RNA–Protein interactions for RNA: snR47

snR47, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR47, Length 99 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR47snR47 GRS2Q06817 618 aa0.67□□□□□ -2.3
snR47snR47 TMA46Q12000 345 aaKnown RBP0.67□□□□□ -2.3
snR47snR47 GPR1Q12361 961 aa0.67□□□□□ -2.3
snR47snR47 YER190C-BP0CX94 160 aa0.66□□□□□ -2.3
snR47snR47 YEL077W-AP0CX95 160 aa0.66□□□□□ -2.3
snR47snR47 YGR296C-BP0CX96 160 aa0.66□□□□□ -2.3
snR47snR47 YPL283W-BP0CX97 160 aa0.66□□□□□ -2.3
snR47snR47 YPR204C-AP0CX98 160 aa0.66□□□□□ -2.3
snR47snR47 NPP1P25353 742 aa0.66□□□□□ -2.3
snR47snR47 RPT1P33299 467 aaKnown RBP0.66□□□□□ -2.3
snR47snR47 AFR1P33304 620 aa0.66□□□□□ -2.3
snR47snR47 ECM1P39715 212 aa0.66□□□□□ -2.3
snR47snR47 FCP1Q03254 732 aa0.66□□□□□ -2.3
snR47snR47 MRPL1Q04599 285 aa0.66□□□□□ -2.3
snR47snR47 SUB2Q07478 446 aaKnown RBP0.66□□□□□ -2.3
snR47snR47 NRT1Q08485 598 aa0.66□□□□□ -2.3
snR47snR47 BMS1Q08965 1183 aaKnown RBP0.66□□□□□ -2.3
snR47snR47 USV1Q12132 391 aa0.66□□□□□ -2.3
snR47snR47 LEU2P04173 364 aaPredicted RBP0.65□□□□□ -2.31
snR47snR47 TPK2P06245 380 aa0.65□□□□□ -2.31
snR47snR47 YCP4P25349 247 aaKnown RBP0.65□□□□□ -2.31
snR47snR47 URA1P28272 314 aaPredicted RBP0.65□□□□□ -2.31
snR47snR47 MVD1P32377 396 aaKnown RBP0.65□□□□□ -2.31
snR47snR47 FMP46P36141 133 aaKnown RBP0.65□□□□□ -2.31
snR47snR47 YBR259WP38338 688 aa0.65□□□□□ -2.31
snR47snR47 YHL050CP38721 697 aa0.65□□□□□ -2.31
snR47snR47 YHR219WP38900 624 aa0.65□□□□□ -2.31
snR47snR47 SAK1P38990 1142 aa0.65□□□□□ -2.31
snR47snR47 LYS9P38999 446 aa0.65□□□□□ -2.31
snR47snR47 NUP60P39705 539 aa0.65□□□□□ -2.31
snR47snR47 MTL1P53214 551 aa0.65□□□□□ -2.31
snR47snR47 SPC98P53540 846 aa0.65□□□□□ -2.31
snR47snR47 ADD37Q03233 198 aa0.65□□□□□ -2.31
snR47snR47 GAD1Q04792 585 aa0.65□□□□□ -2.31
snR47snR47 YMR317WQ04893 1140 aa0.65□□□□□ -2.31
snR47snR47 SNA4Q07549 140 aa0.65□□□□□ -2.31
snR47snR47 HER1Q12276 1246 aa0.65□□□□□ -2.31
snR47snR47 CRC1Q12289 327 aa0.65□□□□□ -2.31
snR47snR47 CSR2Q12734 1121 aa0.65□□□□□ -2.31
snR47snR47 AAD3P25612 363 aa0.64□□□□□ -2.31
snR47snR47 PPX1P38698 397 aa0.64□□□□□ -2.31
snR47snR47 FLO5P38894 1075 aa0.64□□□□□ -2.31
snR47snR47 SNF7P39929 240 aaKnown RBP0.64□□□□□ -2.31
snR47snR47 CEP3P40969 608 aa0.64□□□□□ -2.31
snR47snR47 GUS1P46655 708 aaKnown RBP RIP-Chip data0.64□□□□□ -2.31not detected
snR47snR47 IDP3P53982 420 aaKnown RBP0.64□□□□□ -2.31
snR47snR47 EEB1Q02891 456 aa0.64□□□□□ -2.31
snR47snR47 PRP16P15938 1071 aaPredicted RBP0.63□□□□□ -2.31
snR47snR47 YAP1P19880 650 aaKnown RBP0.63□□□□□ -2.31
