RNA–Protein interactions for RNA: YNL186W

UBP10, Transcript of Ubiquitin-specific protease, deubiquitinates Ub-protein moieties, yeastyeast

Gene UBP10, Length 2,379 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP10YNL186W DRS1P32892 752 aaKnown RBP9.56□□□□□ -0.88
UBP10YNL186W TFA1P36100 482 aa8.73□□□□□ -1.01
UBP10YNL186W MTC1P47018 478 aaKnown RBP8.71□□□□□ -1.01
UBP10YNL186W BFR2Q06631 534 aaKnown RBP8.62□□□□□ -1.03
UBP10YNL186W RQC2Q12532 1038 aaKnown RBP8.11□□□□□ -1.11
UBP10YNL186W AVT3P36062 692 aa8.06□□□□□ -1.12
UBP10YNL186W DIP2Q12220 943 aaPredicted RBP7.87□□□□□ -1.15
UBP10YNL186W TAF7Q05021 590 aa7.76□□□□□ -1.17
UBP10YNL186W MON2P48563 1636 aaPredicted RBP7.64□□□□□ -1.19
UBP10YNL186W DMA1P38823 416 aa7.51□□□□□ -1.21
UBP10YNL186W INO80P53115 1489 aa7.44□□□□□ -1.22
UBP10YNL186W LEO1P38439 464 aa7.27□□□□□ -1.24
UBP10YNL186W KOG1P38873 1557 aa7.2□□□□□ -1.26
UBP10YNL186W RSE1Q04693 1361 aaKnown RBP7.16□□□□□ -1.26
UBP10YNL186W PTP3P40048 928 aa7.06□□□□□ -1.28
UBP10YNL186W DNA2P38859 1522 aa7.03□□□□□ -1.28
UBP10YNL186W TCB3Q03640 1545 aaKnown RBP7.03□□□□□ -1.28
UBP10YNL186W SWR1Q05471 1514 aa7.01□□□□□ -1.29
UBP10YNL186W LEU3P08638 886 aa6.93□□□□□ -1.3
UBP10YNL186W TY1B-DR4Q07793 1604 aa6.9□□□□□ -1.3
UBP10YNL186W SAS10Q12136 610 aaPredicted RBP6.88□□□□□ -1.31
UBP10YNL186W RPL17AP05740 184 aaKnown RBP6.86□□□□□ -1.31
UBP10YNL186W RPL17BP46990 184 aaKnown RBP6.86□□□□□ -1.31
UBP10YNL186W SSP1P38871 571 aa6.84□□□□□ -1.31
UBP10YNL186W ISW2Q08773 1120 aa6.83□□□□□ -1.32
UBP10YNL186W RIM101P33400 625 aa6.82□□□□□ -1.32
UBP10YNL186W RPG1P38249 964 aaKnown RBP6.76□□□□□ -1.33
UBP10YNL186W SPT21P35209 758 aa6.75□□□□□ -1.33
UBP10YNL186W SPA2P23201 1466 aaKnown RBP6.75□□□□□ -1.33
UBP10YNL186W DMA2P53924 522 aa6.74□□□□□ -1.33
UBP10YNL186W ABP1P15891 592 aaKnown RBP6.72□□□□□ -1.33
UBP10YNL186W THO2P53552 1597 aaKnown RBP6.67□□□□□ -1.34
UBP10YNL186W REB1P21538 810 aa6.66□□□□□ -1.34
UBP10YNL186W OXP1P28273 1286 aa6.66□□□□□ -1.34
UBP10YNL186W RPN1P38764 993 aaKnown RBP6.64□□□□□ -1.35
UBP10YNL186W YLR271WQ06152 274 aa6.61□□□□□ -1.35
UBP10YNL186W YAH1Q12184 172 aaKnown RBP6.59□□□□□ -1.35
UBP10YNL186W ARP8Q12386 881 aaKnown RBP RIP-Chip data6.59□□□□□ -1.35not detected
UBP10YNL186W RLF2Q12495 606 aa6.57□□□□□ -1.36
UBP10YNL186W PRI1P10363 409 aa6.54□□□□□ -1.36
UBP10YNL186W MGA2P40578 1113 aa6.52□□□□□ -1.37
UBP10YNL186W SPT6P23615 1451 aaKnown RBP6.49□□□□□ -1.37
UBP10YNL186W BUD4P47136 1447 aa6.49□□□□□ -1.37
UBP10YNL186W IFH1P39520 1085 aa6.48□□□□□ -1.37
UBP10YNL186W CKB1P43639 278 aa6.48□□□□□ -1.37
UBP10YNL186W HSL1P34244 1518 aa6.48□□□□□ -1.37
UBP10YNL186W CST9Q06032 482 aa6.46□□□□□ -1.37
UBP10YNL186W REV3P14284 1504 aa6.46□□□□□ -1.37
