RNA–Protein interactions for RNA: YNL186W

UBP10, Transcript of Ubiquitin-specific protease, deubiquitinates Ub-protein moieties, yeast

Gene UBP10, Length 2,379 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBP10	YNL186W	RIA1	P53893	1110 aa		4.69	□□□□□ -1.66
UBP10	YNL186W	HRQ1	Q05549	1077 aa		4.69	□□□□□ -1.66
UBP10	YNL186W	IRC3	Q06683	689 aa		4.69	□□□□□ -1.66
UBP10	YNL186W	RSC58	Q07979	502 aa		4.69	□□□□□ -1.66
UBP10	YNL186W	MDJ1	P35191	511 aa		4.68	□□□□□ -1.66
UBP10	YNL186W	NOP4	P37838	685 aa	Known RBP	4.68	□□□□□ -1.66
UBP10	YNL186W	TSL1	P38427	1098 aa	Known RBP	4.68	□□□□□ -1.66
UBP10	YNL186W	ENV11	P53246	860 aa		4.68	□□□□□ -1.66
UBP10	YNL186W	TEP1	P53916	434 aa		4.68	□□□□□ -1.66
UBP10	YNL186W	BLS1	Q06071	122 aa		4.68	□□□□□ -1.66
UBP10	YNL186W	YLR352W	Q06479	807 aa		4.68	□□□□□ -1.66
UBP10	YNL186W	SPN1	Q06505	410 aa	Predicted RBP	4.68	□□□□□ -1.66
UBP10	YNL186W	RLP24	Q07915	199 aa	Known RBP	4.68	□□□□□ -1.66
UBP10	YNL186W	ARG82	P07250	355 aa		4.68	□□□□□ -1.66
UBP10	YNL186W	DHR2	P36009	735 aa	Predicted RBP	4.68	□□□□□ -1.66
UBP10	YNL186W	PGM2	P37012	569 aa	Known RBP	4.68	□□□□□ -1.66
UBP10	YNL186W	MRPL16	P38064	232 aa		4.68	□□□□□ -1.66
UBP10	YNL186W	CCM1	P48237	864 aa	Predicted RBP	4.68	□□□□□ -1.66
UBP10	YNL186W	ARC35	P53731	342 aa	Known RBP	4.68	□□□□□ -1.66
UBP10	YNL186W	SRP1	Q02821	542 aa	Known RBP	4.68	□□□□□ -1.66
UBP10	YNL186W	ARA2	Q04212	335 aa		4.68	□□□□□ -1.66
UBP10	YNL186W	YMR018W	Q04364	514 aa		4.68	□□□□□ -1.66
UBP10	YNL186W	SPO21	Q12411	609 aa		4.68	□□□□□ -1.66
UBP10	YNL186W	RAV1	P47104	1357 aa		4.67	□□□□□ -1.66
UBP10	YNL186W	MET8	P15807	274 aa		4.67	□□□□□ -1.66
UBP10	YNL186W	AAC3	P18238	307 aa		4.67	□□□□□ -1.66
UBP10	YNL186W	MSC7	P38694	644 aa		4.67	□□□□□ -1.66
UBP10	YNL186W	MSB3	P48566	633 aa	Predicted RBP	4.67	□□□□□ -1.66
UBP10	YNL186W	SGD1	Q06132	899 aa		4.67	□□□□□ -1.66
UBP10	YNL186W	FKS3	Q04952	1785 aa		4.67	□□□□□ -1.66
UBP10	YNL186W	HSP82	P02829	709 aa	Known RBP	4.67	□□□□□ -1.66
UBP10	YNL186W	SPO16	P17122	198 aa		4.67	□□□□□ -1.66
UBP10	YNL186W	UGA3	P26370	528 aa		4.67	□□□□□ -1.66
UBP10	YNL186W	SLA2	P33338	968 aa		4.67	□□□□□ -1.66
UBP10	YNL186W	PES4	P39684	611 aa		4.67	□□□□□ -1.66
UBP10	YNL186W	SPC72	P39723	622 aa		4.67	□□□□□ -1.66
UBP10	YNL186W	NPP2	P39997	493 aa		4.67	□□□□□ -1.66
UBP10	YNL186W	NOP16	P40007	231 aa	Known RBP	4.67	□□□□□ -1.66
UBP10	YNL186W	CLA4	P48562	842 aa		4.67	□□□□□ -1.66
UBP10	YNL186W	MEC3	Q02574	474 aa		4.67	□□□□□ -1.66
UBP10	YNL186W	YHM2	Q04013	314 aa		4.67	□□□□□ -1.66
UBP10	YNL186W	TAF11	Q04226	346 aa		4.67	□□□□□ -1.66
UBP10	YNL186W	YDR514C	Q04408	483 aa		4.67	□□□□□ -1.66
UBP10	YNL186W	OMS1	Q06668	471 aa		4.67	□□□□□ -1.66
UBP10	YNL186W	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	4.67	□□□□□ -1.66	RIP-Chip
UBP10	YNL186W	SSM4	P40318	1319 aa		4.66	□□□□□ -1.66
UBP10	YNL186W	PSK1	P31374	1356 aa		4.66	□□□□□ -1.66
UBP10	YNL186W	SPS1	P08458	490 aa		4.66	□□□□□ -1.66
