RNA–Protein interactions for RNA: YLR435W

TSR2, Transcript of Protein with a potential role in pre-rRNA processing, yeast

Gene TSR2, Length 618 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TSR2	YLR435W	HMLALPHA2	P0CY09	210 aa		7.41	□□□□□ -1.22
TSR2	YLR435W	POX1	P13711	748 aa		7.41	□□□□□ -1.22
TSR2	YLR435W	GAS1	P22146	559 aa	Known RBP	7.41	□□□□□ -1.22
TSR2	YLR435W	SEC20	P28791	383 aa		7.41	□□□□□ -1.22
TSR2	YLR435W	PRO1	P32264	428 aa		7.41	□□□□□ -1.22
TSR2	YLR435W	FLR1	P38124	548 aa		7.41	□□□□□ -1.22
TSR2	YLR435W	YAR028W	P39548	234 aa		7.41	□□□□□ -1.22
TSR2	YLR435W	NOC2	P39744	710 aa	Known RBP	7.41	□□□□□ -1.22
TSR2	YLR435W	VPS53	P47061	822 aa		7.41	□□□□□ -1.22
TSR2	YLR435W	CTF18	P49956	741 aa		7.41	□□□□□ -1.22
TSR2	YLR435W	ORC3	P54790	616 aa		7.41	□□□□□ -1.22
TSR2	YLR435W	ISA1	Q07821	250 aa	Predicted RBP	7.41	□□□□□ -1.22
TSR2	YLR435W	PUS7	Q08647	676 aa	Known RBP	7.41	□□□□□ -1.22
TSR2	YLR435W	VPS1	P21576	704 aa	Known RBP	7.4	□□□□□ -1.22
TSR2	YLR435W	VPS35	P34110	944 aa		7.4	□□□□□ -1.22
TSR2	YLR435W	BMH2	P34730	273 aa	Known RBP	7.4	□□□□□ -1.22
TSR2	YLR435W	RPS7B	P48164	190 aa	Known RBP	7.4	□□□□□ -1.22
TSR2	YLR435W	PTA1	Q01329	785 aa	Predicted RBP	7.4	□□□□□ -1.22
TSR2	YLR435W	UBR2	Q07963	1872 aa		7.39	□□□□□ -1.23
TSR2	YLR435W	MAS2	P11914	482 aa		7.39	□□□□□ -1.23
TSR2	YLR435W	DAK1	P54838	584 aa	Known RBP	7.39	□□□□□ -1.23
TSR2	YLR435W	GDE1	Q02979	1223 aa		7.39	□□□□□ -1.23
TSR2	YLR435W	TPP1	Q03796	238 aa		7.39	□□□□□ -1.23
TSR2	YLR435W	AIM33	Q04516	312 aa		7.39	□□□□□ -1.23
TSR2	YLR435W	ARP6	Q12509	438 aa		7.39	□□□□□ -1.23
TSR2	YLR435W	PHO4	P07270	312 aa	Known RBP	7.38	□□□□□ -1.23
TSR2	YLR435W	SES1	P07284	462 aa	Known RBP	7.38	□□□□□ -1.23
TSR2	YLR435W	CDC6	P09119	513 aa		7.38	□□□□□ -1.23
TSR2	YLR435W	MSH3	P25336	1018 aa		7.38	□□□□□ -1.23
TSR2	YLR435W	SEC8	P32855	1065 aa		7.38	□□□□□ -1.23
TSR2	YLR435W	UBP11	P36026	717 aa		7.38	□□□□□ -1.23
TSR2	YLR435W	PPX1	P38698	397 aa		7.38	□□□□□ -1.23
TSR2	YLR435W	CCT3	P39077	534 aa	Known RBP	7.38	□□□□□ -1.23
TSR2	YLR435W	RSM26	P47141	266 aa		7.38	□□□□□ -1.23
TSR2	YLR435W	YGL138C	P53122	345 aa		7.38	□□□□□ -1.23
TSR2	YLR435W	BNI5	P53890	448 aa	Known RBP	7.38	□□□□□ -1.23
TSR2	YLR435W	VPS72	Q03388	795 aa		7.38	□□□□□ -1.23
TSR2	YLR435W	YLR407W	Q06070	228 aa		7.38	□□□□□ -1.23
TSR2	YLR435W	WHI4	Q07655	649 aa	Known RBP	7.38	□□□□□ -1.23
TSR2	YLR435W	LPX1	Q12405	387 aa	Known RBP	7.38	□□□□□ -1.23
TSR2	YLR435W	TY1B-A	O13527	1196 aa	Known RBP	7.37	□□□□□ -1.23
TSR2	YLR435W	HSP82	P02829	709 aa	Known RBP	7.37	□□□□□ -1.23
TSR2	YLR435W	SQT1	P35184	431 aa		7.37	□□□□□ -1.23
TSR2	YLR435W	HSE1	P38753	452 aa		7.37	□□□□□ -1.23
TSR2	YLR435W	PTC7	P38797	343 aa		7.37	□□□□□ -1.23
TSR2	YLR435W	AIM21	P40563	679 aa		7.37	□□□□□ -1.23
TSR2	YLR435W	BUD6	P41697	788 aa		7.37	□□□□□ -1.23
TSR2	YLR435W	ORC4	P54791	529 aa		7.37	□□□□□ -1.23
TSR2	YLR435W	PEX13	P80667	386 aa		7.37	□□□□□ -1.23
