RNA–Protein interactions for RNA: YNL024C-A

KSH1, Transcript of Essential protein suggested to function early in the secretory pathway, yeastyeast

Gene KSH1, Length 219 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
KSH1YNL024C-A SEC2P17065 759 aa6.95□□□□□ -1.3
KSH1YNL024C-A EFT1P32324 842 aaKnown RBP6.95□□□□□ -1.3
KSH1YNL024C-A MUD1P32605 298 aaKnown RBP6.95□□□□□ -1.3
KSH1YNL024C-A RGT1P32862 1170 aa6.95□□□□□ -1.3
KSH1YNL024C-A DBP7P36120 742 aaKnown RBP6.95□□□□□ -1.3
KSH1YNL024C-A SMF1P38925 575 aa6.95□□□□□ -1.3
KSH1YNL024C-A FIR1P40020 876 aa6.95□□□□□ -1.3
KSH1YNL024C-A MMM1P41800 426 aa6.95□□□□□ -1.3
KSH1YNL024C-A JJJ3P47138 172 aa6.95□□□□□ -1.3
KSH1YNL024C-A TAD1P53065 400 aa6.95□□□□□ -1.3
KSH1YNL024C-A RTT102P53330 157 aa6.95□□□□□ -1.3
KSH1YNL024C-A YVH1Q02256 364 aaKnown RBP6.95□□□□□ -1.3
KSH1YNL024C-A VTC3Q02725 835 aa6.95□□□□□ -1.3
KSH1YNL024C-A VTI1Q04338 217 aa6.95□□□□□ -1.3
KSH1YNL024C-A ECM7Q06200 448 aa6.95□□□□□ -1.3
KSH1YNL024C-A ATG23Q06671 453 aa6.95□□□□□ -1.3
KSH1YNL024C-A IES4Q08561 116 aa6.95□□□□□ -1.3
KSH1YNL024C-A HFI1Q12060 488 aa6.95□□□□□ -1.3
KSH1YNL024C-A RIO1Q12196 484 aaKnown RBP6.95□□□□□ -1.3
KSH1YNL024C-A SUT2Q12286 268 aa6.95□□□□□ -1.3
KSH1YNL024C-A HIF1Q12373 385 aa6.95□□□□□ -1.3
KSH1YNL024C-A GIS3Q12418 502 aa6.95□□□□□ -1.3
KSH1YNL024C-A RPS3P05750 240 aaKnown RBP6.94□□□□□ -1.3
KSH1YNL024C-A SCP160P06105 1222 aaKnown RBP RIP-Chip data6.94□□□□□ -1.3not detected
KSH1YNL024C-A SSD1P24276 1250 aaKnown RBP RIP-Chip data6.94□□□□□ -1.3not detected
KSH1YNL024C-A CDC48P25694 835 aaKnown RBP6.94□□□□□ -1.3
KSH1YNL024C-A GCG1P32656 232 aaKnown RBP6.94□□□□□ -1.3
KSH1YNL024C-A UIP5P36137 443 aa6.94□□□□□ -1.3
KSH1YNL024C-A RCK2P38623 610 aa6.94□□□□□ -1.3
KSH1YNL024C-A SET5P38890 526 aaKnown RBP6.94□□□□□ -1.3
KSH1YNL024C-A YMR124WP39523 943 aaKnown RBP6.94□□□□□ -1.3
KSH1YNL024C-A AFG3P39925 761 aa6.94□□□□□ -1.3
KSH1YNL024C-A FTR1P40088 404 aa6.94□□□□□ -1.3
KSH1YNL024C-A YJR107WP47145 328 aa6.94□□□□□ -1.3
KSH1YNL024C-A CWC22P53333 577 aaKnown RBP6.94□□□□□ -1.3
KSH1YNL024C-A RNT1Q02555 471 aa6.94□□□□□ -1.3
KSH1YNL024C-A SLD5Q03406 294 aa6.94□□□□□ -1.3
KSH1YNL024C-A DUS4Q06063 367 aa6.94□□□□□ -1.3
KSH1YNL024C-A NOC3Q07896 663 aaPredicted RBP6.94□□□□□ -1.3
KSH1YNL024C-A YDL206WQ12424 762 aa6.94□□□□□ -1.3
KSH1YNL024C-A TRM11Q12463 433 aa6.94□□□□□ -1.3
KSH1YNL024C-A RMP1Q12530 201 aa6.94□□□□□ -1.3
KSH1YNL024C-A DED1P06634 604 aaKnown RBP6.93□□□□□ -1.3
KSH1YNL024C-A CDC33P07260 213 aaKnown RBP6.93□□□□□ -1.3
KSH1YNL024C-A UBC6P33296 250 aaPredicted RBP6.93□□□□□ -1.3
KSH1YNL024C-A WHI3P34761 661 aaKnown RBP6.93□□□□□ -1.3
KSH1YNL024C-A MUD2P36084 527 aaKnown RBP6.93□□□□□ -1.3
KSH1YNL024C-A OLA1P38219 394 aaKnown RBP6.93□□□□□ -1.3
KSH1YNL024C-A AIM21P40563 679 aa6.93□□□□□ -1.3
