RNA–Protein interactions for RNA: YPL002C

SNF8, Transcript of Component of the ESCRT-II complex, yeastyeast

Gene SNF8, Length 702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNF8YPL002C RRG1Q12167 365 aaPredicted RBP5.22□□□□□ -1.57
SNF8YPL002C AGP1P25376 633 aa5.21□□□□□ -1.58
SNF8YPL002C SBA1P28707 216 aaKnown RBP5.21□□□□□ -1.58
SNF8YPL002C MAL31P38156 614 aa5.21□□□□□ -1.58
SNF8YPL002C AIM39Q08223 395 aa5.21□□□□□ -1.58
SNF8YPL002C KAR4P25583 335 aa5.2□□□□□ -1.58
SNF8YPL002C BUL1P48524 976 aa5.2□□□□□ -1.58
SNF8YPL002C SRP1Q02821 542 aaKnown RBP5.2□□□□□ -1.58
SNF8YPL002C RBA50Q04418 439 aa5.2□□□□□ -1.58
SNF8YPL002C DUS3Q06053 668 aaKnown RBP5.2□□□□□ -1.58
SNF8YPL002C GSC2P40989 1895 aa5.2□□□□□ -1.58
SNF8YPL002C FIG2P25653 1609 aa5.19□□□□□ -1.58
SNF8YPL002C YKL069WP36088 180 aa5.19□□□□□ -1.58
SNF8YPL002C VBA5P36172 582 aa5.19□□□□□ -1.58
SNF8YPL002C VPS16Q03308 798 aa5.19□□□□□ -1.58
SNF8YPL002C UBX2Q04228 584 aa5.19□□□□□ -1.58
SNF8YPL002C ENB1Q08299 606 aa5.19□□□□□ -1.58
SNF8YPL002C SSK22P25390 1331 aaPredicted RBP5.19□□□□□ -1.58
SNF8YPL002C CBP1P07252 654 aa5.18□□□□□ -1.58
SNF8YPL002C FBP1P09201 348 aa5.18□□□□□ -1.58
SNF8YPL002C ATG19P35193 415 aa5.18□□□□□ -1.58
SNF8YPL002C APL2P36000 726 aaPredicted RBP5.18□□□□□ -1.58
SNF8YPL002C STV1P37296 890 aa5.18□□□□□ -1.58
SNF8YPL002C GUS1P46655 708 aaKnown RBP RIP-Chip data5.18□□□□□ -1.58not detected
SNF8YPL002C GYP7P48365 746 aa5.18□□□□□ -1.58
SNF8YPL002C PKH1Q03407 766 aa5.18□□□□□ -1.58
SNF8YPL002C VPS64Q03944 604 aa5.18□□□□□ -1.58
SNF8YPL002C PDS5Q04264 1277 aa5.18□□□□□ -1.58
SNF8YPL002C PIN2Q12057 282 aa5.18□□□□□ -1.58
SNF8YPL002C UPC2Q12151 913 aa5.18□□□□□ -1.58
SNF8YPL002C HKR1P41809 1802 aa5.18□□□□□ -1.58
SNF8YPL002C CLN2P20438 545 aa5.17□□□□□ -1.58
SNF8YPL002C PRI2P20457 528 aa5.17□□□□□ -1.58
SNF8YPL002C KRE2P27809 442 aa5.17□□□□□ -1.58
SNF8YPL002C RPC82P32349 654 aa5.17□□□□□ -1.58
SNF8YPL002C TSL1P38427 1098 aaKnown RBP5.17□□□□□ -1.58
SNF8YPL002C YER158CP40095 573 aa5.17□□□□□ -1.58
SNF8YPL002C CWC24P53769 259 aa5.17□□□□□ -1.58
SNF8YPL002C PPM2Q08282 695 aa5.17□□□□□ -1.58
SNF8YPL002C NPP1P25353 742 aa5.16□□□□□ -1.58
SNF8YPL002C EFT1P32324 842 aaKnown RBP5.16□□□□□ -1.58
SNF8YPL002C PAH1P32567 862 aa5.16□□□□□ -1.58
SNF8YPL002C MOH1P38191 138 aa5.16□□□□□ -1.58
SNF8YPL002C MAD1P40957 749 aa5.16□□□□□ -1.58
SNF8YPL002C YPR196WQ06595 470 aa5.16□□□□□ -1.58
SNF8YPL002C YLR040CQ07988 224 aa5.16□□□□□ -1.58
SNF8YPL002C OPI10Q08202 246 aa5.16□□□□□ -1.58
SNF8YPL002C CAD1P24813 409 aaKnown RBP5.15□□□□□ -1.59
SNF8YPL002C STE14P32584 239 aa5.15□□□□□ -1.59
