RNA–Protein interactions for RNA: YMR185W

RTP1, Transcript of Protein required for the nuclear import and biogenesis of RNA pol II, yeastyeast

Gene RTP1, Length 2,946 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTP1YMR185W MRX1P40050 688 aa1.96□□□□□ -2.1
RTP1YMR185W PCI8P40512 444 aa1.96□□□□□ -2.1
RTP1YMR185W EEB1Q02891 456 aa1.96□□□□□ -2.1
RTP1YMR185W VMS1Q04311 632 aaKnown RBP1.96□□□□□ -2.1
RTP1YMR185W MYO5Q04439 1219 aaKnown RBP1.96□□□□□ -2.1
RTP1YMR185W YDR338CQ05497 695 aa1.96□□□□□ -2.1
RTP1YMR185W TOS4Q06266 489 aa1.96□□□□□ -2.1
RTP1YMR185W TFC6Q06339 672 aa1.96□□□□□ -2.1
RTP1YMR185W TAF10Q12030 206 aa1.96□□□□□ -2.1
RTP1YMR185W HAT1Q12341 374 aa1.96□□□□□ -2.1
RTP1YMR185W NBL1Q3E7Y6 73 aa1.96□□□□□ -2.1
RTP1YMR185W HIS4P00815 799 aaKnown RBP1.95□□□□□ -2.1
RTP1YMR185W TOP1P04786 769 aa1.95□□□□□ -2.1
RTP1YMR185W PYC1P11154 1178 aaKnown RBP1.95□□□□□ -2.1
RTP1YMR185W CKA2P19454 339 aa1.95□□□□□ -2.1
RTP1YMR185W PRE10P21242 288 aaKnown RBP RIP-Chip data1.95□□□□□ -2.1not detected
RTP1YMR185W VPS1P21576 704 aaKnown RBP1.95□□□□□ -2.1
RTP1YMR185W DAL7P21826 554 aa1.95□□□□□ -2.1
RTP1YMR185W SEC14P24280 304 aaKnown RBP1.95□□□□□ -2.1
RTP1YMR185W YCR051WP25631 222 aa1.95□□□□□ -2.1
RTP1YMR185W MCM5P29496 775 aaKnown RBP1.95□□□□□ -2.1
RTP1YMR185W PDB1P32473 366 aaKnown RBP1.95□□□□□ -2.1
RTP1YMR185W LOS1P33418 1100 aaPredicted RBP1.95□□□□□ -2.1
RTP1YMR185W KTR2P33550 425 aa1.95□□□□□ -2.1
RTP1YMR185W YKL077WP36081 392 aa1.95□□□□□ -2.1
RTP1YMR185W LAS1P36146 502 aaPredicted RBP1.95□□□□□ -2.1
RTP1YMR185W SPP381P38282 291 aaPredicted RBP1.95□□□□□ -2.1
RTP1YMR185W RCK2P38623 610 aa1.95□□□□□ -2.1
RTP1YMR185W SMC2P38989 1170 aaKnown RBP1.95□□□□□ -2.1
RTP1YMR185W SDS3P40505 327 aa1.95□□□□□ -2.1
RTP1YMR185W OYE3P41816 400 aaPredicted RBP1.95□□□□□ -2.1
RTP1YMR185W GPD2P41911 440 aaKnown RBP1.95□□□□□ -2.1
RTP1YMR185W UBP3Q01477 912 aaKnown RBP RIP-Chip data1.95□□□□□ -2.1 RIP-Chip
RTP1YMR185W FCP1Q03254 732 aa1.95□□□□□ -2.1
RTP1YMR185W PKH1Q03407 766 aa1.95□□□□□ -2.1
RTP1YMR185W ECI1Q05871 280 aa1.95□□□□□ -2.1
RTP1YMR185W YLR287CQ05881 355 aa1.95□□□□□ -2.1
RTP1YMR185W CLF1Q12309 687 aaPredicted RBP1.95□□□□□ -2.1
RTP1YMR185W SMC6Q12749 1114 aa1.95□□□□□ -2.1
RTP1YMR185W RAD1P06777 1100 aa1.95□□□□□ -2.1
RTP1YMR185W TOM70P07213 617 aaKnown RBP1.95□□□□□ -2.1
RTP1YMR185W HTS1P07263 546 aaKnown RBP1.95□□□□□ -2.1
RTP1YMR185W NPR1P22211 790 aa1.95□□□□□ -2.1
RTP1YMR185W MAK31P23059 88 aa1.95□□□□□ -2.1
RTP1YMR185W SMY1P32364 656 aaKnown RBP1.95□□□□□ -2.1
RTP1YMR185W SAC6P32599 642 aaKnown RBP1.95□□□□□ -2.1
RTP1YMR185W ANP1P32629 500 aa1.95□□□□□ -2.1
RTP1YMR185W NIP100P33420 868 aa1.95□□□□□ -2.1
