RNA–Protein interactions for RNA: YIR013C

GAT4, Transcript of Protein containing GATA family zinc finger motifs, yeast

Gene GAT4, Length 366 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
GAT4	YIR013C	SEG1	Q04279	960 aa		5.8	□□□□□ -1.48
GAT4	YIR013C	POL2	P21951	2222 aa	Known RBP	5.8	□□□□□ -1.48
GAT4	YIR013C	RIP1	P08067	215 aa		5.79	□□□□□ -1.48
GAT4	YIR013C	DBP5	P20449	482 aa	Known RBP	5.79	□□□□□ -1.48
GAT4	YIR013C	CCR4	P31384	837 aa	Known RBP	5.79	□□□□□ -1.48
GAT4	YIR013C	TRM2	P33753	639 aa		5.79	□□□□□ -1.48
GAT4	YIR013C	YIL161W	P40449	235 aa	Known RBP	5.79	□□□□□ -1.48
GAT4	YIR013C	YNR065C	P53751	1116 aa		5.79	□□□□□ -1.48
GAT4	YIR013C	TDA7	P53882	636 aa	Predicted RBP	5.79	□□□□□ -1.48
GAT4	YIR013C	PGA2	P53903	129 aa		5.79	□□□□□ -1.48
GAT4	YIR013C	CDD1	Q06549	142 aa		5.79	□□□□□ -1.48
GAT4	YIR013C	TPK1	P06244	397 aa		5.78	□□□□□ -1.48
GAT4	YIR013C	MSF1	P08425	469 aa		5.78	□□□□□ -1.48
GAT4	YIR013C	TAF13	P11747	167 aa		5.78	□□□□□ -1.48
GAT4	YIR013C	RML2	P32611	393 aa		5.78	□□□□□ -1.48
GAT4	YIR013C	DCW1	P36091	449 aa		5.78	□□□□□ -1.48
GAT4	YIR013C	NUP60	P39705	539 aa		5.78	□□□□□ -1.48
GAT4	YIR013C	ATG32	P40458	529 aa		5.78	□□□□□ -1.48
GAT4	YIR013C	ORC5	P50874	479 aa		5.78	□□□□□ -1.48
GAT4	YIR013C	ARK1	P53974	638 aa		5.78	□□□□□ -1.48
GAT4	YIR013C	YLR407W	Q06070	228 aa		5.78	□□□□□ -1.48
GAT4	YIR013C	YCG1	Q06680	1035 aa		5.78	□□□□□ -1.48
GAT4	YIR013C	YOR389W	Q08912	624 aa		5.78	□□□□□ -1.48
GAT4	YIR013C	YPL278C	Q08990	100 aa		5.78	□□□□□ -1.48
GAT4	YIR013C	SUL2	Q12325	893 aa		5.78	□□□□□ -1.48
GAT4	YIR013C	MATALPHA2	P0CY08	210 aa		5.77	□□□□□ -1.49
GAT4	YIR013C	HMLALPHA2	P0CY09	210 aa		5.77	□□□□□ -1.49
GAT4	YIR013C	TPM1	P17536	199 aa	Known RBP	5.77	□□□□□ -1.49
GAT4	YIR013C	STE4	P18851	423 aa		5.77	□□□□□ -1.49
GAT4	YIR013C	EPL1	P43572	832 aa		5.77	□□□□□ -1.49
GAT4	YIR013C	IML2	P47031	731 aa		5.77	□□□□□ -1.49
GAT4	YIR013C	NRM1	P53718	249 aa		5.77	□□□□□ -1.49
GAT4	YIR013C	VTC3	Q02725	835 aa		5.77	□□□□□ -1.49
GAT4	YIR013C	GCN5	Q03330	439 aa		5.77	□□□□□ -1.49
GAT4	YIR013C	WAR1	Q03631	944 aa		5.77	□□□□□ -1.49
GAT4	YIR013C	TIF35	Q04067	274 aa	Known RBP	5.77	□□□□□ -1.49
GAT4	YIR013C	YLR456W	Q06199	204 aa		5.77	□□□□□ -1.49
GAT4	YIR013C	TAF10	Q12030	206 aa		5.77	□□□□□ -1.49
GAT4	YIR013C	HRP1	Q99383	534 aa	Known RBP	5.77	□□□□□ -1.49
GAT4	YIR013C	VPS1	P21576	704 aa	Known RBP	5.76	□□□□□ -1.49
GAT4	YIR013C	SWI4	P25302	1093 aa	Known RBP	5.76	□□□□□ -1.49
GAT4	YIR013C	YHR054C	P38780	354 aa		5.76	□□□□□ -1.49
GAT4	YIR013C	YJR061W	P40355	935 aa		5.76	□□□□□ -1.49
GAT4	YIR013C	YIR014W	P40570	242 aa		5.76	□□□□□ -1.49
GAT4	YIR013C	SUM1	P46676	1062 aa		5.76	□□□□□ -1.49
GAT4	YIR013C	VPS70	P47161	811 aa		5.76	□□□□□ -1.49
GAT4	YIR013C	MNN10	P50108	393 aa	Known RBP	5.76	□□□□□ -1.49
GAT4	YIR013C	PRM6	Q04705	352 aa		5.76	□□□□□ -1.49
GAT4	YIR013C	YLH47	Q06493	454 aa		5.76	□□□□□ -1.49
GAT4	YIR013C	ERF2	Q06551	359 aa		5.76	□□□□□ -1.49