KSH1YNL024C-A JJJ1P53863 590 aa6.93□□□□□ -1.3
KSH1YNL024C-A RPL22BP56628 122 aaKnown RBP6.93□□□□□ -1.3
KSH1YNL024C-A PUF3Q07807 879 aaKnown RBP RIP-Chip data6.93□□□□□ -1.3not detected
KSH1YNL024C-A MSC6Q08818 692 aaKnown RBP6.93□□□□□ -1.3
KSH1YNL024C-A MDM20Q12387 796 aaKnown RBP6.93□□□□□ -1.3
KSH1YNL024C-A GFA1P14742 717 aaKnown RBP6.92□□□□□ -1.3
KSH1YNL024C-A SWI3P32591 825 aa6.92□□□□□ -1.3
KSH1YNL024C-A GUA1P38625 525 aaKnown RBP6.92□□□□□ -1.3
KSH1YNL024C-A SAK1P38990 1142 aa6.92□□□□□ -1.3
KSH1YNL024C-A EAF5P39995 279 aa6.92□□□□□ -1.3
KSH1YNL024C-A PXA1P41909 870 aa6.92□□□□□ -1.3
KSH1YNL024C-A YFL040WP43562 540 aa6.92□□□□□ -1.3
KSH1YNL024C-A RPC17P47076 161 aa6.92□□□□□ -1.3
KSH1YNL024C-A YGL039WP53183 348 aaKnown RBP6.92□□□□□ -1.3
KSH1YNL024C-A CUL3P53202 744 aa6.92□□□□□ -1.3
KSH1YNL024C-A YNL146WP53906 100 aa6.92□□□□□ -1.3
KSH1YNL024C-A UBP3Q01477 912 aaKnown RBP RIP-Chip data6.92□□□□□ -1.3not detected
KSH1YNL024C-A FMP30Q02883 468 aa6.92□□□□□ -1.3
KSH1YNL024C-A YPL034WQ03083 165 aa6.92□□□□□ -1.3
KSH1YNL024C-A EAR1Q03212 550 aa6.92□□□□□ -1.3
KSH1YNL024C-A RRB1Q04225 511 aaKnown RBP6.92□□□□□ -1.3
KSH1YNL024C-A YMR114CQ04471 368 aaKnown RBP6.92□□□□□ -1.3
KSH1YNL024C-A SIL1Q08199 421 aa6.92□□□□□ -1.3
KSH1YNL024C-A YLL058WQ12198 575 aa6.92□□□□□ -1.3
KSH1YNL024C-A ZRT2Q12436 422 aa6.92□□□□□ -1.3
KSH1YNL024C-A QCR6P00127 147 aa6.91□□□□□ -1.3
KSH1YNL024C-A ERG11P10614 530 aa6.91□□□□□ -1.3
KSH1YNL024C-A COX11P19516 300 aaKnown RBP6.91□□□□□ -1.3
KSH1YNL024C-A AFT1P22149 690 aa6.91□□□□□ -1.3
KSH1YNL024C-A GCD11P32481 527 aaKnown RBP6.91□□□□□ -1.3
KSH1YNL024C-A SKG6P32900 734 aaPredicted RBP6.91□□□□□ -1.3
KSH1YNL024C-A PIN4P34217 668 aaKnown RBP RIP-Chip data6.91□□□□□ -1.3not detected
KSH1YNL024C-A PMC1P38929 1173 aaPredicted RBP6.91□□□□□ -1.3
KSH1YNL024C-A YTA12P40341 825 aa6.91□□□□□ -1.3
KSH1YNL024C-A SCD6P45978 349 aaKnown RBP RIP-Chip data6.91□□□□□ -1.3not detected
KSH1YNL024C-A CTR1P49573 406 aa6.91□□□□□ -1.3
KSH1YNL024C-A HSH155P49955 971 aaKnown RBP6.91□□□□□ -1.3
KSH1YNL024C-A ATG16Q03818 150 aa6.91□□□□□ -1.3
KSH1YNL024C-A UTP14Q04500 899 aaKnown RBP6.91□□□□□ -1.3
KSH1YNL024C-A YMR321CQ04898 105 aa6.91□□□□□ -1.3
KSH1YNL024C-A ECI1Q05871 280 aa6.91□□□□□ -1.3
KSH1YNL024C-A IWR1Q07532 353 aaPredicted RBP6.91□□□□□ -1.3
KSH1YNL024C-A GPI13Q07830 1017 aa6.91□□□□□ -1.3
KSH1YNL024C-A APL5Q08951 932 aaKnown RBP6.91□□□□□ -1.3
KSH1YNL024C-A SGT2Q12118 346 aaKnown RBP6.91□□□□□ -1.3
KSH1YNL024C-A YEL077CQ3E7X8 1277 aa6.91□□□□□ -1.3
KSH1YNL024C-A SNA3P14359 133 aa6.9□□□□□ -1.3
KSH1YNL024C-A IRE1P32361 1115 aa6.9□□□□□ -1.3
KSH1YNL024C-A BCS1P32839 456 aa6.9□□□□□ -1.3
KSH1YNL024C-A BUD2P33314 1104 aa6.9□□□□□ -1.3
KSH1YNL024C-A YKL050CP35736 922 aa6.9□□□□□ -1.3
Retrieved 100 of 5,963 RNA–protein pairs in 18 ms