RTP1YMR185W YKL133CP36066 463 aa1.95□□□□□ -2.1
RTP1YMR185W SET3P36124 751 aa1.95□□□□□ -2.1
RTP1YMR185W GRX7P38068 203 aa1.95□□□□□ -2.1
RTP1YMR185W GRS1P38088 690 aaKnown RBP1.95□□□□□ -2.1
RTP1YMR185W ETP1P38748 585 aaKnown RBP1.95□□□□□ -2.1
RTP1YMR185W TOM71P38825 639 aaKnown RBP1.95□□□□□ -2.1
RTP1YMR185W RTS1P38903 757 aa1.95□□□□□ -2.1
RTP1YMR185W CCT3P39077 534 aaKnown RBP1.95□□□□□ -2.1
RTP1YMR185W YMR147WP40218 223 aaKnown RBP1.95□□□□□ -2.1
RTP1YMR185W LYS14P40971 790 aa1.95□□□□□ -2.1
RTP1YMR185W MDJ2P42834 146 aa1.95□□□□□ -2.1
RTP1YMR185W SGM1P47166 707 aa1.95□□□□□ -2.1
RTP1YMR185W YGR153WP48238 217 aa1.95□□□□□ -2.1
RTP1YMR185W RET3P53600 189 aa1.95□□□□□ -2.1
RTP1YMR185W RPT6Q01939 405 aaKnown RBP1.95□□□□□ -2.1
RTP1YMR185W VPS16Q03308 798 aa1.95□□□□□ -2.1
RTP1YMR185W SPC24Q04477 213 aa1.95□□□□□ -2.1
RTP1YMR185W SPP382Q06411 708 aaPredicted RBP1.95□□□□□ -2.1
RTP1YMR185W TSR1Q07381 788 aaKnown RBP1.95□□□□□ -2.1
RTP1YMR185W CMS1Q07897 291 aaKnown RBP1.95□□□□□ -2.1
RTP1YMR185W MLH2Q07980 695 aa1.95□□□□□ -2.1
RTP1YMR185W GPN2Q08726 347 aaPredicted RBP1.95□□□□□ -2.1
RTP1YMR185W YIG1Q08956 461 aa1.95□□□□□ -2.1
RTP1YMR185W RRI2Q12348 645 aa1.95□□□□□ -2.1
RTP1YMR185W YOL098CQ12496 1037 aa1.95□□□□□ -2.1
RTP1YMR185W FLO1P32768 1537 aa1.95□□□□□ -2.1
RTP1YMR185W MET6P05694 767 aaKnown RBP1.94□□□□□ -2.1
RTP1YMR185W ADH4P10127 382 aa1.94□□□□□ -2.1
RTP1YMR185W KRS1P15180 591 aaKnown RBP1.94□□□□□ -2.1
RTP1YMR185W KAR3P17119 729 aa1.94□□□□□ -2.1
RTP1YMR185W HCA4P20448 770 aaKnown RBP1.94□□□□□ -2.1
RTP1YMR185W RAD53P22216 821 aa1.94□□□□□ -2.1
RTP1YMR185W RRP43P25359 394 aaPredicted RBP1.94□□□□□ -2.1
RTP1YMR185W PAP1P29468 568 aaKnown RBP1.94□□□□□ -2.1
RTP1YMR185W CDC11P32458 415 aa1.94□□□□□ -2.1
RTP1YMR185W SEC8P32855 1065 aa1.94□□□□□ -2.1
RTP1YMR185W OLA1P38219 394 aaKnown RBP1.94□□□□□ -2.1
RTP1YMR185W AIM3P38266 947 aaKnown RBP1.94□□□□□ -2.1
RTP1YMR185W LIN1P38852 340 aaPredicted RBP1.94□□□□□ -2.1
RTP1YMR185W NMD3P38861 518 aaKnown RBP1.94□□□□□ -2.1
RTP1YMR185W SIP5P40210 489 aaKnown RBP1.94□□□□□ -2.1
RTP1YMR185W MDR1P53258 950 aa1.94□□□□□ -2.1
RTP1YMR185W PXR1P53335 271 aaPredicted RBP1.94□□□□□ -2.1
RTP1YMR185W SEC5P89102 971 aa1.94□□□□□ -2.1
RTP1YMR185W TDA5Q06417 326 aaKnown RBP1.94□□□□□ -2.1
RTP1YMR185W DIB1Q06819 143 aaPredicted RBP1.94□□□□□ -2.1
RTP1YMR185W YAP7Q08182 245 aa1.94□□□□□ -2.1
RTP1YMR185W SIL1Q08199 421 aa1.94□□□□□ -2.1
RTP1YMR185W PSF3Q12146 194 aa1.94□□□□□ -2.1
RTP1YMR185W RRP6Q12149 733 aaKnown RBP1.94□□□□□ -2.1
RTP1YMR185W NCA2Q12374 616 aa1.94□□□□□ -2.1
RTP1YMR185W YMR085WP0CF18 432 aa1.94□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 103.3 ms