RNA–Protein interactions for RNA: YHR105W

YPT35, Transcript of Endosomal protein of unknown function, yeast

Gene YPT35, Length 645 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YPT35	YHR105W	VPS62	P53285	467 aa		4.63	□□□□□ -1.67
YPT35	YHR105W	ASM4	Q05166	528 aa		4.63	□□□□□ -1.67
YPT35	YHR105W	BUD21	Q08492	214 aa	Predicted RBP	4.63	□□□□□ -1.67
YPT35	YHR105W	PRC1	P00729	532 aa		4.62	□□□□□ -1.67
YPT35	YHR105W	MNN4	P36044	1178 aa		4.62	□□□□□ -1.67
YPT35	YHR105W	VPS24	P36095	224 aa	Known RBP	4.62	□□□□□ -1.67
YPT35	YHR105W	SAP190	P36123	1033 aa		4.62	□□□□□ -1.67
YPT35	YHR105W	IES5	P40060	125 aa		4.62	□□□□□ -1.67
YPT35	YHR105W	YIL108W	P40483	696 aa	Known RBP	4.62	□□□□□ -1.67
YPT35	YHR105W	SHR5	P41912	237 aa		4.62	□□□□□ -1.67
YPT35	YHR105W	MET12	P46151	657 aa		4.62	□□□□□ -1.67
YPT35	YHR105W	BNA2	P47125	453 aa		4.62	□□□□□ -1.67
YPT35	YHR105W	ZIP2	P53061	704 aa		4.62	□□□□□ -1.67
YPT35	YHR105W	NPY1	P53164	384 aa		4.62	□□□□□ -1.67
YPT35	YHR105W	PBP1	P53297	722 aa	Known RBP	4.62	□□□□□ -1.67
YPT35	YHR105W	DUS1	P53759	423 aa	Known RBP	4.62	□□□□□ -1.67
YPT35	YHR105W	MET14	Q02196	202 aa		4.62	□□□□□ -1.67
YPT35	YHR105W	LEE1	Q02799	301 aa	Known RBP	4.62	□□□□□ -1.67
YPT35	YHR105W	YAP6	Q03935	383 aa		4.62	□□□□□ -1.67
YPT35	YHR105W	RPN7	Q06103	429 aa	Known RBP	4.62	□□□□□ -1.67
YPT35	YHR105W	RXT3	Q07458	294 aa		4.62	□□□□□ -1.67
YPT35	YHR105W	ACK1	Q07622	623 aa	Predicted RBP	4.62	□□□□□ -1.67
YPT35	YHR105W	HFI1	Q12060	488 aa		4.62	□□□□□ -1.67
YPT35	YHR105W	GPR1	Q12361	961 aa		4.62	□□□□□ -1.67
YPT35	YHR105W	PRE10	P21242	288 aa	Known RBP RIP-Chip data	4.61	□□□□□ -1.67	not detected
YPT35	YHR105W	OAF3	P36023	863 aa		4.61	□□□□□ -1.67
YPT35	YHR105W	DID4	P36108	232 aa		4.61	□□□□□ -1.67
YPT35	YHR105W	YKR018C	P36114	725 aa		4.61	□□□□□ -1.67
YPT35	YHR105W	BIT2	P38346	545 aa		4.61	□□□□□ -1.67
YPT35	YHR105W	RRP8	P38961	392 aa	Known RBP	4.61	□□□□□ -1.67
YPT35	YHR105W	RMP1	Q12530	201 aa		4.61	□□□□□ -1.67
YPT35	YHR105W	GAL1	P04385	528 aa		4.6	□□□□□ -1.67
YPT35	YHR105W	HIS5	P07172	385 aa		4.6	□□□□□ -1.67
YPT35	YHR105W	YEF3	P16521	1044 aa	Known RBP	4.6	□□□□□ -1.67
YPT35	YHR105W	ATP12	P22135	325 aa		4.6	□□□□□ -1.67
YPT35	YHR105W	RSC8	P43609	557 aa	Known RBP	4.6	□□□□□ -1.67
YPT35	YHR105W	CHA4	P43634	648 aa		4.6	□□□□□ -1.67
YPT35	YHR105W	PSP2	P50109	593 aa	Known RBP	4.6	□□□□□ -1.67
YPT35	YHR105W	PIP2	P52960	996 aa		4.6	□□□□□ -1.67
YPT35	YHR105W	BRE5	P53741	515 aa	Known RBP	4.6	□□□□□ -1.67
YPT35	YHR105W	CLU1	Q03690	1277 aa	Known RBP	4.6	□□□□□ -1.67
YPT35	YHR105W	YHM2	Q04013	314 aa		4.6	□□□□□ -1.67
YPT35	YHR105W	PHM6	Q05637	104 aa		4.6	□□□□□ -1.67
YPT35	YHR105W	ECM38	Q05902	660 aa	Predicted RBP	4.6	□□□□□ -1.67
YPT35	YHR105W	APM4	Q99186	491 aa		4.6	□□□□□ -1.67
YPT35	YHR105W	SKI3	P17883	1432 aa	Known RBP	4.6	□□□□□ -1.67
YPT35	YHR105W	COX11	P19516	300 aa	Known RBP	4.59	□□□□□ -1.67
YPT35	YHR105W	PWP2	P25635	923 aa	Known RBP	4.59	□□□□□ -1.67
YPT35	YHR105W	MAL31	P38156	614 aa		4.59	□□□□□ -1.67
