RNA–Protein interactions for RNA: YMR288W

HSH155, Transcript of U2-snRNP associated splicing factor, yeastyeast

Gene HSH155, Length 2,916 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HSH155YMR288W ORC3P54790 616 aa2.35□□□□□ -2.03
HSH155YMR288W TAP42Q04372 366 aa2.35□□□□□ -2.03
HSH155YMR288W MDM38Q08179 573 aa2.35□□□□□ -2.03
HSH155YMR288W GRX4P32642 244 aa2.34□□□□□ -2.03
HSH155YMR288W PPG1P32838 368 aa2.34□□□□□ -2.03
HSH155YMR288W YBR284WP38150 797 aa2.34□□□□□ -2.03
HSH155YMR288W GIP4P39732 760 aa2.34□□□□□ -2.03
HSH155YMR288W GSM1P42950 618 aa2.34□□□□□ -2.03
HSH155YMR288W JSN1P47135 1091 aaKnown RBP RIP-Chip data2.34□□□□□ -2.03not detected
HSH155YMR288W MRPL22P53881 309 aa2.34□□□□□ -2.03
HSH155YMR288W LCD1Q04377 747 aa2.34□□□□□ -2.03
HSH155YMR288W HRQ1Q05549 1077 aa2.34□□□□□ -2.03
HSH155YMR288W YPR071WQ12346 211 aa2.34□□□□□ -2.03
HSH155YMR288W FLO11P08640 1367 aa2.34□□□□□ -2.03
HSH155YMR288W HSF1P10961 833 aa2.34□□□□□ -2.04
HSH155YMR288W CDC48P25694 835 aaKnown RBP2.34□□□□□ -2.04
HSH155YMR288W CDC12P32468 407 aaKnown RBP2.34□□□□□ -2.04
HSH155YMR288W BRN1P38170 754 aa2.34□□□□□ -2.04
HSH155YMR288W POA1P38218 177 aa2.34□□□□□ -2.04
HSH155YMR288W YKR078WP36158 585 aaKnown RBP2.33□□□□□ -2.04
HSH155YMR288W SPT20P50875 604 aa2.33□□□□□ -2.04
HSH155YMR288W PUS2P53167 370 aa2.33□□□□□ -2.04
HSH155YMR288W GTF1P53260 183 aaPredicted RBP2.33□□□□□ -2.04
HSH155YMR288W SRT1Q03175 343 aa2.33□□□□□ -2.04
HSH155YMR288W ROT1Q03691 256 aa2.33□□□□□ -2.04
HSH155YMR288W UBX2Q04228 584 aa2.33□□□□□ -2.04
HSH155YMR288W GAL10P04397 699 aa2.33□□□□□ -2.04
HSH155YMR288W SRP101P32916 621 aa2.33□□□□□ -2.04
HSH155YMR288W STE5P32917 917 aa2.33□□□□□ -2.04
HSH155YMR288W REC104P33323 182 aa2.33□□□□□ -2.04
HSH155YMR288W UIP5P36137 443 aa2.33□□□□□ -2.04
HSH155YMR288W RSP5P39940 809 aaKnown RBP2.33□□□□□ -2.04
HSH155YMR288W GYP7P48365 746 aa2.33□□□□□ -2.04
HSH155YMR288W HFM1P51979 1187 aa2.33□□□□□ -2.04
HSH155YMR288W BRE5P53741 515 aaKnown RBP2.33□□□□□ -2.04
HSH155YMR288W RXT3Q07458 294 aa2.33□□□□□ -2.04
HSH155YMR288W YLR125WQ12138 136 aa2.33□□□□□ -2.04
HSH155YMR288W LAM1P38851 1228 aa2.32□□□□□ -2.04
HSH155YMR288W VPS72Q03388 795 aa2.32□□□□□ -2.04
HSH155YMR288W MCM3P24279 971 aaKnown RBP2.32□□□□□ -2.04
HSH155YMR288W SAP190P36123 1033 aa2.32□□□□□ -2.04
HSH155YMR288W RIM8P53179 542 aa2.32□□□□□ -2.04
HSH155YMR288W CWC22P53333 577 aaKnown RBP2.32□□□□□ -2.04
HSH155YMR288W SUB1P54000 292 aaKnown RBP2.32□□□□□ -2.04
HSH155YMR288W ECM30Q06673 1274 aa2.32□□□□□ -2.04
HSH155YMR288W GSY1P23337 708 aa2.31□□□□□ -2.04
HSH155YMR288W MNN4P36044 1178 aa2.31□□□□□ -2.04
HSH155YMR288W PBP2P38151 413 aaKnown RBP RIP-Chip data2.31□□□□□ -2.04not detected
HSH155YMR288W YAP1801P38856 637 aa2.31□□□□□ -2.04