GAT4	YIR013C	GAL4	P04386	881 aa		5.75	□□□□□ -1.49
GAT4	YIR013C	CDC6	P09119	513 aa		5.75	□□□□□ -1.49
GAT4	YIR013C	NAM7	P30771	971 aa	Known RBP	5.75	□□□□□ -1.49
GAT4	YIR013C	MET4	P32389	672 aa		5.75	□□□□□ -1.49
GAT4	YIR013C	PGM2	P37012	569 aa	Known RBP	5.75	□□□□□ -1.49
GAT4	YIR013C	ERV46	P39727	415 aa		5.75	□□□□□ -1.49
GAT4	YIR013C	PTI1	P39927	425 aa	Predicted RBP	5.75	□□□□□ -1.49
GAT4	YIR013C	LTP1	P40347	161 aa		5.75	□□□□□ -1.49
GAT4	YIR013C	NUP84	P52891	726 aa		5.75	□□□□□ -1.49
GAT4	YIR013C	SHE10	P53075	577 aa		5.75	□□□□□ -1.49
GAT4	YIR013C	CEG1	Q01159	459 aa	Predicted RBP	5.75	□□□□□ -1.49
GAT4	YIR013C	TOF2	Q02208	771 aa		5.75	□□□□□ -1.49
GAT4	YIR013C	FUS2	Q05670	677 aa		5.75	□□□□□ -1.49
GAT4	YIR013C	SLK19	Q08581	821 aa	Known RBP	5.75	□□□□□ -1.49
GAT4	YIR013C	RAD3	P06839	778 aa		5.74	□□□□□ -1.49
GAT4	YIR013C	RPL43A	P0CX25	92 aa	Known RBP	5.74	□□□□□ -1.49
GAT4	YIR013C	RPL43B	P0CX26	92 aa		5.74	□□□□□ -1.49
GAT4	YIR013C	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	5.74	□□□□□ -1.49	not detected
GAT4	YIR013C	PTP1	P25044	335 aa		5.74	□□□□□ -1.49
GAT4	YIR013C	RPC53	P25441	422 aa		5.74	□□□□□ -1.49
GAT4	YIR013C	TKL2	P33315	681 aa		5.74	□□□□□ -1.49
GAT4	YIR013C	VPS35	P34110	944 aa		5.74	□□□□□ -1.49
GAT4	YIR013C	BMH2	P34730	273 aa	Known RBP	5.74	□□□□□ -1.49
GAT4	YIR013C	PFS1	P38872	237 aa		5.74	□□□□□ -1.49
GAT4	YIR013C	TIF34	P40217	347 aa	Known RBP	5.74	□□□□□ -1.49
GAT4	YIR013C	KRI1	P42846	591 aa	Known RBP	5.74	□□□□□ -1.49
GAT4	YIR013C	SCD6	P45978	349 aa	Known RBP RIP-Chip data	5.74	□□□□□ -1.49	not detected
GAT4	YIR013C	CTF18	P49956	741 aa		5.74	□□□□□ -1.49
GAT4	YIR013C	COQ6	P53318	479 aa		5.74	□□□□□ -1.49
GAT4	YIR013C	NOP13	P53883	403 aa	Known RBP RIP-Chip data	5.74	□□□□□ -1.49	not detected
GAT4	YIR013C	YMR187C	Q03236	431 aa		5.74	□□□□□ -1.49
GAT4	YIR013C	TRS120	Q04183	1289 aa		5.74	□□□□□ -1.49
GAT4	YIR013C	SAM3	Q08986	587 aa		5.74	□□□□□ -1.49
GAT4	YIR013C	GPM2	Q12008	311 aa		5.74	□□□□□ -1.49
GAT4	YIR013C	RNR2	P09938	399 aa	Known RBP	5.73	□□□□□ -1.49
GAT4	YIR013C	THR4	P16120	514 aa	Known RBP	5.73	□□□□□ -1.49
GAT4	YIR013C	TBS1	P38114	1094 aa		5.73	□□□□□ -1.49
GAT4	YIR013C	OPY1	P38271	328 aa		5.73	□□□□□ -1.49
GAT4	YIR013C	ATG12	P38316	186 aa		5.73	□□□□□ -1.49
GAT4	YIR013C	PIH1	P38768	344 aa		5.73	□□□□□ -1.49
GAT4	YIR013C	RPN10	P38886	268 aa	Known RBP	5.73	□□□□□ -1.49
GAT4	YIR013C	HEM14	P40012	539 aa		5.73	□□□□□ -1.49
GAT4	YIR013C	ASN1	P49089	572 aa	Known RBP	5.73	□□□□□ -1.49
GAT4	YIR013C	YKE2	P52553	114 aa		5.73	□□□□□ -1.49
GAT4	YIR013C	NPY1	P53164	384 aa		5.73	□□□□□ -1.49
GAT4	YIR013C	ARP5	P53946	755 aa		5.73	□□□□□ -1.49
GAT4	YIR013C	CLU1	Q03690	1277 aa	Known RBP	5.73	□□□□□ -1.49
GAT4	YIR013C	GPR1	Q12361	961 aa		5.73	□□□□□ -1.49
GAT4	YIR013C	SMC6	Q12749	1114 aa		5.73	□□□□□ -1.49
GAT4	YIR013C	HFA1	P32874	2273 aa		5.72	□□□□□ -1.49

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