RNA–Protein interactions for RNA: YLR276C

DBP9, Transcript of DEAD-box protein required for 27S rRNA processing, yeast

Gene DBP9, Length 1,785 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DBP9	YLR276C	SFL1	P20134	766 aa		6.12	□□□□□ -1.43
DBP9	YLR276C	SPC29	P33419	253 aa		6.12	□□□□□ -1.43
DBP9	YLR276C	YSW1	P38280	609 aa		6.12	□□□□□ -1.43
DBP9	YLR276C	SHC1	P39000	512 aa		6.12	□□□□□ -1.43
DBP9	YLR276C	VPS53	P47061	822 aa		6.12	□□□□□ -1.43
DBP9	YLR276C	CLA4	P48562	842 aa		6.12	□□□□□ -1.43
DBP9	YLR276C	HNT2	P49775	206 aa		6.12	□□□□□ -1.43
DBP9	YLR276C	YGL242C	P53066	181 aa		6.12	□□□□□ -1.43
DBP9	YLR276C	RKM2	Q03942	479 aa		6.12	□□□□□ -1.43
DBP9	YLR276C	RSC2	Q06488	889 aa		6.12	□□□□□ -1.43
DBP9	YLR276C	CHC1	P22137	1653 aa	Known RBP	6.12	□□□□□ -1.43
DBP9	YLR276C	SPO14	P36126	1683 aa		6.12	□□□□□ -1.43
DBP9	YLR276C	PHR1	P05066	565 aa	Known RBP RIP-Chip data	6.11	□□□□□ -1.43	not detected
DBP9	YLR276C	UBC1	P21734	215 aa	Known RBP	6.11	□□□□□ -1.43
DBP9	YLR276C	CLB4	P24871	460 aa		6.11	□□□□□ -1.43
DBP9	YLR276C	SWC3	P31376	625 aa		6.11	□□□□□ -1.43
DBP9	YLR276C	EFB1	P32471	206 aa	Known RBP	6.11	□□□□□ -1.43
DBP9	YLR276C	PTH2	P34222	208 aa		6.11	□□□□□ -1.43
DBP9	YLR276C	CCT4	P39078	528 aa	Known RBP	6.11	□□□□□ -1.43
DBP9	YLR276C	LSB6	P42951	607 aa		6.11	□□□□□ -1.43
DBP9	YLR276C	DUG1	P43616	481 aa	Known RBP	6.11	□□□□□ -1.43
DBP9	YLR276C	NIT2	P47016	307 aa		6.11	□□□□□ -1.43
DBP9	YLR276C	NCS2	P53923	493 aa	Predicted RBP	6.11	□□□□□ -1.43
DBP9	YLR276C	ASI1	P54074	624 aa		6.11	□□□□□ -1.43
DBP9	YLR276C	YKU80	Q04437	629 aa		6.11	□□□□□ -1.43
DBP9	YLR276C	FAR8	Q05040	523 aa		6.11	□□□□□ -1.43
DBP9	YLR276C	ENT2	Q05785	613 aa		6.11	□□□□□ -1.43
DBP9	YLR276C	SGD1	Q06132	899 aa		6.11	□□□□□ -1.43
DBP9	YLR276C	MMR1	Q06324	491 aa		6.11	□□□□□ -1.43
DBP9	YLR276C	RRP6	Q12149	733 aa	Known RBP	6.11	□□□□□ -1.43
DBP9	YLR276C	CLF1	Q12309	687 aa	Predicted RBP	6.11	□□□□□ -1.43
DBP9	YLR276C	BNR1	P40450	1375 aa		6.11	□□□□□ -1.43
DBP9	YLR276C	MPH2	P0CD99	609 aa		6.11	□□□□□ -1.43
DBP9	YLR276C	RAD18	P10862	487 aa		6.11	□□□□□ -1.43
DBP9	YLR276C	TUP1	P16649	713 aa		6.11	□□□□□ -1.43
DBP9	YLR276C	RPO26	P20435	155 aa		6.11	□□□□□ -1.43
DBP9	YLR276C	IME1	P21190	360 aa		6.11	□□□□□ -1.43
DBP9	YLR276C	CDC10	P25342	322 aa	Known RBP	6.11	□□□□□ -1.43
DBP9	YLR276C	KCC4	P25389	1037 aa		6.11	□□□□□ -1.43
DBP9	YLR276C	PTP2	P29461	750 aa		6.11	□□□□□ -1.43
DBP9	YLR276C	MLS1	P30952	554 aa		6.11	□□□□□ -1.43
DBP9	YLR276C	AFR1	P33304	620 aa		6.11	□□□□□ -1.43
DBP9	YLR276C	RPC37	P36121	282 aa		6.11	□□□□□ -1.43
DBP9	YLR276C	PET100	P38958	111 aa		6.11	□□□□□ -1.43
DBP9	YLR276C	YJL181W	P46987	611 aa		6.11	□□□□□ -1.43
DBP9	YLR276C	YJR079W	P47126	109 aa		6.11	□□□□□ -1.43
DBP9	YLR276C	ILM1	P47155	203 aa		6.11	□□□□□ -1.43
DBP9	YLR276C	PBP1	P53297	722 aa	Known RBP	6.11	□□□□□ -1.43
DBP9	YLR276C	MFM1	Q02783	413 aa		6.11	□□□□□ -1.43
