RNA–Protein interactions for RNA: snR58

snR58, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR58, Length 96 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR58snR58 VPS36Q06696 566 aa-1.26□□□□□ -2.61
snR58snR58 YLR111WQ12528 110 aa-1.26□□□□□ -2.61
snR58snR58 YKL033W-AQ86ZR7 236 aa-1.26□□□□□ -2.61
snR58snR58 PRP8P33334 2413 aaKnown RBP-1.26□□□□□ -2.61
snR58snR58 VMA4P22203 233 aaKnown RBP-1.27□□□□□ -2.61
snR58snR58 DBP2P24783 546 aaKnown RBP-1.27□□□□□ -2.61
snR58snR58 SLA2P33338 968 aa-1.27□□□□□ -2.61
snR58snR58 YEL1P34225 687 aa-1.27□□□□□ -2.61
snR58snR58 RDH54P38086 958 aa-1.27□□□□□ -2.61
snR58snR58 IRR1P40541 1150 aa-1.27□□□□□ -2.61
snR58snR58 FHN1P53279 174 aa-1.27□□□□□ -2.61
snR58snR58 TEX1P53851 422 aaKnown RBP-1.27□□□□□ -2.61
snR58snR58 YML020WQ03722 664 aa-1.27□□□□□ -2.61
snR58snR58 SWM1Q12379 170 aa-1.27□□□□□ -2.61
snR58snR58 PRM7Q12459 698 aa-1.27□□□□□ -2.61
snR58snR58 YML002WP0CF17 737 aa-1.28□□□□□ -2.61
snR58snR58 THR1P17423 357 aaKnown RBP-1.28□□□□□ -2.61
snR58snR58 SPB4P25808 606 aaPredicted RBP-1.28□□□□□ -2.61
snR58snR58 SEC1P30619 724 aaKnown RBP-1.28□□□□□ -2.61
snR58snR58 NPP2P39997 493 aa-1.28□□□□□ -2.61
snR58snR58 EST2Q06163 884 aa-1.28□□□□□ -2.61
snR58snR58 ECM7Q06200 448 aa-1.28□□□□□ -2.61
snR58snR58 TGL5Q12043 749 aa-1.28□□□□□ -2.61
snR58snR58 GNT1Q12096 491 aa-1.28□□□□□ -2.61
snR58snR58 ARP6Q12509 438 aa-1.28□□□□□ -2.61
snR58snR58 CYB2P00175 591 aa-1.29□□□□□ -2.62
snR58snR58 NAM2P11325 894 aa-1.29□□□□□ -2.62
snR58snR58 CDC23P16522 626 aa-1.29□□□□□ -2.62
snR58snR58 SPR1P32603 445 aa-1.29□□□□□ -2.62
snR58snR58 RPT3P33298 428 aaKnown RBP-1.29□□□□□ -2.62
snR58snR58 APL3P38065 1025 aa-1.29□□□□□ -2.62
snR58snR58 RKM3P38222 552 aa-1.29□□□□□ -2.62
snR58snR58 COS111P38308 924 aa-1.29□□□□□ -2.62
snR58snR58 REV7P38927 245 aa-1.29□□□□□ -2.62
snR58snR58 RVS167P39743 482 aaKnown RBP-1.29□□□□□ -2.62
snR58snR58 SDP1P40479 209 aa-1.29□□□□□ -2.62
snR58snR58 VHR1P40522 640 aa-1.29□□□□□ -2.62
snR58snR58 YGL039WP53183 348 aaKnown RBP-1.29□□□□□ -2.62
snR58snR58 YLR152CP54072 576 aa-1.29□□□□□ -2.62
snR58snR58 TAH18Q12181 623 aa-1.29□□□□□ -2.62
snR58snR58 MDM20Q12387 796 aaKnown RBP-1.29□□□□□ -2.62
snR58snR58 SEC3P33332 1336 aaKnown RBP-1.3□□□□□ -2.62
snR58snR58 LAM4P38800 1345 aa-1.3□□□□□ -2.62
snR58snR58 BAR1P12630 587 aa-1.3□□□□□ -2.62
snR58snR58 PKC1P24583 1151 aa-1.3□□□□□ -2.62
snR58snR58 MLS1P30952 554 aa-1.3□□□□□ -2.62
snR58snR58 TSL1P38427 1098 aaKnown RBP-1.3□□□□□ -2.62
snR58snR58 KSP1P38691 1029 aaKnown RBP-1.3□□□□□ -2.62
snR58snR58 NIT3P49954 291 aa-1.3□□□□□ -2.62
