RNA–Protein interactions for RNA: YOR142W

LSC1, Transcript of Alpha subunit of succinyl-CoA ligase, yeastyeast

Gene LSC1, Length 990 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSC1YOR142W SPO75Q07798 868 aa7.18□□□□□ -1.26
LSC1YOR142W GIS3Q12418 502 aa7.18□□□□□ -1.26
LSC1YOR142W TPK1P06244 397 aa7.17□□□□□ -1.26
LSC1YOR142W SCJ1P25303 377 aa7.17□□□□□ -1.26
LSC1YOR142W CBF2P32504 956 aa7.17□□□□□ -1.26
LSC1YOR142W SHM1P37292 490 aaPredicted RBP7.17□□□□□ -1.26
LSC1YOR142W ARL1P38116 183 aaKnown RBP7.17□□□□□ -1.26
LSC1YOR142W SIP5P40210 489 aaKnown RBP7.17□□□□□ -1.26
LSC1YOR142W OYE3P41816 400 aaPredicted RBP7.17□□□□□ -1.26
LSC1YOR142W CPR7P47103 393 aa7.17□□□□□ -1.26
LSC1YOR142W ALT1P52893 592 aa7.17□□□□□ -1.26
LSC1YOR142W RPA49Q01080 415 aaPredicted RBP7.17□□□□□ -1.26
LSC1YOR142W UBP3Q01477 912 aaKnown RBP RIP-Chip data7.17□□□□□ -1.26not detected
LSC1YOR142W WAR1Q03631 944 aa7.17□□□□□ -1.26
LSC1YOR142W GIR2Q03768 265 aaPredicted RBP7.17□□□□□ -1.26
LSC1YOR142W PPM1Q04081 328 aa7.17□□□□□ -1.26
LSC1YOR142W YLR257WQ06146 321 aaKnown RBP7.17□□□□□ -1.26
LSC1YOR142W ABP140Q08641 628 aaKnown RBP7.17□□□□□ -1.26
LSC1YOR142W CWC2Q12046 339 aaPredicted RBP7.17□□□□□ -1.26
LSC1YOR142W YPR027CQ12079 277 aa7.17□□□□□ -1.26
LSC1YOR142W APM4Q99186 491 aa7.17□□□□□ -1.26
LSC1YOR142W ATP1P07251 545 aaKnown RBP7.16□□□□□ -1.26
LSC1YOR142W CHS1P08004 1131 aa7.16□□□□□ -1.26
LSC1YOR142W ROX1P25042 368 aa7.16□□□□□ -1.26
LSC1YOR142W RAD27P26793 382 aa7.16□□□□□ -1.26
LSC1YOR142W APL1P27351 700 aa7.16□□□□□ -1.26
LSC1YOR142W PEP7P32609 515 aa7.16□□□□□ -1.26
LSC1YOR142W SLA2P33338 968 aa7.16□□□□□ -1.26
LSC1YOR142W TBS1P38114 1094 aa7.16□□□□□ -1.26
LSC1YOR142W SIF2P38262 535 aa7.16□□□□□ -1.26
LSC1YOR142W SAH1P39954 449 aaKnown RBP7.16□□□□□ -1.26
LSC1YOR142W MMF1P40185 145 aaKnown RBP7.16□□□□□ -1.26
LSC1YOR142W FYV8P46949 817 aaKnown RBP7.16□□□□□ -1.26
LSC1YOR142W YML083CQ04526 418 aa7.16□□□□□ -1.26
LSC1YOR142W YLR297WQ05899 129 aa7.16□□□□□ -1.26
LSC1YOR142W CSR1Q06705 408 aaKnown RBP7.16□□□□□ -1.26
LSC1YOR142W GAL10P04397 699 aa7.15□□□□□ -1.26
LSC1YOR142W SNF1P06782 633 aaKnown RBP7.15□□□□□ -1.26
LSC1YOR142W RPS6AP0CX37 236 aaKnown RBP7.15□□□□□ -1.26
LSC1YOR142W RPS6BP0CX38 236 aaPredicted RBP7.15□□□□□ -1.26
LSC1YOR142W MAS1P10507 462 aa7.15□□□□□ -1.26
LSC1YOR142W RNR1P21524 888 aaKnown RBP7.15□□□□□ -1.26
LSC1YOR142W VPS3P23643 1011 aa7.15□□□□□ -1.26
LSC1YOR142W PGS1P25578 521 aa7.15□□□□□ -1.26
LSC1YOR142W RDH54P38086 958 aa7.15□□□□□ -1.26
LSC1YOR142W RKM3P38222 552 aa7.15□□□□□ -1.26
LSC1YOR142W EFM2P38347 419 aa7.15□□□□□ -1.26
LSC1YOR142W SAF1P38352 637 aa7.15□□□□□ -1.26
