RNA–Protein interactions for RNA: YHL030W

ECM29, Transcript of Scaffold protein, yeastyeast

Gene ECM29, Length 5,607 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ECM29YHL030W HSM3P38348 480 aa2.86□□□□□ -1.95
ECM29YHL030W AIM23P47015 356 aa2.86□□□□□ -1.95
ECM29YHL030W EMC2P47133 292 aaKnown RBP2.86□□□□□ -1.95
ECM29YHL030W COG2P53271 262 aa2.86□□□□□ -1.95
ECM29YHL030W NOG2P53742 486 aaKnown RBP2.86□□□□□ -1.95
ECM29YHL030W YDR090CQ03193 310 aa2.86□□□□□ -1.95
ECM29YHL030W NHP10Q03435 203 aa2.86□□□□□ -1.95
ECM29YHL030W YCS4Q06156 1176 aa2.86□□□□□ -1.95
ECM29YHL030W POM152P39685 1337 aa2.86□□□□□ -1.95
ECM29YHL030W RSF2P46974 1380 aa2.86□□□□□ -1.95
ECM29YHL030W PPR1P07272 904 aaPredicted RBP2.86□□□□□ -1.95
ECM29YHL030W GPA2P10823 449 aa2.86□□□□□ -1.95
ECM29YHL030W REB1P21538 810 aa2.86□□□□□ -1.95
ECM29YHL030W YCR016WP25617 290 aaKnown RBP2.86□□□□□ -1.95
ECM29YHL030W MVD1P32377 396 aaKnown RBP2.86□□□□□ -1.95
ECM29YHL030W MRS6P32864 603 aaKnown RBP2.86□□□□□ -1.95
ECM29YHL030W KTR2P33550 425 aa2.86□□□□□ -1.95
ECM29YHL030W GEM1P39722 662 aa2.86□□□□□ -1.95
ECM29YHL030W CSM2P40465 213 aa2.86□□□□□ -1.95
ECM29YHL030W CAB2P40506 365 aa2.86□□□□□ -1.95
ECM29YHL030W YGL176CP46945 554 aa2.86□□□□□ -1.95
ECM29YHL030W YJL049WP47048 450 aa2.86□□□□□ -1.95
ECM29YHL030W YMR1P47147 688 aaKnown RBP RIP-Chip data2.86□□□□□ -1.95not detected
ECM29YHL030W IST1P53843 298 aaPredicted RBP2.86□□□□□ -1.95
ECM29YHL030W HOT1Q03213 719 aa2.86□□□□□ -1.95
ECM29YHL030W OYE2Q03558 400 aaKnown RBP2.86□□□□□ -1.95
ECM29YHL030W PRM6Q04705 352 aa2.86□□□□□ -1.95
ECM29YHL030W SEC10Q06245 871 aa2.86□□□□□ -1.95
ECM29YHL030W GRE2Q12068 342 aaKnown RBP2.86□□□□□ -1.95
ECM29YHL030W SGT2Q12118 346 aaKnown RBP2.86□□□□□ -1.95
ECM29YHL030W MSH5Q12175 901 aa2.86□□□□□ -1.95
ECM29YHL030W LSO1Q3E827 93 aa2.86□□□□□ -1.95
ECM29YHL030W CDC31P06704 161 aaKnown RBP2.86□□□□□ -1.95
ECM29YHL030W PCK1P10963 549 aa2.86□□□□□ -1.95
ECM29YHL030W MSM1P22438 575 aa2.86□□□□□ -1.95
ECM29YHL030W ARF3P40994 183 aaRIP-Chip data2.86□□□□□ -1.95not detected
ECM29YHL030W DIM1P41819 318 aaKnown RBP2.86□□□□□ -1.95
ECM29YHL030W MNN11P46985 422 aaKnown RBP2.86□□□□□ -1.95
ECM29YHL030W PSP2P50109 593 aaKnown RBP2.86□□□□□ -1.95
ECM29YHL030W YGR111WP53265 400 aa2.86□□□□□ -1.95
ECM29YHL030W COP1P53622 1201 aaKnown RBP2.86□□□□□ -1.95
ECM29YHL030W ORC3P54790 616 aa2.86□□□□□ -1.95
ECM29YHL030W ACL4Q03771 387 aa2.86□□□□□ -1.95
ECM29YHL030W ATG16Q03818 150 aa2.86□□□□□ -1.95
ECM29YHL030W SPC2Q04969 178 aa2.86□□□□□ -1.95
ECM29YHL030W RSB1Q08417 382 aa2.86□□□□□ -1.95
ECM29YHL030W AEP2P22136 580 aa2.86□□□□□ -1.95
ECM29YHL030W NPP1P25353 742 aa2.86□□□□□ -1.95