YPT35	YHR105W	CTF8	P38877	133 aa		4.59	□□□□□ -1.67
YPT35	YHR105W	URM1	P40554	99 aa	Predicted RBP	4.59	□□□□□ -1.67
YPT35	YHR105W	PCL10	P53124	433 aa		4.59	□□□□□ -1.67
YPT35	YHR105W	PUS2	P53167	370 aa		4.59	□□□□□ -1.67
YPT35	YHR105W	SKY1	Q03656	742 aa		4.59	□□□□□ -1.67
YPT35	YHR105W	YPR027C	Q12079	277 aa		4.59	□□□□□ -1.67
YPT35	YHR105W	UPC2	Q12151	913 aa		4.59	□□□□□ -1.67
YPT35	YHR105W	NYV1	Q12255	253 aa		4.59	□□□□□ -1.67
YPT35	YHR105W	PGI1	P12709	554 aa	Known RBP	4.58	□□□□□ -1.68
YPT35	YHR105W	PRP4	P20053	465 aa	Known RBP	4.58	□□□□□ -1.68
YPT35	YHR105W	STE14	P32584	239 aa		4.58	□□□□□ -1.68
YPT35	YHR105W	NIC96	P34077	839 aa		4.58	□□□□□ -1.68
YPT35	YHR105W	LST4	P34239	828 aa		4.58	□□□□□ -1.68
YPT35	YHR105W	MPT5	P39016	859 aa	Known RBP RIP-Chip data	4.58	□□□□□ -1.68	not detected
YPT35	YHR105W	PLB1	P39105	664 aa		4.58	□□□□□ -1.68
YPT35	YHR105W	SDP1	P40479	209 aa		4.58	□□□□□ -1.68
YPT35	YHR105W	YFL052W	P43551	465 aa		4.58	□□□□□ -1.68
YPT35	YHR105W	YJR039W	P47107	1121 aa		4.58	□□□□□ -1.68
YPT35	YHR105W	VPS30	Q02948	557 aa		4.58	□□□□□ -1.68
YPT35	YHR105W	YLR224W	Q05947	369 aa		4.58	□□□□□ -1.68
YPT35	YHR105W	SWI6	P09959	803 aa		4.57	□□□□□ -1.68
YPT35	YHR105W	APA1	P16550	321 aa	Known RBP	4.57	□□□□□ -1.68
YPT35	YHR105W	KCC4	P25389	1037 aa		4.57	□□□□□ -1.68
YPT35	YHR105W	SEC65	P29478	273 aa		4.57	□□□□□ -1.68
YPT35	YHR105W	SSZ1	P38788	538 aa	Known RBP	4.57	□□□□□ -1.68
YPT35	YHR105W	BEM4	P39011	633 aa		4.57	□□□□□ -1.68
YPT35	YHR105W	SSY5	P47002	699 aa		4.57	□□□□□ -1.68
YPT35	YHR105W	NCS6	P53088	359 aa		4.57	□□□□□ -1.68
YPT35	YHR105W	SPC105	P53148	917 aa		4.57	□□□□□ -1.68
YPT35	YHR105W	UBX4	P54730	416 aa		4.57	□□□□□ -1.68
YPT35	YHR105W	SVL3	Q03088	825 aa	Known RBP	4.57	□□□□□ -1.68
YPT35	YHR105W	NOP12	Q08208	459 aa	Known RBP	4.57	□□□□□ -1.68
YPT35	YHR105W	KAR1	P11927	433 aa		4.56	□□□□□ -1.68
YPT35	YHR105W	TRX2	P22803	104 aa	Known RBP	4.56	□□□□□ -1.68
YPT35	YHR105W	ATG19	P35193	415 aa		4.56	□□□□□ -1.68
YPT35	YHR105W	SHM2	P37291	469 aa	Known RBP	4.56	□□□□□ -1.68
YPT35	YHR105W	KTR4	P38131	464 aa		4.56	□□□□□ -1.68
YPT35	YHR105W	YHR078W	P38799	552 aa		4.56	□□□□□ -1.68
YPT35	YHR105W	ATG16	Q03818	150 aa		4.56	□□□□□ -1.68
YPT35	YHR105W	ECM16	Q04217	1267 aa	Known RBP	4.56	□□□□□ -1.68
YPT35	YHR105W	TMA10	Q06177	86 aa		4.56	□□□□□ -1.68
YPT35	YHR105W	KCS1	Q12494	1050 aa		4.56	□□□□□ -1.68
YPT35	YHR105W	CDC26	P14724	124 aa		4.55	□□□□□ -1.68
YPT35	YHR105W	CTS1	P29029	562 aa		4.55	□□□□□ -1.68
YPT35	YHR105W	TRZ1	P36159	838 aa	Predicted RBP	4.55	□□□□□ -1.68
YPT35	YHR105W	MIP6	P38760	659 aa	Known RBP	4.55	□□□□□ -1.68
YPT35	YHR105W	SUB1	P54000	292 aa	Known RBP	4.55	□□□□□ -1.68
YPT35	YHR105W	CEG1	Q01159	459 aa	Predicted RBP	4.55	□□□□□ -1.68
YPT35	YHR105W	PTA1	Q01329	785 aa	Predicted RBP	4.55	□□□□□ -1.68
YPT35	YHR105W	SLU7	Q02775	382 aa	Known RBP	4.55	□□□□□ -1.68
YPT35	YHR105W	PEX15	Q08215	383 aa		4.55	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 8827.1 ms