RNA–Protein interactions for RNA: YHR026W

VMA16, Transcript of Subunit c'' of the vacuolar ATPase, yeastyeast

Gene VMA16, Length 642 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMA16YHR026W ELM1P32801 640 aa6.2□□□□□ -1.42
VMA16YHR026W MYO3P36006 1272 aa6.2□□□□□ -1.42
VMA16YHR026W RSM26P47141 266 aa6.2□□□□□ -1.42
VMA16YHR026W YLR455WQ06188 304 aa6.2□□□□□ -1.42
VMA16YHR026W ELG1Q12050 791 aa6.2□□□□□ -1.42
VMA16YHR026W YDR215CQ12240 137 aa6.2□□□□□ -1.42
VMA16YHR026W CLF1Q12309 687 aaPredicted RBP6.2□□□□□ -1.42
VMA16YHR026W BET2P20133 325 aa6.19□□□□□ -1.42
VMA16YHR026W ANP1P32629 500 aa6.19□□□□□ -1.42
VMA16YHR026W DRE2P36152 348 aa6.19□□□□□ -1.42
VMA16YHR026W KTR4P38131 464 aa6.19□□□□□ -1.42
VMA16YHR026W YHL017WP38745 532 aa6.19□□□□□ -1.42
VMA16YHR026W BUD16P39988 312 aa6.19□□□□□ -1.42
VMA16YHR026W HDA1P53973 706 aa6.19□□□□□ -1.42
VMA16YHR026W RPT6Q01939 405 aaKnown RBP6.19□□□□□ -1.42
VMA16YHR026W SSF2Q12153 453 aaPredicted RBP6.19□□□□□ -1.42
VMA16YHR026W PUS1Q12211 544 aaKnown RBP6.19□□□□□ -1.42
VMA16YHR026W TY1A-LR4P0C2I8 440 aaKnown RBP6.18□□□□□ -1.42
VMA16YHR026W RPL40AP0CH08 128 aaKnown RBP6.18□□□□□ -1.42
VMA16YHR026W RPL40BP0CH09 128 aaKnown RBP6.18□□□□□ -1.42
VMA16YHR026W TY1A-DR6P0CX70 440 aa6.18□□□□□ -1.42
VMA16YHR026W TY1A-ER1P0CX71 440 aa6.18□□□□□ -1.42
VMA16YHR026W TY1A-LR2P0CX72 440 aa6.18□□□□□ -1.42
VMA16YHR026W TY1A-PLP0CX73 440 aa6.18□□□□□ -1.42
VMA16YHR026W TY1A-JR1P0CX74 440 aa6.18□□□□□ -1.42
VMA16YHR026W TY1A-LR3P0CX75 440 aa6.18□□□□□ -1.42
VMA16YHR026W TY1A-ML2P0CX76 440 aa6.18□□□□□ -1.42
VMA16YHR026W TAF13P11747 167 aa6.18□□□□□ -1.42
VMA16YHR026W CYC8P14922 966 aa6.18□□□□□ -1.42
VMA16YHR026W PEP3P27801 918 aa6.18□□□□□ -1.42
VMA16YHR026W PRX1P34227 261 aaKnown RBP6.18□□□□□ -1.42
VMA16YHR026W SQT1P35184 431 aa6.18□□□□□ -1.42
VMA16YHR026W SKI2P35207 1287 aaKnown RBP RIP-Chip data6.18□□□□□ -1.42not detected
VMA16YHR026W MAE1P36013 669 aaKnown RBP6.18□□□□□ -1.42
VMA16YHR026W TVP38P36164 337 aa6.18□□□□□ -1.42
VMA16YHR026W HMF1P40037 129 aaKnown RBP6.18□□□□□ -1.42
VMA16YHR026W YJL045WP47052 634 aa6.18□□□□□ -1.42
VMA16YHR026W PSP2P50109 593 aaKnown RBP6.18□□□□□ -1.42
VMA16YHR026W DSE4P53753 1117 aa6.18□□□□□ -1.42
VMA16YHR026W HCR1Q05775 265 aaKnown RBP6.18□□□□□ -1.42
VMA16YHR026W SGO1Q08490 590 aa6.18□□□□□ -1.42
VMA16YHR026W MCA1Q08601 432 aa6.18□□□□□ -1.42
VMA16YHR026W TY1A-GR1Q12085 440 aa6.18□□□□□ -1.42
VMA16YHR026W YPL150WQ12152 901 aa6.18□□□□□ -1.42
VMA16YHR026W TY1A-PR3Q6Q5H1 440 aaKnown RBP6.18□□□□□ -1.42
VMA16YHR026W TY1A-OLQ92392 440 aaKnown RBP6.18□□□□□ -1.42
VMA16YHR026W MATALPHA2P0CY08 210 aa6.17□□□□□ -1.42
VMA16YHR026W HMLALPHA2P0CY09 210 aa6.17□□□□□ -1.42