UBP10YNL186W MIF2P35201 549 aa6.44□□□□□ -1.38
UBP10YNL186W YIL055CP40523 627 aaKnown RBP6.44□□□□□ -1.38
UBP10YNL186W PEP1P32319 1579 aa6.41□□□□□ -1.38
UBP10YNL186W MDS3P53094 1487 aa6.4□□□□□ -1.38
UBP10YNL186W SPB4P25808 606 aaPredicted RBP6.39□□□□□ -1.39
UBP10YNL186W RSM7P47150 247 aa6.38□□□□□ -1.39
UBP10YNL186W SGS1P35187 1447 aa6.37□□□□□ -1.39
UBP10YNL186W YPR148CQ06523 435 aa6.37□□□□□ -1.39
UBP10YNL186W SSK2P53599 1579 aa6.37□□□□□ -1.39
UBP10YNL186W ECM5Q03214 1411 aa6.37□□□□□ -1.39
UBP10YNL186W YKR023WP36119 530 aaKnown RBP6.35□□□□□ -1.39
UBP10YNL186W PSD2P53037 1138 aaKnown RBP6.34□□□□□ -1.39
UBP10YNL186W SET1P38827 1080 aaKnown RBP6.33□□□□□ -1.4
UBP10YNL186W VPS70P47161 811 aa6.33□□□□□ -1.4
UBP10YNL186W RAM2P29703 316 aa6.32□□□□□ -1.4
UBP10YNL186W BPT1P14772 1559 aa6.31□□□□□ -1.4
UBP10YNL186W HIR3P47171 1648 aa6.31□□□□□ -1.4
UBP10YNL186W KIN1P13185 1064 aa6.29□□□□□ -1.4
UBP10YNL186W DSF2P38213 736 aa6.29□□□□□ -1.4
UBP10YNL186W ORC1P54784 914 aaPredicted RBP6.28□□□□□ -1.4
UBP10YNL186W AAD16Q02895 342 aa6.26□□□□□ -1.41
UBP10YNL186W MET5P47169 1442 aa6.26□□□□□ -1.41
UBP10YNL186W LTE1P07866 1435 aa6.25□□□□□ -1.41
UBP10YNL186W MYO2P19524 1574 aaKnown RBP6.25□□□□□ -1.41
UBP10YNL186W YNR021WP53723 404 aaKnown RBP6.25□□□□□ -1.41
UBP10YNL186W YML020WQ03722 664 aa6.24□□□□□ -1.41
UBP10YNL186W TSR3Q12094 313 aaKnown RBP6.24□□□□□ -1.41
UBP10YNL186W NOP8Q08287 484 aaPredicted RBP6.23□□□□□ -1.41
UBP10YNL186W NAP1P25293 417 aaKnown RBP6.23□□□□□ -1.41
UBP10YNL186W AIM44Q99299 758 aa6.23□□□□□ -1.41
UBP10YNL186W AI2P03876 854 aa6.22□□□□□ -1.41
UBP10YNL186W YCF1P39109 1515 aaKnown RBP6.22□□□□□ -1.41
UBP10YNL186W PBS2P08018 668 aa6.22□□□□□ -1.41
UBP10YNL186W IOC4Q04213 475 aa6.21□□□□□ -1.42
UBP10YNL186W GLC3P32775 704 aa6.2□□□□□ -1.42
UBP10YNL186W AIM7Q12156 149 aa6.19□□□□□ -1.42
UBP10YNL186W TFC8Q12308 588 aa6.19□□□□□ -1.42
UBP10YNL186W RCR1P38212 213 aa6.18□□□□□ -1.42
UBP10YNL186W GUA1P38625 525 aaKnown RBP6.18□□□□□ -1.42
UBP10YNL186W HOP09932 586 aa6.18□□□□□ -1.42
UBP10YNL186W ATG2P53855 1592 aa6.18□□□□□ -1.42
UBP10YNL186W DNF1P32660 1571 aa6.16□□□□□ -1.42
UBP10YNL186W ESC1Q03661 1658 aaKnown RBP6.16□□□□□ -1.42
UBP10YNL186W SIN3P22579 1536 aa6.16□□□□□ -1.42
UBP10YNL186W HGH1P48362 394 aaKnown RBP6.16□□□□□ -1.42
UBP10YNL186W DCD1P06773 312 aa6.15□□□□□ -1.43
UBP10YNL186W SLX8P40072 274 aa6.14□□□□□ -1.43
UBP10YNL186W NUP42P49686 430 aaKnown RBP6.14□□□□□ -1.43
UBP10YNL186W DIT2P21595 489 aa6.13□□□□□ -1.43
UBP10YNL186W FAP1P53971 965 aa6.13□□□□□ -1.43
UBP10YNL186W MAK11P20484 414 aaKnown RBP6.11□□□□□ -1.43
UBP10YNL186W MAM3Q12296 706 aa6.11□□□□□ -1.43
Retrieved 100 of 5,963 RNA–protein pairs in 29 ms