LSC1YOR142W MIP6P38760 659 aaKnown RBP7.15□□□□□ -1.26
LSC1YOR142W SMC3P47037 1230 aa7.15□□□□□ -1.26
LSC1YOR142W YJL045WP47052 634 aa7.15□□□□□ -1.26
LSC1YOR142W NOP13P53883 403 aaKnown RBP RIP-Chip data7.15□□□□□ -1.26not detected
LSC1YOR142W ADA2Q02336 434 aa7.15□□□□□ -1.26
LSC1YOR142W SDH5Q08230 162 aa7.15□□□□□ -1.26
LSC1YOR142W SGO1Q08490 590 aa7.15□□□□□ -1.26
LSC1YOR142W MNL2Q12205 849 aa7.15□□□□□ -1.26
LSC1YOR142W SPE1P08432 466 aa7.14□□□□□ -1.27
LSC1YOR142W COX11P19516 300 aaKnown RBP7.14□□□□□ -1.27
LSC1YOR142W DAL2P25335 343 aa7.14□□□□□ -1.27
LSC1YOR142W KNS1P32350 737 aaPredicted RBP7.14□□□□□ -1.27
LSC1YOR142W VPH1P32563 840 aaKnown RBP7.14□□□□□ -1.27
LSC1YOR142W YBR056WP38081 501 aa7.14□□□□□ -1.27
LSC1YOR142W CTM1P38818 585 aa7.14□□□□□ -1.27
LSC1YOR142W SPT8P38915 602 aa7.14□□□□□ -1.27
LSC1YOR142W COS5P47187 383 aa7.14□□□□□ -1.27
LSC1YOR142W HFM1P51979 1187 aa7.14□□□□□ -1.27
LSC1YOR142W SLG1P54867 378 aa7.14□□□□□ -1.27
LSC1YOR142W TIF35Q04067 274 aaKnown RBP7.14□□□□□ -1.27
LSC1YOR142W LEA1Q08963 238 aaPredicted RBP7.14□□□□□ -1.27
LSC1YOR142W ECM3Q99252 613 aa7.14□□□□□ -1.27
LSC1YOR142W APE1P14904 514 aa7.13□□□□□ -1.27
LSC1YOR142W KIP1P28742 1111 aa7.13□□□□□ -1.27
LSC1YOR142W SEC65P29478 273 aa7.13□□□□□ -1.27
LSC1YOR142W XRS2P33301 854 aa7.13□□□□□ -1.27
LSC1YOR142W PEX28P38848 579 aa7.13□□□□□ -1.27
LSC1YOR142W KAP123P40069 1113 aaKnown RBP7.13□□□□□ -1.27
LSC1YOR142W SBE2P42223 864 aaKnown RBP7.13□□□□□ -1.27
LSC1YOR142W TAD1P53065 400 aa7.13□□□□□ -1.27
LSC1YOR142W STE20Q03497 939 aaKnown RBP7.13□□□□□ -1.27
LSC1YOR142W HRT3Q12347 344 aa7.13□□□□□ -1.27
LSC1YOR142W AI5_BETAQ9ZZX0 354 aa7.13□□□□□ -1.27
LSC1YOR142W KEX2P13134 814 aa7.12□□□□□ -1.27
LSC1YOR142W TUP1P16649 713 aa7.12□□□□□ -1.27
LSC1YOR142W PDE1P22434 369 aa7.12□□□□□ -1.27
LSC1YOR142W SAT4P25333 603 aaKnown RBP7.12□□□□□ -1.27
LSC1YOR142W COQ8P27697 501 aa7.12□□□□□ -1.27
LSC1YOR142W EFB1P32471 206 aaKnown RBP7.12□□□□□ -1.27
LSC1YOR142W FRE1P32791 686 aa7.12□□□□□ -1.27
LSC1YOR142W MOB1P40484 314 aa7.12□□□□□ -1.27
LSC1YOR142W VNX1P42839 908 aa7.12□□□□□ -1.27
LSC1YOR142W VPS70P47161 811 aa7.12□□□□□ -1.27
LSC1YOR142W RSC1P53236 928 aa7.12□□□□□ -1.27
LSC1YOR142W EAF7P53911 425 aaKnown RBP7.12□□□□□ -1.27
LSC1YOR142W YNL011CP53980 444 aa7.12□□□□□ -1.27
LSC1YOR142W MUB1Q03162 620 aa7.12□□□□□ -1.27
LSC1YOR142W MSH3P25336 1018 aa7.11□□□□□ -1.27
LSC1YOR142W VBA3P25594 458 aa7.11□□□□□ -1.27
LSC1YOR142W GAC1P28006 793 aa7.11□□□□□ -1.27
LSC1YOR142W CSG2P35206 410 aa7.11□□□□□ -1.27
LSC1YOR142W VBA5P36172 582 aa7.11□□□□□ -1.27
Retrieved 100 of 5,963 RNA–protein pairs in 114.4 ms