VMA16YHR026W MSH3P25336 1018 aa6.17□□□□□ -1.42
VMA16YHR026W RME1P32338 300 aaKnown RBP6.17□□□□□ -1.42
VMA16YHR026W TAT1P38085 619 aa6.17□□□□□ -1.42
VMA16YHR026W RKM3P38222 552 aa6.17□□□□□ -1.42
VMA16YHR026W MMF1P40185 145 aaKnown RBP6.17□□□□□ -1.42
VMA16YHR026W CCT5P40413 562 aaKnown RBP6.17□□□□□ -1.42
VMA16YHR026W CTF18P49956 741 aa6.17□□□□□ -1.42
VMA16YHR026W YKE2P52553 114 aa6.17□□□□□ -1.42
VMA16YHR026W RSC1P53236 928 aa6.17□□□□□ -1.42
VMA16YHR026W ARP5P53946 755 aa6.17□□□□□ -1.42
VMA16YHR026W YPL109CQ02981 657 aa6.17□□□□□ -1.42
VMA16YHR026W VIP1Q06685 1146 aaKnown RBP6.17□□□□□ -1.42
VMA16YHR026W PEX19Q07418 342 aa6.17□□□□□ -1.42
VMA16YHR026W ALG6Q12001 544 aaKnown RBP6.17□□□□□ -1.42
VMA16YHR026W TY1A-NL1Q12391 440 aaKnown RBP6.17□□□□□ -1.42
VMA16YHR026W UBC1P21734 215 aaKnown RBP6.16□□□□□ -1.42
VMA16YHR026W PWP2P25635 923 aaKnown RBP6.16□□□□□ -1.42
VMA16YHR026W YKL077WP36081 392 aa6.16□□□□□ -1.42
VMA16YHR026W RFS1P38234 210 aaKnown RBP6.16□□□□□ -1.42
VMA16YHR026W ARP1P38696 384 aa6.16□□□□□ -1.42
VMA16YHR026W PEX28P38848 579 aa6.16□□□□□ -1.42
VMA16YHR026W PIC2P40035 300 aa6.16□□□□□ -1.42
VMA16YHR026W MOB1P40484 314 aa6.16□□□□□ -1.42
VMA16YHR026W YFL052WP43551 465 aa6.16□□□□□ -1.42
VMA16YHR026W GCV2P49095 1034 aa6.16□□□□□ -1.42
VMA16YHR026W HUL5P53119 910 aa6.16□□□□□ -1.42
VMA16YHR026W YGL081WP53156 320 aa6.16□□□□□ -1.42
VMA16YHR026W MUK1Q02866 612 aa6.16□□□□□ -1.42
VMA16YHR026W ADI1Q03677 179 aa6.16□□□□□ -1.42
VMA16YHR026W YIG1Q08956 461 aa6.16□□□□□ -1.42
VMA16YHR026W IRA2P19158 3079 aa6.15□□□□□ -1.42
VMA16YHR026W CPA2P03965 1118 aaKnown RBP6.15□□□□□ -1.42
VMA16YHR026W RPL8AP17076 256 aaKnown RBP6.15□□□□□ -1.42
VMA16YHR026W SRP54P20424 541 aaKnown RBP6.15□□□□□ -1.42
VMA16YHR026W PUP3P25451 205 aaKnown RBP6.15□□□□□ -1.42
VMA16YHR026W ADK2P26364 225 aa6.15□□□□□ -1.42
VMA16YHR026W BUD2P33314 1104 aa6.15□□□□□ -1.42
VMA16YHR026W EBP2P36049 427 aaKnown RBP6.15□□□□□ -1.42
VMA16YHR026W EXO5P38289 585 aa6.15□□□□□ -1.42
VMA16YHR026W CRG1P38892 291 aaRIP-Chip data6.15□□□□□ -1.42not detected
VMA16YHR026W YEL025CP39991 1188 aa6.15□□□□□ -1.42
VMA16YHR026W TPM2P40414 161 aa6.15□□□□□ -1.42
VMA16YHR026W MRPS18P42847 217 aa6.15□□□□□ -1.42
VMA16YHR026W SLS1P42900 643 aa6.15□□□□□ -1.42
VMA16YHR026W SAD1P43589 448 aa6.15□□□□□ -1.42
VMA16YHR026W MDR1P53258 950 aa6.15□□□□□ -1.42
VMA16YHR026W MDM1Q01846 1127 aa6.15□□□□□ -1.42
VMA16YHR026W SPN1Q06505 410 aaPredicted RBP6.15□□□□□ -1.42
VMA16YHR026W AI3P03877 415 aa6.14□□□□□ -1.43
VMA16YHR026W SNF1P06782 633 aaKnown RBP6.14□□□□□ -1.43
VMA16YHR026W SES1P07284 462 aaKnown RBP6.14□□□□□ -1.43
VMA16YHR026W PRE9P23638 258 aaKnown RBP6.14□□□□□ -1.43
Retrieved 100 of 5,963 RNA–protein pairs in 63.2 ms