RNA–Protein interactions for RNA: YNL232W

CSL4, Transcript of Exosome non-catalytic core component, yeast

Gene CSL4, Length 879 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CSL4	YNL232W	MUK1	Q02866	612 aa		6.71	□□□□□ -1.34
CSL4	YNL232W	RVB2	Q12464	471 aa	Known RBP	6.71	□□□□□ -1.34
CSL4	YNL232W	TY1A-LR4	P0C2I8	440 aa	Known RBP	6.7	□□□□□ -1.34
CSL4	YNL232W	TY1A-DR6	P0CX70	440 aa		6.7	□□□□□ -1.34
CSL4	YNL232W	TY1A-ER1	P0CX71	440 aa		6.7	□□□□□ -1.34
CSL4	YNL232W	TY1A-LR2	P0CX72	440 aa		6.7	□□□□□ -1.34
CSL4	YNL232W	TY1A-PL	P0CX73	440 aa		6.7	□□□□□ -1.34
CSL4	YNL232W	TY1A-JR1	P0CX74	440 aa		6.7	□□□□□ -1.34
CSL4	YNL232W	TY1A-LR3	P0CX75	440 aa		6.7	□□□□□ -1.34
CSL4	YNL232W	TY1A-ML2	P0CX76	440 aa		6.7	□□□□□ -1.34
CSL4	YNL232W	TVP38	P36164	337 aa		6.7	□□□□□ -1.34
CSL4	YNL232W	NUT1	P53114	1132 aa		6.7	□□□□□ -1.34
CSL4	YNL232W	MRPS35	P53292	345 aa		6.7	□□□□□ -1.34
CSL4	YNL232W	CDC55	Q00362	526 aa		6.7	□□□□□ -1.34
CSL4	YNL232W	TY1A-GR1	Q12085	440 aa		6.7	□□□□□ -1.34
CSL4	YNL232W	CLF1	Q12309	687 aa	Predicted RBP	6.7	□□□□□ -1.34
CSL4	YNL232W	TY1A-PR3	Q6Q5H1	440 aa	Known RBP	6.7	□□□□□ -1.34
CSL4	YNL232W	TY1A-OL	Q92392	440 aa	Known RBP	6.7	□□□□□ -1.34
CSL4	YNL232W	TRL1	P09880	827 aa	Known RBP	6.69	□□□□□ -1.34
CSL4	YNL232W	OPI1	P21957	404 aa		6.69	□□□□□ -1.34
CSL4	YNL232W	ADK2	P26364	225 aa		6.69	□□□□□ -1.34
CSL4	YNL232W	RME1	P32338	300 aa	Known RBP	6.69	□□□□□ -1.34
CSL4	YNL232W	HMF1	P40037	129 aa	Known RBP	6.69	□□□□□ -1.34
CSL4	YNL232W	GCV2	P49095	1034 aa		6.69	□□□□□ -1.34
CSL4	YNL232W	MYO5	Q04439	1219 aa	Known RBP	6.69	□□□□□ -1.34
CSL4	YNL232W	HCR1	Q05775	265 aa	Known RBP	6.69	□□□□□ -1.34
CSL4	YNL232W	VIP1	Q06685	1146 aa	Known RBP	6.69	□□□□□ -1.34
CSL4	YNL232W	GPI13	Q07830	1017 aa		6.69	□□□□□ -1.34
CSL4	YNL232W	CDC45	Q08032	650 aa		6.69	□□□□□ -1.34
CSL4	YNL232W	YVC1	Q12324	675 aa		6.69	□□□□□ -1.34
CSL4	YNL232W	UBC1	P21734	215 aa	Known RBP	6.68	□□□□□ -1.34
CSL4	YNL232W	PUP3	P25451	205 aa	Known RBP	6.68	□□□□□ -1.34
CSL4	YNL232W	CCC2	P38995	1004 aa		6.68	□□□□□ -1.34
CSL4	YNL232W	MOB1	P40484	314 aa		6.68	□□□□□ -1.34
CSL4	YNL232W	YGR045C	P53229	120 aa		6.68	□□□□□ -1.34
CSL4	YNL232W	ELA1	P53861	379 aa	Predicted RBP	6.68	□□□□□ -1.34
CSL4	YNL232W	MDM1	Q01846	1127 aa		6.68	□□□□□ -1.34
CSL4	YNL232W	SSY1	Q03770	852 aa		6.68	□□□□□ -1.34
CSL4	YNL232W	PMT7	Q06644	662 aa		6.68	□□□□□ -1.34
CSL4	YNL232W	LAA1	P39526	2014 aa		6.67	□□□□□ -1.34
CSL4	YNL232W	SNF1	P06782	633 aa	Known RBP	6.67	□□□□□ -1.34
CSL4	YNL232W	TSA1	P34760	196 aa	Known RBP	6.67	□□□□□ -1.34
CSL4	YNL232W	NMD2	P38798	1089 aa	Known RBP	6.67	□□□□□ -1.34
CSL4	YNL232W	PEX7	P39108	375 aa		6.67	□□□□□ -1.34
CSL4	YNL232W	YEL025C	P39991	1188 aa		6.67	□□□□□ -1.34
CSL4	YNL232W	CDA2	Q06703	312 aa		6.67	□□□□□ -1.34
CSL4	YNL232W	TRE1	Q08919	783 aa		6.67	□□□□□ -1.34
CSL4	YNL232W	RRD2	Q12461	358 aa		6.67	□□□□□ -1.34
