RNA–Protein interactions for RNA: YPL045W

VPS16, Transcript of Subunit of the HOPS and the CORVET complexes, yeastyeast

Gene VPS16, Length 2,397 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS16YPL045W BLS1Q06071 122 aa2.68□□□□□ -1.98
VPS16YPL045W OPY2Q06810 360 aa2.68□□□□□ -1.98
VPS16YPL045W THI21Q08975 551 aa2.68□□□□□ -1.98
VPS16YPL045W CWC2Q12046 339 aaPredicted RBP2.68□□□□□ -1.98
VPS16YPL045W NUR1Q12066 484 aa2.68□□□□□ -1.98
VPS16YPL045W HAL9Q12180 1030 aa2.68□□□□□ -1.98
VPS16YPL045W BUD4P47136 1447 aa2.68□□□□□ -1.98
VPS16YPL045W SWI6P09959 803 aa2.67□□□□□ -1.98
VPS16YPL045W CDC26P14724 124 aa2.67□□□□□ -1.98
VPS16YPL045W GFA1P14742 717 aaKnown RBP2.67□□□□□ -1.98
VPS16YPL045W RPD3P32561 433 aa2.67□□□□□ -1.98
VPS16YPL045W JNM1P36224 373 aa2.67□□□□□ -1.98
VPS16YPL045W RRM3P38766 723 aa2.67□□□□□ -1.98
VPS16YPL045W EAF5P39995 279 aa2.67□□□□□ -1.98
VPS16YPL045W BNA1P47096 177 aa2.67□□□□□ -1.98
VPS16YPL045W YJR039WP47107 1121 aa2.67□□□□□ -1.98
VPS16YPL045W ZIP2P53061 704 aa2.67□□□□□ -1.98
VPS16YPL045W PCL10P53124 433 aa2.67□□□□□ -1.98
VPS16YPL045W SVS1Q12254 260 aa2.67□□□□□ -1.98
VPS16YPL045W ATG2P53855 1592 aa2.67□□□□□ -1.98
VPS16YPL045W SSM4P40318 1319 aa2.67□□□□□ -1.98
VPS16YPL045W RPS9AO13516 197 aaKnown RBP2.67□□□□□ -1.98
VPS16YPL045W CDC31P06704 161 aaKnown RBP2.67□□□□□ -1.98
VPS16YPL045W PHO3P24031 467 aa2.67□□□□□ -1.98
VPS16YPL045W RER1P25560 188 aa2.67□□□□□ -1.98
VPS16YPL045W APL2P36000 726 aaPredicted RBP2.67□□□□□ -1.98
VPS16YPL045W SRP68P38687 599 aaKnown RBP2.67□□□□□ -1.98
VPS16YPL045W YHL012WP38709 493 aa2.67□□□□□ -1.98
VPS16YPL045W SRB7P47822 140 aa2.67□□□□□ -1.98
VPS16YPL045W HOL1P53389 586 aa2.67□□□□□ -1.98
VPS16YPL045W SRC1Q03707 834 aa2.67□□□□□ -1.98
VPS16YPL045W TSR2Q06672 205 aaKnown RBP2.67□□□□□ -1.98
VPS16YPL045W YPL277CQ08989 487 aa2.67□□□□□ -1.98
VPS16YPL045W MED1Q12321 566 aa2.67□□□□□ -1.98
VPS16YPL045W NSI1Q12457 570 aa2.67□□□□□ -1.98
VPS16YPL045W TRK2P28584 889 aa2.66□□□□□ -1.98
VPS16YPL045W RRN3P36070 627 aa2.66□□□□□ -1.98
VPS16YPL045W ACO2P39533 789 aa2.66□□□□□ -1.98
VPS16YPL045W SAW1P39735 261 aa2.66□□□□□ -1.98
VPS16YPL045W ESL1P40456 1118 aa2.66□□□□□ -1.98
VPS16YPL045W VID28P40547 921 aa2.66□□□□□ -1.98
VPS16YPL045W IRC5P43610 853 aa2.66□□□□□ -1.98
VPS16YPL045W BFA1P47113 574 aa2.66□□□□□ -1.98
VPS16YPL045W PUS4P48567 403 aaKnown RBP2.66□□□□□ -1.98
VPS16YPL045W BRE5P53741 515 aaKnown RBP2.66□□□□□ -1.98
VPS16YPL045W NOP15P53927 220 aaPredicted RBP2.66□□□□□ -1.98
VPS16YPL045W MAP1Q01662 387 aaKnown RBP RIP-Chip data2.66□□□□□ -1.98not detected
VPS16YPL045W YMR018WQ04364 514 aa2.66□□□□□ -1.98
VPS16YPL045W SSL1Q04673 461 aaPredicted RBP2.66□□□□□ -1.98