SNF8YPL002C AFR1P33304 620 aa5.15□□□□□ -1.59
SNF8YPL002C OAR1P35731 278 aa5.15□□□□□ -1.59
SNF8YPL002C KRI1P42846 591 aaKnown RBP5.15□□□□□ -1.59
SNF8YPL002C GSM1P42950 618 aa5.15□□□□□ -1.59
SNF8YPL002C RAI1P53063 387 aaKnown RBP5.15□□□□□ -1.59
SNF8YPL002C YVH1Q02256 364 aaKnown RBP5.15□□□□□ -1.59
SNF8YPL002C YDR306CQ06640 478 aa5.15□□□□□ -1.59
SNF8YPL002C ZDS1P50111 915 aaKnown RBP5.14□□□□□ -1.59
SNF8YPL002C SLU7Q02775 382 aaKnown RBP5.14□□□□□ -1.59
SNF8YPL002C PRP42Q03776 544 aaKnown RBP5.14□□□□□ -1.59
SNF8YPL002C SHE9Q04172 456 aa5.14□□□□□ -1.59
SNF8YPL002C GUP2Q08929 609 aa5.14□□□□□ -1.59
SNF8YPL002C YPT53P36019 220 aa5.13□□□□□ -1.59
SNF8YPL002C YKR078WP36158 585 aaKnown RBP5.13□□□□□ -1.59
SNF8YPL002C YKE2P52553 114 aa5.13□□□□□ -1.59
SNF8YPL002C YNL050CP53952 270 aa5.13□□□□□ -1.59
SNF8YPL002C JIP5Q06214 492 aaPredicted RBP5.13□□□□□ -1.59
SNF8YPL002C YOL073CQ08232 322 aa5.13□□□□□ -1.59
SNF8YPL002C LYS2P07702 1392 aa5.13□□□□□ -1.59
SNF8YPL002C NOT3P06102 836 aaKnown RBP5.12□□□□□ -1.59
SNF8YPL002C CDC48P25694 835 aaKnown RBP5.12□□□□□ -1.59
SNF8YPL002C YBR238CP38330 731 aaKnown RBP5.12□□□□□ -1.59
SNF8YPL002C PSF2P40359 213 aa5.12□□□□□ -1.59
SNF8YPL002C SSL1Q04673 461 aaPredicted RBP5.12□□□□□ -1.59
SNF8YPL002C AIM44Q99299 758 aa5.12□□□□□ -1.59
SNF8YPL002C SED4P25365 1065 aa5.11□□□□□ -1.59
SNF8YPL002C SUL1P38359 859 aa5.11□□□□□ -1.59
SNF8YPL002C MAM1P40065 302 aa5.11□□□□□ -1.59
SNF8YPL002C RPT4P53549 437 aaKnown RBP5.11□□□□□ -1.59
SNF8YPL002C ZDS2P54786 942 aa5.11□□□□□ -1.59
SNF8YPL002C TRM13Q12383 476 aa5.11□□□□□ -1.59
SNF8YPL002C BMS1Q08965 1183 aaKnown RBP5.1□□□□□ -1.59
SNF8YPL002C GIN4Q12263 1142 aa5.1□□□□□ -1.59
SNF8YPL002C TRP4P07285 380 aaPredicted RBP5.09□□□□□ -1.59
SNF8YPL002C ERG4P25340 473 aa5.09□□□□□ -1.59
SNF8YPL002C RPD3P32561 433 aa5.09□□□□□ -1.59
SNF8YPL002C STE13P33894 931 aa5.09□□□□□ -1.59
SNF8YPL002C KTR4P38131 464 aa5.09□□□□□ -1.59
SNF8YPL002C UBA2P52488 636 aa5.09□□□□□ -1.59
SNF8YPL002C ERG5P54781 538 aa5.09□□□□□ -1.59
SNF8YPL002C DNM1P54861 757 aa5.09□□□□□ -1.59
SNF8YPL002C RPS7AP26786 190 aaKnown RBP5.08□□□□□ -1.6
SNF8YPL002C MGM1P32266 881 aa5.08□□□□□ -1.6
SNF8YPL002C AAR2P32357 355 aaPredicted RBP5.08□□□□□ -1.6
SNF8YPL002C STE5P32917 917 aa5.08□□□□□ -1.6
SNF8YPL002C MRP8P35719 219 aa5.08□□□□□ -1.6
SNF8YPL002C YRO2P38079 344 aa5.08□□□□□ -1.6
SNF8YPL002C SPL2P38839 148 aa5.08□□□□□ -1.6
SNF8YPL002C YRB30P53107 440 aaPredicted RBP5.08□□□□□ -1.6
SNF8YPL002C NPL3Q01560 414 aaKnown RBP RIP-Chip data5.08□□□□□ -1.6not detected
SNF8YPL002C FCP1Q03254 732 aa5.08□□□□□ -1.6
Retrieved 100 of 5,963 RNA–protein pairs in 16 ms