HSH155YMR288W SIT1P39980 628 aa2.31□□□□□ -2.04
HSH155YMR288W RPS0BP46654 252 aaKnown RBP2.31□□□□□ -2.04
HSH155YMR288W YJR008WP47085 338 aa2.31□□□□□ -2.04
HSH155YMR288W YGR012WP53206 393 aa2.31□□□□□ -2.04
HSH155YMR288W DAM1P53267 343 aa2.31□□□□□ -2.04
HSH155YMR288W POB3Q04636 552 aaKnown RBP2.31□□□□□ -2.04
HSH155YMR288W GPB1Q08886 897 aa2.31□□□□□ -2.04
HSH155YMR288W HBN1Q96VH4 193 aa2.31□□□□□ -2.04
HSH155YMR288W ADR1P07248 1323 aa2.31□□□□□ -2.04
HSH155YMR288W PHR1P05066 565 aaKnown RBP RIP-Chip data2.31□□□□□ -2.04not detected
HSH155YMR288W NOT3P06102 836 aaKnown RBP2.31□□□□□ -2.04
HSH155YMR288W PHO8P11491 566 aa2.31□□□□□ -2.04
HSH155YMR288W THI4P32318 326 aa2.31□□□□□ -2.04
HSH155YMR288W PET10P36139 283 aa2.31□□□□□ -2.04
HSH155YMR288W GIC1P38785 314 aa2.31□□□□□ -2.04
HSH155YMR288W NUP82P40368 713 aa2.31□□□□□ -2.04
HSH155YMR288W IOC3P43596 787 aa2.31□□□□□ -2.04
HSH155YMR288W PFD1P46988 109 aa2.31□□□□□ -2.04
HSH155YMR288W RAI1P53063 387 aaKnown RBP2.31□□□□□ -2.04
HSH155YMR288W RTS3P53289 263 aa2.31□□□□□ -2.04
HSH155YMR288W NPL3Q01560 414 aaKnown RBP RIP-Chip data2.31□□□□□ -2.04not detected
HSH155YMR288W MSC2Q03455 724 aa2.31□□□□□ -2.04
HSH155YMR288W YDR514CQ04408 483 aa2.31□□□□□ -2.04
HSH155YMR288W RLP24Q07915 199 aaKnown RBP2.31□□□□□ -2.04
HSH155YMR288W XYL2Q07993 356 aa2.31□□□□□ -2.04
HSH155YMR288W MET6P05694 767 aaKnown RBP2.31□□□□□ -2.04
HSH155YMR288W RPS13P05756 151 aaKnown RBP2.31□□□□□ -2.04
HSH155YMR288W MPH2P0CD99 609 aa2.31□□□□□ -2.04
HSH155YMR288W ATG19P35193 415 aa2.31□□□□□ -2.04
HSH155YMR288W ECM21P38167 1117 aaKnown RBP2.31□□□□□ -2.04
HSH155YMR288W AIM3P38266 947 aaKnown RBP2.31□□□□□ -2.04
HSH155YMR288W AFG3P39925 761 aa2.31□□□□□ -2.04
HSH155YMR288W TOK1P40310 691 aa2.31□□□□□ -2.04
HSH155YMR288W YFL040WP43562 540 aa2.31□□□□□ -2.04
HSH155YMR288W SFB2P53953 876 aa2.31□□□□□ -2.04
HSH155YMR288W SIZ1Q04195 904 aa2.31□□□□□ -2.04
HSH155YMR288W REH1Q06709 432 aa2.31□□□□□ -2.04
HSH155YMR288W RPL40AP0CH08 128 aaKnown RBP2.3□□□□□ -2.04
HSH155YMR288W RPL40BP0CH09 128 aaKnown RBP2.3□□□□□ -2.04
HSH155YMR288W MSD1P15179 658 aaKnown RBP2.3□□□□□ -2.04
HSH155YMR288W HBS1P32769 611 aaKnown RBP2.3□□□□□ -2.04
HSH155YMR288W MEF2P39677 819 aa2.3□□□□□ -2.04
HSH155YMR288W CEP3P40969 608 aa2.3□□□□□ -2.04
HSH155YMR288W ALG2P43636 503 aa2.3□□□□□ -2.04
HSH155YMR288W UBP16Q02863 499 aa2.3□□□□□ -2.04
HSH155YMR288W FMP30Q02883 468 aa2.3□□□□□ -2.04
HSH155YMR288W GCN5Q03330 439 aa2.3□□□□□ -2.04
HSH155YMR288W RPN4Q03465 531 aa2.3□□□□□ -2.04
HSH155YMR288W DAP1Q12091 152 aa2.3□□□□□ -2.04
HSH155YMR288W ECM29P38737 1868 aa2.3□□□□□ -2.04
HSH155YMR288W YKL151CP36059 337 aa2.3□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 11.2 ms