ECM29YHL030W YRB1P41920 201 aaKnown RBP2.86□□□□□ -1.95
ECM29YHL030W HXT10P43581 546 aa2.86□□□□□ -1.95
ECM29YHL030W ACF4P47129 309 aa2.86□□□□□ -1.95
ECM29YHL030W ADI1Q03677 179 aa2.86□□□□□ -1.95
ECM29YHL030W YMR010WQ03687 405 aa2.86□□□□□ -1.95
ECM29YHL030W UFO1Q04511 668 aa2.86□□□□□ -1.95
ECM29YHL030W GSF2Q04697 403 aaKnown RBP2.86□□□□□ -1.95
ECM29YHL030W SFH1Q06168 426 aa2.86□□□□□ -1.95
ECM29YHL030W SPE3Q12074 293 aaKnown RBP2.86□□□□□ -1.95
ECM29YHL030W GCD1P09032 578 aaPredicted RBP2.85□□□□□ -1.95
ECM29YHL030W PCM1P38628 557 aaKnown RBP2.85□□□□□ -1.95
ECM29YHL030W SCS2P40075 244 aaKnown RBP2.85□□□□□ -1.95
ECM29YHL030W ALG5P40350 334 aa2.85□□□□□ -1.95
ECM29YHL030W USA1Q03714 838 aa2.85□□□□□ -1.95
ECM29YHL030W TAF11Q04226 346 aa2.85□□□□□ -1.95
ECM29YHL030W TY1B-AO13527 1196 aaKnown RBP2.85□□□□□ -1.95
ECM29YHL030W REP1P03871 373 aa2.85□□□□□ -1.95
ECM29YHL030W YER152CP10356 443 aa2.85□□□□□ -1.95
ECM29YHL030W NAT1P12945 854 aaKnown RBP2.85□□□□□ -1.95
ECM29YHL030W VPS1P21576 704 aaKnown RBP2.85□□□□□ -1.95
ECM29YHL030W SEC15P22224 910 aa2.85□□□□□ -1.95
ECM29YHL030W MSH2P25847 964 aa2.85□□□□□ -1.95
ECM29YHL030W RPC82P32349 654 aa2.85□□□□□ -1.95
ECM29YHL030W MUD1P32605 298 aaKnown RBP2.85□□□□□ -1.95
ECM29YHL030W SHE3P38272 425 aaKnown RBP2.85□□□□□ -1.95
ECM29YHL030W SWP82P43554 623 aa2.85□□□□□ -1.95
ECM29YHL030W RPN11P43588 306 aaKnown RBP2.85□□□□□ -1.95
ECM29YHL030W ALT2P52892 507 aa2.85□□□□□ -1.95
ECM29YHL030W EFM6P53970 246 aa2.85□□□□□ -1.95
ECM29YHL030W VPS16Q03308 798 aa2.85□□□□□ -1.95
ECM29YHL030W COS7Q07788 383 aa2.85□□□□□ -1.95
ECM29YHL030W CFT2Q12102 859 aaPredicted RBP2.85□□□□□ -1.95
ECM29YHL030W SLP1Q12232 587 aa2.85□□□□□ -1.95
ECM29YHL030W HRT3Q12347 344 aa2.85□□□□□ -1.95
ECM29YHL030W SAC3P46674 1301 aa2.85□□□□□ -1.95
ECM29YHL030W FOB1O13329 566 aa2.85□□□□□ -1.95
ECM29YHL030W INO1P11986 533 aa2.85□□□□□ -1.95
ECM29YHL030W CDC34P14682 295 aa2.85□□□□□ -1.95
ECM29YHL030W NUP120P35729 1037 aa2.85□□□□□ -1.95
ECM29YHL030W STV1P37296 890 aa2.85□□□□□ -1.95
ECM29YHL030W BRL1P38770 471 aa2.85□□□□□ -1.95
ECM29YHL030W FTR1P40088 404 aa2.85□□□□□ -1.95
ECM29YHL030W JEM1P40358 645 aa2.85□□□□□ -1.95
ECM29YHL030W EFM4P40516 257 aa2.85□□□□□ -1.95
ECM29YHL030W TDA10P42938 290 aa2.85□□□□□ -1.95
ECM29YHL030W YGL108CP53139 140 aa2.85□□□□□ -1.95
ECM29YHL030W PLP1Q04004 230 aa2.85□□□□□ -1.95
ECM29YHL030W MUS81Q04149 632 aaPredicted RBP2.85□□□□□ -1.95
ECM29YHL030W HDA3Q06623 655 aa2.85□□□□□ -1.95
ECM29YHL030W UTP4Q06679 776 aaKnown RBP2.85□□□□□ -1.95
ECM29YHL030W THI20Q08224 551 aa2.85□□□□□ -1.95
ECM29YHL030W YRR1Q12172 810 aa2.85□□□□□ -1.95
Retrieved 100 of 5,963 RNA–protein pairs in 10.7 ms