UBP10	YNL186W	PAH1	P32567	862 aa		4.66	□□□□□ -1.66
UBP10	YNL186W	VMA8	P32610	256 aa	Known RBP	4.66	□□□□□ -1.66
UBP10	YNL186W	YKL050C	P35736	922 aa		4.66	□□□□□ -1.66
UBP10	YNL186W	DOT6	P40059	670 aa	Known RBP	4.66	□□□□□ -1.66
UBP10	YNL186W	ASK10	P48361	1146 aa		4.66	□□□□□ -1.66
UBP10	YNL186W	UBP15	P50101	1230 aa		4.66	□□□□□ -1.66
UBP10	YNL186W	TDA9	Q04545	1251 aa		4.66	□□□□□ -1.66
UBP10	YNL186W	TFC6	Q06339	672 aa		4.66	□□□□□ -1.66
UBP10	YNL186W	RGA2	Q06407	1009 aa		4.66	□□□□□ -1.66
UBP10	YNL186W	DPH6	Q12429	685 aa		4.66	□□□□□ -1.66
UBP10	YNL186W	CTT1	P06115	562 aa		4.65	□□□□□ -1.66
UBP10	YNL186W	MSH1	P25846	959 aa		4.65	□□□□□ -1.66
UBP10	YNL186W	DPH1	P40487	425 aa	Known RBP	4.65	□□□□□ -1.66
UBP10	YNL186W	PUS4	P48567	403 aa	Known RBP	4.65	□□□□□ -1.66
UBP10	YNL186W	YKE2	P52553	114 aa		4.65	□□□□□ -1.66
UBP10	YNL186W	SCM3	Q12334	223 aa		4.65	□□□□□ -1.66
UBP10	YNL186W	MRP7	P12687	371 aa		4.65	□□□□□ -1.67
UBP10	YNL186W	HCA4	P20448	770 aa	Known RBP	4.65	□□□□□ -1.67
UBP10	YNL186W	RRT14	P40470	206 aa		4.65	□□□□□ -1.67
UBP10	YNL186W	PCL10	P53124	433 aa		4.65	□□□□□ -1.67
UBP10	YNL186W	PTA1	Q01329	785 aa	Predicted RBP	4.65	□□□□□ -1.67
UBP10	YNL186W	YPL260W	Q08977	551 aa		4.65	□□□□□ -1.67
UBP10	YNL186W	TPM1	P17536	199 aa	Known RBP	4.64	□□□□□ -1.67
UBP10	YNL186W	KIP1	P28742	1111 aa		4.64	□□□□□ -1.67
UBP10	YNL186W	SMY2	P32909	740 aa	Known RBP	4.64	□□□□□ -1.67
UBP10	YNL186W	HSL7	P38274	827 aa		4.64	□□□□□ -1.67
UBP10	YNL186W	YAR028W	P39548	234 aa		4.64	□□□□□ -1.67
UBP10	YNL186W	TPA1	P40032	644 aa	Known RBP	4.64	□□□□□ -1.67
UBP10	YNL186W	VPS53	P47061	822 aa		4.64	□□□□□ -1.67
UBP10	YNL186W	YGR016W	P53209	190 aa		4.64	□□□□□ -1.67
UBP10	YNL186W	YKU80	Q04437	629 aa		4.64	□□□□□ -1.67
UBP10	YNL186W	NUR1	Q12066	484 aa		4.64	□□□□□ -1.67
UBP10	YNL186W	DCS2	Q12123	353 aa		4.64	□□□□□ -1.67
UBP10	YNL186W	SNF1	P06782	633 aa	Known RBP	4.64	□□□□□ -1.67
UBP10	YNL186W	NCP1	P16603	691 aa	Known RBP	4.64	□□□□□ -1.67
UBP10	YNL186W	PRO1	P32264	428 aa		4.64	□□□□□ -1.67
UBP10	YNL186W	QNS1	P38795	714 aa	Known RBP	4.64	□□□□□ -1.67
UBP10	YNL186W	AXL2	P38928	823 aa		4.64	□□□□□ -1.67
UBP10	YNL186W	DUN1	P39009	513 aa		4.64	□□□□□ -1.67
UBP10	YNL186W	RAD26	P40352	1085 aa		4.64	□□□□□ -1.67
UBP10	YNL186W	RIC1	P40395	1056 aa		4.64	□□□□□ -1.67
UBP10	YNL186W	NEO1	P40527	1151 aa		4.64	□□□□□ -1.67
UBP10	YNL186W	YFL054C	P43549	646 aa		4.64	□□□□□ -1.67
UBP10	YNL186W	IRC6	P43615	237 aa		4.64	□□□□□ -1.67
UBP10	YNL186W	YJR098C	P47139	656 aa		4.64	□□□□□ -1.67
UBP10	YNL186W	GCV1	P48015	400 aa		4.64	□□□□□ -1.67
UBP10	YNL186W	NIT3	P49954	291 aa		4.64	□□□□□ -1.67
UBP10	YNL186W	TIM10	P87108	93 aa		4.64	□□□□□ -1.67
UBP10	YNL186W	YBR182C-A	Q8TGU6	64 aa		4.64	□□□□□ -1.67
UBP10	YNL186W	NAT1	P12945	854 aa	Known RBP	4.63	□□□□□ -1.67
UBP10	YNL186W	NFS1	P25374	497 aa		4.63	□□□□□ -1.67
UBP10	YNL186W	YCL002C	P25565	263 aa		4.63	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 12.5 ms