088W RFC3P38629 340 aa8.31□□□□□ -1.08
ABP1YCR088W DYS1P38791 387 aa8.31□□□□□ -1.08
ABP1YCR088W AIM21P40563 679 aa8.31□□□□□ -1.08
ABP1YCR088W ORC5P50874 479 aa8.31□□□□□ -1.08
ABP1YCR088W DRN1P53255 507 aaKnown RBP8.31□□□□□ -1.08
ABP1YCR088W ROD1Q02805 837 aa8.31□□□□□ -1.08
ABP1YCR088W SVF1Q05515 481 aa8.31□□□□□ -1.08
ABP1YCR088W GUD1Q07729 489 aa8.31□□□□□ -1.08
ABP1YCR088W YDR018CQ12185 396 aa8.31□□□□□ -1.08
ABP1YCR088W DED1P06634 604 aaKnown RBP8.3□□□□□ -1.08
ABP1YCR088W SEG2P34250 1132 aa8.3□□□□□ -1.08
ABP1YCR088W MCR1P36060 302 aaKnown RBP8.3□□□□□ -1.08
ABP1YCR088W PMC1P38929 1173 aaPredicted RBP8.3□□□□□ -1.08
ABP1YCR088W NPP2P39997 493 aa8.3□□□□□ -1.08
ABP1YCR088W ZAP1P47043 880 aa8.3□□□□□ -1.08
ABP1YCR088W YJL045WP47052 634 aa8.3□□□□□ -1.08
ABP1YCR088W YJL007CP47080 104 aa8.3□□□□□ -1.08
ABP1YCR088W INP52P50942 1183 aa8.3□□□□□ -1.08
ABP1YCR088W PUS2P53167 370 aa8.3□□□□□ -1.08
ABP1YCR088W RTT102P53330 157 aa8.3□□□□□ -1.08
ABP1YCR088W IVY1Q04934 453 aa8.3□□□□□ -1.08
ABP1YCR088W IES4Q08561 116 aa8.3□□□□□ -1.08
ABP1YCR088W ECM3Q99252 613 aa8.3□□□□□ -1.08
ABP1YCR088W YPT6Q99260 215 aa8.3□□□□□ -1.08
ABP1YCR088W RPS3P05750 240 aaKnown RBP8.3□□□□□ -1.08
ABP1YCR088W TUB3P09734 445 aaKnown RBP8.3□□□□□ -1.08
ABP1YCR088W CDC24P11433 854 aaPredicted RBP8.3□□□□□ -1.08
ABP1YCR088W GCD2P12754 651 aaPredicted RBP8.3□□□□□ -1.08
ABP1YCR088W RRT12P25381 491 aa8.3□□□□□ -1.08
ABP1YCR088W MCM5P29496 775 aaKnown RBP8.3□□□□□ -1.08
ABP1YCR088W PCA1P38360 1216 aa8.3□□□□□ -1.08
ABP1YCR088W SMF2P38778 549 aa8.3□□□□□ -1.08
ABP1YCR088W YIL001WP40560 513 aa8.3□□□□□ -1.08
ABP1YCR088W SBE2P42223 864 aaKnown RBP8.3□□□□□ -1.08
ABP1YCR088W TAF6P53040 516 aa8.3□□□□□ -1.08
ABP1YCR088W UBP2Q01476 1272 aa8.3□□□□□ -1.08
ABP1YCR088W UBX5Q06682 500 aa8.3□□□□□ -1.08
ABP1YCR088W FAP7Q12055 197 aaPredicted RBP8.3□□□□□ -1.08
ABP1YCR088W APM2P38700 605 aa8.29□□□□□ -1.08
ABP1YCR088W LIN1P38852 340 aaPredicted RBP8.29□□□□□ -1.08
ABP1YCR088W ASN1P49089 572 aaKnown RBP8.29□□□□□ -1.08
ABP1YCR088W YGR117CP53270 476 aa8.29□□□□□ -1.08
ABP1YCR088W BET4Q00618 327 aa8.29□□□□□ -1.08
ABP1YCR088W ATG20Q07528 640 aa8.29□□□□□ -1.08
ABP1YCR088W TRE1Q08919 783 aa8.29□□□□□ -1.08
ABP1YCR088W EST1P17214 699 aaPredicted RBP8.28□□□□□ -1.08
ABP1YCR088W MRM1P25270 412 aa8.28□□□□□ -1.08
ABP1YCR088W KAR4P25583 335 aa8.28□□□□□ -1.08
ABP1YCR088W KIP2P28743 706 aa8.28□□□□□ -1.08
ABP1YCR088W ABD1P32783 436 aaPredicted RBP8.28□□□□□ -1.08
ABP1YCR088W SET3P36124 751 aa8.28□□□□□ -1.08
ABP1YCR088W KHA1P40309 873 aa8.28□□□□□ -1.08
ABP1YCR088W YNL146WP53906 100 aa8.28□□□□□ -1.08
ABP1YCR088W TEP1P53916 434 aa8.28□□□□□ -1.08
ABP1YCR088W LGE1Q02796 332 aaKnown RBP8.28□□□□□ -1.08
ABP1YCR088W YDR090CQ03193 310 aa8.28□□□□□ -1.08
ABP1YCR088W BUD22Q04347 519 aaKnown RBP8.28□□□□□ -1.08
ABP1YCR088W COQ9Q05779 260 aa8.28□□□□□ -1.08
ABP1YCR088W SUB2Q07478 446 aaKnown RBP8.28□□□□□ -1.08
ABP1YCR088W GPN2Q08726 347 aaPredicted RBP8.28□□□□□ -1.08
ABP1YCR088W YLR053CQ12026 108 aa8.28□□□□□ -1.08
ABP1YCR088W TRM11Q12463 433 aa8.28□□□□□ -1.08
ABP1YCR088W SSC1P0CS90 654 aaKnown RBP8.27□□□□□ -1.08
ABP1YCR088W SPS22P25380 463 aa8.27□□□□□ -1.08
ABP1YCR088W FET4P40988 552 aa8.27□□□□□ -1.08
ABP1YCR088W RGD2P43556 714 aa8.27□□□□□ -1.08
ABP1YCR088W UBP15P50101 1230 aa8.27□□□□□ -1.08
ABP1YCR088W BIO4P53630 237 aa8.27□□□□□ -1.08
ABP1YCR088W SPO19Q03029 223 aa8.27□□□□□ -1.08
ABP1YCR088W STE20Q03497 939 aaKnown RBP8.27□□□□□ -1.08
ABP1YCR088W CDC73Q06697 393 aa8.27□□□□□ -1.08
ABP1YCR088W ISA1Q07821 250 aaPredicted RBP8.27□□□□□ -1.08
ABP1YCR088W ABP140Q08641 628 aaKnown RBP8.27□□□□□ -1.08
ABP1YCR088W MOT1P32333 1867 aa8.27□□□□□ -1.09
ABP1YCR088W MRPS28P21771 286 aa8.27□□□□□ -1.09
ABP1YCR088W TRX1P22217 103 aaKnown RBP8.27□□□□□ -1.09
ABP1YCR088W CLB4P24871 460 aa8.27□□□□□ -1.09
Retrieved 100 of 5,963 RNA–protein pairs in 28.8 ms