snR47snR47 RFA1P22336 621 aaKnown RBP0.63□□□□□ -2.31
snR47snR47 DUT1P33317 147 aa0.63□□□□□ -2.31
snR47snR47 RRT2P38332 387 aa0.63□□□□□ -2.31
snR47snR47 DHH1P39517 506 aaKnown RBP0.63□□□□□ -2.31
snR47snR47 YMR124WP39523 943 aaKnown RBP0.63□□□□□ -2.31
snR47snR47 IRR1P40541 1150 aa0.63□□□□□ -2.31
snR47snR47 LYS20P48570 428 aaKnown RBP0.63□□□□□ -2.31
snR47snR47 SHE10P53075 577 aa0.63□□□□□ -2.31
snR47snR47 TYW3P53177 273 aa0.63□□□□□ -2.31
snR47snR47 RPL34AP87262 121 aaPredicted RBP0.63□□□□□ -2.31
snR47snR47 DUS3Q06053 668 aaKnown RBP0.63□□□□□ -2.31
snR47snR47 RGC1Q06108 1083 aaKnown RBP0.63□□□□□ -2.31
snR47snR47 RSA1Q08932 381 aa0.63□□□□□ -2.31
snR47snR47 HAL9Q12180 1030 aa0.63□□□□□ -2.31
snR47snR47 CLF1Q12309 687 aaPredicted RBP0.63□□□□□ -2.31
snR47snR47 YEL076C-AP0CX16 216 aa0.62□□□□□ -2.31
snR47snR47 YLR464WP0CX17 216 aa0.62□□□□□ -2.31
snR47snR47 REV1P12689 985 aa0.62□□□□□ -2.31
snR47snR47 YEL076CP39971 216 aa0.62□□□□□ -2.31
snR47snR47 SSY5P47002 699 aa0.62□□□□□ -2.31
snR47snR47 YGL117WP53133 265 aa0.62□□□□□ -2.31
snR47snR47 YGR151CP53287 111 aa0.62□□□□□ -2.31
snR47snR47 ZRT2Q12436 422 aa0.62□□□□□ -2.31
snR47snR47 YIL152WP40455 235 aa0.61□□□□□ -2.31
snR47snR47 BST1P43571 1029 aa0.61□□□□□ -2.31
snR47snR47 JSN1P47135 1091 aaKnown RBP RIP-Chip data0.61□□□□□ -2.31not detected
snR47snR47 BUL2Q03758 920 aaKnown RBP0.61□□□□□ -2.31
snR47snR47 CTK1Q03957 528 aaKnown RBP0.61□□□□□ -2.31
snR47snR47 WHI5Q12416 295 aa0.61□□□□□ -2.31
snR47snR47 PMA2P19657 947 aa0.6□□□□□ -2.31
snR47snR47 YCR043CP25361 127 aa0.6□□□□□ -2.31
snR47snR47 PET112P33893 541 aa0.6□□□□□ -2.31
snR47snR47 MRPL4P36517 319 aa0.6□□□□□ -2.31
snR47snR47 APD1P38281 316 aa0.6□□□□□ -2.31
snR47snR47 KSP1P38691 1029 aaKnown RBP0.6□□□□□ -2.31
snR47snR47 RPS26AP39938 119 aaKnown RBP0.6□□□□□ -2.31
snR47snR47 RPS26BP39939 119 aaKnown RBP0.6□□□□□ -2.31
snR47snR47 TES1P41903 349 aaKnown RBP0.6□□□□□ -2.31
snR47snR47 HOS2P53096 452 aaPredicted RBP0.6□□□□□ -2.31
snR47snR47 CPR8P53728 308 aa0.6□□□□□ -2.31
snR47snR47 IMP4P53941 290 aaKnown RBP0.6□□□□□ -2.31
snR47snR47 RPL15BP54780 204 aaPredicted RBP0.6□□□□□ -2.31
snR47snR47 YDR179W-AQ03983 463 aa0.6□□□□□ -2.31
snR47snR47 YLR225CQ05948 407 aaKnown RBP0.6□□□□□ -2.31
snR47snR47 MDM20Q12387 796 aaKnown RBP0.6□□□□□ -2.31
snR47snR47 RPS9AO13516 197 aaKnown RBP0.59□□□□□ -2.31
snR47snR47 ABF1P14164 731 aa0.59□□□□□ -2.31
snR47snR47 SAN1P22470 610 aa0.59□□□□□ -2.31
snR47snR47 SIT1P39980 628 aa0.59□□□□□ -2.31
snR47snR47 CFD1P40558 293 aa0.59□□□□□ -2.31
snR47snR47 PMT6P42934 759 aa0.59□□□□□ -2.31
Retrieved 100 of 5,963 RNA–protein pairs in 53.9 ms