VPS16YPL045W NGL1Q08213 363 aaKnown RBP2.66□□□□□ -1.98
VPS16YPL045W ARP7Q12406 477 aa2.66□□□□□ -1.98
VPS16YPL045W KCS1Q12494 1050 aa2.66□□□□□ -1.98
VPS16YPL045W SSK2P53599 1579 aa2.66□□□□□ -1.98
VPS16YPL045W SRO9P25567 434 aaKnown RBP2.66□□□□□ -1.98
VPS16YPL045W APM3P38153 483 aa2.66□□□□□ -1.98
VPS16YPL045W POA1P38218 177 aa2.66□□□□□ -1.98
VPS16YPL045W YHR202WP38887 602 aa2.66□□□□□ -1.98
VPS16YPL045W BEM4P39011 633 aa2.66□□□□□ -1.98
VPS16YPL045W SPC72P39723 622 aa2.66□□□□□ -1.98
VPS16YPL045W STL1P39932 569 aa2.66□□□□□ -1.98
VPS16YPL045W RAI1P53063 387 aaKnown RBP2.66□□□□□ -1.98
VPS16YPL045W LEE1Q02799 301 aaKnown RBP2.66□□□□□ -1.98
VPS16YPL045W YDR444WQ04093 687 aa2.66□□□□□ -1.98
VPS16YPL045W EIS1Q05050 843 aaKnown RBP2.66□□□□□ -1.98
VPS16YPL045W YLR407WQ06070 228 aa2.66□□□□□ -1.98
VPS16YPL045W RSB1Q08417 382 aa2.66□□□□□ -1.98
VPS16YPL045W YVC1Q12324 675 aa2.66□□□□□ -1.98
VPS16YPL045W PEP1P32319 1579 aa2.66□□□□□ -1.98
VPS16YPL045W MDS3P53094 1487 aa2.65□□□□□ -1.98
VPS16YPL045W ESP1Q03018 1630 aa2.65□□□□□ -1.98
VPS16YPL045W ADH4P10127 382 aa2.65□□□□□ -1.98
VPS16YPL045W MET22P32179 357 aa2.65□□□□□ -1.98
VPS16YPL045W HXT4P32467 576 aa2.65□□□□□ -1.98
VPS16YPL045W NGG1P32494 702 aa2.65□□□□□ -1.98
VPS16YPL045W MDL2P33311 773 aa2.65□□□□□ -1.98
VPS16YPL045W AKL1P38080 1108 aaKnown RBP2.65□□□□□ -1.98
VPS16YPL045W VPS8P39702 1274 aa2.65□□□□□ -1.98
VPS16YPL045W RAD26P40352 1085 aa2.65□□□□□ -1.98
VPS16YPL045W MAD3P47074 515 aa2.65□□□□□ -1.98
VPS16YPL045W ARC35P53731 342 aaKnown RBP2.65□□□□□ -1.98
VPS16YPL045W RSC58Q07979 502 aa2.65□□□□□ -1.98
VPS16YPL045W SDH5Q08230 162 aa2.65□□□□□ -1.98
VPS16YPL045W MF(ALPHA)2P32435 120 aa2.65□□□□□ -1.99
VPS16YPL045W SDS22P36047 338 aa2.65□□□□□ -1.99
VPS16YPL045W YKR075CP36155 307 aa2.65□□□□□ -1.99
VPS16YPL045W RFC5P38251 354 aa2.65□□□□□ -1.99
VPS16YPL045W MIP6P38760 659 aaKnown RBP2.65□□□□□ -1.99
VPS16YPL045W SCS2P40075 244 aaKnown RBP2.65□□□□□ -1.99
VPS16YPL045W YIL108WP40483 696 aaKnown RBP2.65□□□□□ -1.99
VPS16YPL045W SMK1P41808 388 aa2.65□□□□□ -1.99
VPS16YPL045W PUS2P53167 370 aa2.65□□□□□ -1.99
VPS16YPL045W DUS1P53759 423 aaKnown RBP2.65□□□□□ -1.99
VPS16YPL045W GPD1Q00055 391 aaKnown RBP2.65□□□□□ -1.99
VPS16YPL045W MTD1Q02046 320 aaKnown RBP2.65□□□□□ -1.99
VPS16YPL045W GAS5Q08193 484 aa2.65□□□□□ -1.99
VPS16YPL045W SNU66Q12420 587 aaPredicted RBP2.65□□□□□ -1.99
VPS16YPL045W ECM5Q03214 1411 aa2.64□□□□□ -1.99
VPS16YPL045W SNF1P06782 633 aaKnown RBP2.64□□□□□ -1.99
VPS16YPL045W FBP1P09201 348 aa2.64□□□□□ -1.99
VPS16YPL045W NCP1P16603 691 aaKnown RBP2.64□□□□□ -1.99
Retrieved 100 of 5,963 RNA–protein pairs in 52.3 ms