CSL4	YNL232W	APE1	P14904	514 aa		6.66	□□□□□ -1.34
CSL4	YNL232W	RPL8A	P17076	256 aa	Known RBP	6.66	□□□□□ -1.34
CSL4	YNL232W	MAK31	P23059	88 aa		6.66	□□□□□ -1.34
CSL4	YNL232W	NFS1	P25374	497 aa		6.66	□□□□□ -1.34
CSL4	YNL232W	SEC20	P28791	383 aa		6.66	□□□□□ -1.34
CSL4	YNL232W	MCM5	P29496	775 aa	Known RBP	6.66	□□□□□ -1.34
CSL4	YNL232W	MMF1	P40185	145 aa	Known RBP	6.66	□□□□□ -1.34
CSL4	YNL232W	CSM2	P40465	213 aa		6.66	□□□□□ -1.34
CSL4	YNL232W	WHI4	Q07655	649 aa	Known RBP	6.66	□□□□□ -1.34
CSL4	YNL232W	DID4	P36108	232 aa		6.65	□□□□□ -1.34
CSL4	YNL232W	MRPL7	P36519	292 aa		6.65	□□□□□ -1.34
CSL4	YNL232W	PEX28	P38848	579 aa		6.65	□□□□□ -1.34
CSL4	YNL232W	YIR016W	P40572	265 aa		6.65	□□□□□ -1.34
CSL4	YNL232W	HUL5	P53119	910 aa		6.65	□□□□□ -1.34
CSL4	YNL232W	MON1	P53129	644 aa		6.65	□□□□□ -1.34
CSL4	YNL232W	MDR1	P53258	950 aa		6.65	□□□□□ -1.34
CSL4	YNL232W	MFB1	Q04922	465 aa		6.65	□□□□□ -1.34
CSL4	YNL232W	BRE1	Q07457	700 aa	Known RBP	6.65	□□□□□ -1.34
CSL4	YNL232W	ARP6	Q12509	438 aa		6.65	□□□□□ -1.34
CSL4	YNL232W	TRP2	P00899	507 aa	Known RBP	6.64	□□□□□ -1.35
CSL4	YNL232W	HCM1	P25364	564 aa		6.64	□□□□□ -1.35
CSL4	YNL232W	PWP2	P25635	923 aa	Known RBP	6.64	□□□□□ -1.35
CSL4	YNL232W	UBP11	P36026	717 aa		6.64	□□□□□ -1.35
CSL4	YNL232W	YHL026C	P38740	315 aa		6.64	□□□□□ -1.35
CSL4	YNL232W	TPM2	P40414	161 aa		6.64	□□□□□ -1.35
CSL4	YNL232W	MAF1	P41910	395 aa		6.64	□□□□□ -1.35
CSL4	YNL232W	AVO1	Q08236	1176 aa		6.64	□□□□□ -1.35
CSL4	YNL232W	DSE3	Q08729	430 aa		6.64	□□□□□ -1.35
CSL4	YNL232W	OXR1	Q08952	273 aa		6.64	□□□□□ -1.35
CSL4	YNL232W	LPX1	Q12405	387 aa	Known RBP	6.64	□□□□□ -1.35
CSL4	YNL232W	FRT1	Q99332	602 aa		6.64	□□□□□ -1.35
CSL4	YNL232W	SES1	P07284	462 aa	Known RBP	6.63	□□□□□ -1.35
CSL4	YNL232W	PEX1	P24004	1043 aa		6.63	□□□□□ -1.35
CSL4	YNL232W	SEC21	P32074	935 aa	Known RBP	6.63	□□□□□ -1.35
CSL4	YNL232W	PRO1	P32264	428 aa		6.63	□□□□□ -1.35
CSL4	YNL232W	GCS1	P35197	352 aa		6.63	□□□□□ -1.35
CSL4	YNL232W	ERP5	P38819	212 aa		6.63	□□□□□ -1.35
CSL4	YNL232W	ESL1	P40456	1118 aa		6.63	□□□□□ -1.35
CSL4	YNL232W	MDJ2	P42834	146 aa		6.63	□□□□□ -1.35
CSL4	YNL232W	ASE1	P50275	885 aa		6.63	□□□□□ -1.35
CSL4	YNL232W	YRB30	P53107	440 aa	Predicted RBP	6.63	□□□□□ -1.35
CSL4	YNL232W	ORC3	P54790	616 aa		6.63	□□□□□ -1.35
CSL4	YNL232W	YLR257W	Q06146	321 aa	Known RBP	6.63	□□□□□ -1.35
CSL4	YNL232W	SSF2	Q12153	453 aa	Predicted RBP	6.63	□□□□□ -1.35
CSL4	YNL232W	YCR015C	P25616	317 aa		6.62	□□□□□ -1.35
CSL4	YNL232W	BUD2	P33314	1104 aa		6.62	□□□□□ -1.35
CSL4	YNL232W	RER2	P35196	286 aa		6.62	□□□□□ -1.35
CSL4	YNL232W	ARL1	P38116	183 aa	Known RBP	6.62	□□□□□ -1.35
CSL4	YNL232W	SLS1	P42900	643 aa		6.62	□□□□□ -1.35
CSL4	YNL232W	SVF1	Q05515	481 aa		6.62	□□□□□ -1.35
CSL4	YNL232W	SPN1	Q06505	410 aa	Predicted RBP	6.62	□□□□□ -1.35
CSL4	YNL232W	PCD1	Q12524	340 aa		6.62	□□□□□ -1.35

Retrieved 100 of 5,963 RNA–protein pairs in 14.8 ms