DBP9	YLR276C	SOG2	Q08817	791 aa		6.11	□□□□□ -1.43
DBP9	YLR276C	APL4	Q12028	832 aa		6.11	□□□□□ -1.43
DBP9	YLR276C	GNT1	Q12096	491 aa		6.11	□□□□□ -1.43
DBP9	YLR276C	RUD3	Q12234	484 aa	Known RBP	6.11	□□□□□ -1.43
DBP9	YLR276C	NTE1	Q04958	1679 aa		6.1	□□□□□ -1.43
DBP9	YLR276C	GCD2	P12754	651 aa	Predicted RBP	6.1	□□□□□ -1.43
DBP9	YLR276C	ARG1	P22768	420 aa		6.1	□□□□□ -1.43
DBP9	YLR276C	PRD1	P25375	712 aa		6.1	□□□□□ -1.43
DBP9	YLR276C	BUD14	P27637	709 aa		6.1	□□□□□ -1.43
DBP9	YLR276C	AAR2	P32357	355 aa	Predicted RBP	6.1	□□□□□ -1.43
DBP9	YLR276C	ALG3	P38179	458 aa		6.1	□□□□□ -1.43
DBP9	YLR276C	PIH1	P38768	344 aa		6.1	□□□□□ -1.43
DBP9	YLR276C	NUP60	P39705	539 aa		6.1	□□□□□ -1.43
DBP9	YLR276C	OAF1	P39720	1047 aa	Predicted RBP	6.1	□□□□□ -1.43
DBP9	YLR276C	UTP22	P53254	1237 aa	Predicted RBP	6.1	□□□□□ -1.43
DBP9	YLR276C	YLR177W	Q06251	628 aa		6.1	□□□□□ -1.43
DBP9	YLR276C	RTT109	Q07794	436 aa		6.1	□□□□□ -1.43
DBP9	YLR276C	YIG1	Q08956	461 aa		6.1	□□□□□ -1.43
DBP9	YLR276C	MDS3	P53094	1487 aa		6.1	□□□□□ -1.43
DBP9	YLR276C	SWI1	P09547	1314 aa		6.1	□□□□□ -1.43
DBP9	YLR276C	FAR1	P21268	830 aa		6.09	□□□□□ -1.43
DBP9	YLR276C	PRP19	P32523	503 aa	Known RBP	6.09	□□□□□ -1.43
DBP9	YLR276C	NIC96	P34077	839 aa		6.09	□□□□□ -1.43
DBP9	YLR276C	MRPL16	P38064	232 aa		6.09	□□□□□ -1.43
DBP9	YLR276C	REI1	P38344	393 aa	Predicted RBP	6.09	□□□□□ -1.43
DBP9	YLR276C	CKB2	P38930	258 aa		6.09	□□□□□ -1.43
DBP9	YLR276C	FET4	P40988	552 aa		6.09	□□□□□ -1.43
DBP9	YLR276C	ESF2	P53743	316 aa	Known RBP	6.09	□□□□□ -1.43
DBP9	YLR276C	EIS1	Q05050	843 aa	Known RBP	6.09	□□□□□ -1.43
DBP9	YLR276C	RIX7	Q07844	837 aa	Known RBP	6.09	□□□□□ -1.43
DBP9	YLR276C	RRP5	Q05022	1729 aa	Known RBP	6.09	□□□□□ -1.43
DBP9	YLR276C	YSP2	Q06681	1438 aa		6.09	□□□□□ -1.44
DBP9	YLR276C	AEP2	P22136	580 aa		6.08	□□□□□ -1.44
DBP9	YLR276C	BUD2	P33314	1104 aa		6.08	□□□□□ -1.44
DBP9	YLR276C	TFC3	P34111	1160 aa		6.08	□□□□□ -1.44
DBP9	YLR276C	PCM1	P38628	557 aa	Known RBP	6.08	□□□□□ -1.44
DBP9	YLR276C	OSH3	P38713	996 aa	Known RBP	6.08	□□□□□ -1.44
DBP9	YLR276C	PNT1	P38969	423 aa		6.08	□□□□□ -1.44
DBP9	YLR276C	VPS8	P39702	1274 aa		6.08	□□□□□ -1.44
DBP9	YLR276C	MRX1	P40050	688 aa		6.08	□□□□□ -1.44
DBP9	YLR276C	GPP2	P40106	250 aa	Known RBP	6.08	□□□□□ -1.44
DBP9	YLR276C	GCN20	P43535	752 aa	Known RBP	6.08	□□□□□ -1.44
DBP9	YLR276C	CAF16	P43569	289 aa		6.08	□□□□□ -1.44
DBP9	YLR276C	YJR098C	P47139	656 aa		6.08	□□□□□ -1.44
DBP9	YLR276C	UBP15	P50101	1230 aa		6.08	□□□□□ -1.44
DBP9	YLR276C	YDR341C	Q05506	607 aa	Known RBP	6.08	□□□□□ -1.44
DBP9	YLR276C	TSR1	Q07381	788 aa	Known RBP	6.08	□□□□□ -1.44
DBP9	YLR276C	YTM1	Q12024	460 aa	Predicted RBP	6.08	□□□□□ -1.44
DBP9	YLR276C	RRI2	Q12348	645 aa		6.08	□□□□□ -1.44
DBP9	YLR276C	NUP192	P47054	1683 aa		6.08	□□□□□ -1.44
DBP9	YLR276C	MRP10	O75012	95 aa		6.08	□□□□□ -1.44

Retrieved 100 of 5,963 RNA–protein pairs in 23.2 ms