snR58snR58 YNR021WP53723 404 aaKnown RBP-1.3□□□□□ -2.62
snR58snR58 SFB2P53953 876 aa-1.3□□□□□ -2.62
snR58snR58 RSC4Q02206 625 aa-1.3□□□□□ -2.62
snR58snR58 NRG1Q03125 231 aa-1.3□□□□□ -2.62
snR58snR58 BSP1Q06604 576 aa-1.3□□□□□ -2.62
snR58snR58 PUN1Q06991 263 aa-1.3□□□□□ -2.62
snR58snR58 ACM1Q08981 209 aa-1.3□□□□□ -2.62
snR58snR58 GAL4P04386 881 aa-1.31□□□□□ -2.62
snR58snR58 RPL11AP0C0W9 174 aaKnown RBP-1.31□□□□□ -2.62
snR58snR58 ACO1P19414 778 aaKnown RBP RIP-Chip data-1.31□□□□□ -2.62not detected
snR58snR58 PER1P25625 357 aa-1.31□□□□□ -2.62
snR58snR58 CPS1P27614 576 aa-1.31□□□□□ -2.62
snR58snR58 BUD14P27637 709 aa-1.31□□□□□ -2.62
snR58snR58 ARO2P28777 376 aaKnown RBP-1.31□□□□□ -2.62
snR58snR58 MVD1P32377 396 aaKnown RBP-1.31□□□□□ -2.62
snR58snR58 FMO1P38866 432 aa-1.31□□□□□ -2.62
snR58snR58 YJL043WP47053 257 aa-1.31□□□□□ -2.62
snR58snR58 NUP57P48837 541 aa-1.31□□□□□ -2.62
snR58snR58 FMP42Q04991 504 aa-1.31□□□□□ -2.62
snR58snR58 YPR091CQ06833 770 aa-1.31□□□□□ -2.62
snR58snR58 ATX2Q12067 313 aa-1.31□□□□□ -2.62
snR58snR58 RPL11BQ3E757 174 aaPredicted RBP-1.31□□□□□ -2.62
snR58snR58 PDA1P16387 420 aaKnown RBP-1.32□□□□□ -2.62
snR58snR58 LRE1P25579 583 aaKnown RBP-1.32□□□□□ -2.62
snR58snR58 YKL151CP36059 337 aa-1.32□□□□□ -2.62
snR58snR58 UBX7P38349 436 aa-1.32□□□□□ -2.62
snR58snR58 PEX28P38848 579 aa-1.32□□□□□ -2.62
snR58snR58 BAP3P41815 604 aa-1.32□□□□□ -2.62
snR58snR58 PMT6P42934 759 aa-1.32□□□□□ -2.62
snR58snR58 NBP1P52919 319 aaPredicted RBP-1.32□□□□□ -2.62
snR58snR58 YGL117WP53133 265 aa-1.32□□□□□ -2.62
snR58snR58 YBP2P53169 641 aa-1.32□□□□□ -2.62
snR58snR58 ECM23Q02710 187 aa-1.32□□□□□ -2.62
snR58snR58 SRT1Q03175 343 aa-1.32□□□□□ -2.62
snR58snR58 FBP1P09201 348 aa-1.33□□□□□ -2.62
snR58snR58 PMS1P14242 873 aa-1.33□□□□□ -2.62
snR58snR58 SWC3P31376 625 aa-1.33□□□□□ -2.62
snR58snR58 PRO3P32263 286 aaKnown RBP-1.33□□□□□ -2.62
snR58snR58 SHP1P34223 423 aa-1.33□□□□□ -2.62
snR58snR58 YHR097CP38809 366 aaKnown RBP-1.33□□□□□ -2.62
snR58snR58 BZZ1P38822 633 aa-1.33□□□□□ -2.62
snR58snR58 CTF8P38877 133 aa-1.33□□□□□ -2.62
snR58snR58 CCT3P39077 534 aaKnown RBP-1.33□□□□□ -2.62
snR58snR58 RSM26P47141 266 aa-1.33□□□□□ -2.62
snR58snR58 GNP1P48813 663 aa-1.33□□□□□ -2.62
snR58snR58 RAI1P53063 387 aaKnown RBP-1.33□□□□□ -2.62
snR58snR58 MTL1P53214 551 aa-1.33□□□□□ -2.62
snR58snR58 TAM41P53230 385 aa-1.33□□□□□ -2.62
snR58snR58 YGR151CP53287 111 aa-1.33□□□□□ -2.62
snR58snR58 ASI2P53895 289 aa-1.33□□□□□ -2.62
snR58snR58 PAL1Q05518 499 aaKnown RBP-1.33□□□□□ -2.62
Retrieved 100 of 5,963 RNA–protein pairs in 30.7 ms