TSR2	YLR435W	UTP5	Q04177	643 aa	Known RBP	7.37	□□□□□ -1.23
TSR2	YLR435W	DAL4	Q04895	635 aa		7.37	□□□□□ -1.23
TSR2	YLR435W	SVF1	Q05515	481 aa		7.37	□□□□□ -1.23
TSR2	YLR435W	ECM30	Q06673	1274 aa		7.37	□□□□□ -1.23
TSR2	YLR435W	YLL058W	Q12198	575 aa		7.37	□□□□□ -1.23
TSR2	YLR435W	YPR117W	Q06116	2489 aa		7.37	□□□□□ -1.23
TSR2	YLR435W	ILV1	P00927	576 aa	Known RBP	7.36	□□□□□ -1.23
TSR2	YLR435W	SAS3	P34218	831 aa		7.36	□□□□□ -1.23
TSR2	YLR435W	ATG14	P38270	344 aa		7.36	□□□□□ -1.23
TSR2	YLR435W	OPY1	P38271	328 aa		7.36	□□□□□ -1.23
TSR2	YLR435W	VPS20	Q04272	221 aa		7.36	□□□□□ -1.23
TSR2	YLR435W	YLR257W	Q06146	321 aa	Known RBP	7.36	□□□□□ -1.23
TSR2	YLR435W	RTP1	Q12751	981 aa		7.36	□□□□□ -1.23
TSR2	YLR435W	RPL19A	P0CX82	189 aa	Known RBP	7.35	□□□□□ -1.23
TSR2	YLR435W	RPL19B	P0CX83	189 aa	Predicted RBP	7.35	□□□□□ -1.23
TSR2	YLR435W	VMA4	P22203	233 aa	Known RBP	7.35	□□□□□ -1.23
TSR2	YLR435W	YHL017W	P38745	532 aa		7.35	□□□□□ -1.23
TSR2	YLR435W	GAA1	P39012	614 aa		7.35	□□□□□ -1.23
TSR2	YLR435W	GTS1	P40956	396 aa		7.35	□□□□□ -1.23
TSR2	YLR435W	HUL5	P53119	910 aa		7.35	□□□□□ -1.23
TSR2	YLR435W	OYE2	Q03558	400 aa	Known RBP	7.35	□□□□□ -1.23
TSR2	YLR435W	CDA2	Q06703	312 aa		7.35	□□□□□ -1.23
TSR2	YLR435W	YDR524C-B	Q3E6R4	66 aa		7.35	□□□□□ -1.23
TSR2	YLR435W	RIF1	P29539	1916 aa		7.35	□□□□□ -1.23
TSR2	YLR435W	CPA2	P03965	1118 aa	Known RBP	7.34	□□□□□ -1.23
TSR2	YLR435W	HIP1	P06775	603 aa		7.34	□□□□□ -1.23
TSR2	YLR435W	GSY1	P23337	708 aa		7.34	□□□□□ -1.23
TSR2	YLR435W	CDC48	P25694	835 aa	Known RBP	7.34	□□□□□ -1.23
TSR2	YLR435W	MET4	P32389	672 aa		7.34	□□□□□ -1.23
TSR2	YLR435W	TSA1	P34760	196 aa	Known RBP	7.34	□□□□□ -1.23
TSR2	YLR435W	RFC5	P38251	354 aa		7.34	□□□□□ -1.23
TSR2	YLR435W	NPA3	P47122	385 aa		7.34	□□□□□ -1.23
TSR2	YLR435W	DIP5	P53388	608 aa		7.34	□□□□□ -1.23
TSR2	YLR435W	CSM3	Q04659	317 aa		7.34	□□□□□ -1.23
TSR2	YLR435W	RSA3	Q05942	220 aa	Known RBP	7.34	□□□□□ -1.23
TSR2	YLR435W	CRD1	Q07560	283 aa		7.34	□□□□□ -1.23
TSR2	YLR435W	HRK1	Q08732	759 aa	Known RBP	7.34	□□□□□ -1.23
TSR2	YLR435W	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	7.33	□□□□□ -1.24	not detected
TSR2	YLR435W	THR4	P16120	514 aa	Known RBP	7.33	□□□□□ -1.24
TSR2	YLR435W	CBP3	P21560	335 aa		7.33	□□□□□ -1.24
TSR2	YLR435W	SAD1	P43589	448 aa		7.33	□□□□□ -1.24
TSR2	YLR435W	YGL081W	P53156	320 aa		7.33	□□□□□ -1.24
TSR2	YLR435W	MSC2	Q03455	724 aa		7.33	□□□□□ -1.24
TSR2	YLR435W	DCS2	Q12123	353 aa		7.33	□□□□□ -1.24
TSR2	YLR435W	GET3	Q12154	354 aa	Known RBP	7.33	□□□□□ -1.24
TSR2	YLR435W	ATG11	Q12527	1178 aa		7.33	□□□□□ -1.24
TSR2	YLR435W	TUF1	P02992	437 aa	Known RBP	7.32	□□□□□ -1.24
TSR2	YLR435W	SRO9	P25567	434 aa	Known RBP	7.32	□□□□□ -1.24
TSR2	YLR435W	TIM23	P32897	222 aa		7.32	□□□□□ -1.24
TSR2	YLR435W	YHL012W	P38709	493 aa		7.32	□□□□□ -1.24
TSR2	YLR435W	PEX28	P38848	579 aa		7.32	□□□□□ -1.24

Retrieved 100 of 5,963 RNA–protein pairs in 25.7 ms