RNA–Protein interactions for RNA: YGL172W

NUP49, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP49, Length 1,419 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP49YGL172W OPT1P40897 799 aa7.27□□□□□ -1.25
NUP49YGL172W RSC8P43609 557 aaKnown RBP7.27□□□□□ -1.25
NUP49YGL172W CPR7P47103 393 aa7.27□□□□□ -1.25
NUP49YGL172W EEB1Q02891 456 aa7.27□□□□□ -1.25
NUP49YGL172W SNU56Q03782 492 aaKnown RBP7.27□□□□□ -1.25
NUP49YGL172W CDD1Q06549 142 aa7.27□□□□□ -1.25
NUP49YGL172W ABP140Q08641 628 aaKnown RBP7.27□□□□□ -1.25
NUP49YGL172W CIT2P08679 460 aa7.26□□□□□ -1.25
NUP49YGL172W CDC42P19073 191 aa7.26□□□□□ -1.25
NUP49YGL172W RGR1P19263 1082 aa7.26□□□□□ -1.25
NUP49YGL172W PUP1P25043 261 aa7.26□□□□□ -1.25
NUP49YGL172W ADK2P26364 225 aa7.26□□□□□ -1.25
NUP49YGL172W MNR2P35724 969 aa7.26□□□□□ -1.25
NUP49YGL172W EAP1P36041 632 aaKnown RBP7.26□□□□□ -1.25
NUP49YGL172W PXL1P36166 706 aa7.26□□□□□ -1.25
NUP49YGL172W YHR054CP38780 354 aa7.26□□□□□ -1.25
NUP49YGL172W XDJ1P39102 459 aa7.26□□□□□ -1.25
NUP49YGL172W SMC3P47037 1230 aa7.26□□□□□ -1.25
NUP49YGL172W STR2P47164 639 aa7.26□□□□□ -1.25
NUP49YGL172W HST2P53686 357 aa7.26□□□□□ -1.25
NUP49YGL172W EAR1Q03212 550 aa7.26□□□□□ -1.25
NUP49YGL172W STE20Q03497 939 aaKnown RBP7.26□□□□□ -1.25
NUP49YGL172W EMI2Q04409 500 aaKnown RBP7.26□□□□□ -1.25
NUP49YGL172W YPR078CQ06813 372 aa7.26□□□□□ -1.25
NUP49YGL172W ESC8Q08119 714 aa7.26□□□□□ -1.25
NUP49YGL172W PLP2Q12017 286 aa7.26□□□□□ -1.25
NUP49YGL172W IOC2Q12072 812 aa7.26□□□□□ -1.25
NUP49YGL172W ATG9Q12142 997 aa7.26□□□□□ -1.25
NUP49YGL172W RAD59Q12223 238 aa7.26□□□□□ -1.25
NUP49YGL172W PKH2Q12236 1081 aaKnown RBP7.26□□□□□ -1.25
NUP49YGL172W GIS3Q12418 502 aa7.26□□□□□ -1.25
NUP49YGL172W AIR2Q12476 344 aaKnown RBP7.26□□□□□ -1.25
NUP49YGL172W CTF3Q12748 733 aa7.26□□□□□ -1.25
NUP49YGL172W TUP1P16649 713 aa7.25□□□□□ -1.25
NUP49YGL172W KIP1P28742 1111 aa7.25□□□□□ -1.25
NUP49YGL172W MRPL7P36519 292 aa7.25□□□□□ -1.25
NUP49YGL172W TBS1P38114 1094 aa7.25□□□□□ -1.25
NUP49YGL172W APN2P38207 520 aa7.25□□□□□ -1.25
NUP49YGL172W BUD16P39988 312 aa7.25□□□□□ -1.25
NUP49YGL172W SBE2P42223 864 aaKnown RBP7.25□□□□□ -1.25
NUP49YGL172W TAD1P53065 400 aa7.25□□□□□ -1.25
NUP49YGL172W MCM6P53091 1017 aaKnown RBP7.25□□□□□ -1.25
NUP49YGL172W YGR130CP53278 816 aa7.25□□□□□ -1.25
NUP49YGL172W RCR2Q03446 210 aaKnown RBP7.25□□□□□ -1.25
NUP49YGL172W YML083CQ04526 418 aa7.25□□□□□ -1.25
NUP49YGL172W YML082WQ04533 649 aaKnown RBP7.25□□□□□ -1.25
NUP49YGL172W REC8Q12188 680 aa7.25□□□□□ -1.25
NUP49YGL172W UBR2Q07963 1872 aa7.25□□□□□ -1.25
NUP49YGL172W PRC1P00729 532 aa7.24□□□□□ -1.25
NUP49YGL172W SPO12P17123 173 aa7.24□□□□□ -1.25
NUP49YGL172W DAL2P25335 343 aa7.24□□□□□ -1.25
NUP49YGL172W CCL1P37366 393 aa7.24□□□□□ -1.25
NUP49YGL172W YHR202WP38887 602 aa7.24□□□□□ -1.25
NUP49YGL172W KAP123P40069 1113 aaKnown RBP7.24□□□□□ -1.25
NUP49YGL172W SDS3P40505 327 aa7.24□□□□□ -1.25
NUP49YGL172W IES1P43579 692 aa7.24□□□□□ -1.25
NUP49YGL172W ALT1P52893 592 aa7.24□□□□□ -1.25
NUP49YGL172W PNG1Q02890 363 aa7.24□□□□□ -1.25
NUP49YGL172W PPM1Q04081 328 aa7.24□□□□□ -1.25
NUP49YGL172W APL4Q12028 832 aa7.24□□□□□ -1.25
NUP49YGL172W HMI1Q12039 706 aa7.24□□□□□ -1.25
NUP49YGL172W GAL10P04397 699 aa7.23□□□□□ -1.25
NUP49YGL172W SPT2P06843 333 aaPredicted RBP7.23□□□□□ -1.25
NUP49YGL172W PPR1P07272 904 aaPredicted RBP7.23□□□□□ -1.25
NUP49YGL172W COX11P19516 300 aaKnown RBP7.23□□□□□ -1.25
NUP49YGL172W RRP43P25359 394 aaPredicted RBP7.23□□□□□ -1.25
NUP49YGL172W PDC6P26263 563 aaKnown RBP7.23□□□□□ -1.25
NUP49YGL172W CYS3P31373 394 aaKnown RBP7.23□□□□□ -1.25
NUP49YGL172W SMC2P38989 1170 aaKnown RBP7.23□□□□□ -1.25
NUP49YGL172W SAH1P39954 449 aaKnown RBP7.23□□□□□ -1.25
NUP49YGL172W ATG3P40344 310 aa7.23□□□□□ -1.25
NUP49YGL172W MMM1P41800 426 aa7.23□□□□□ -1.25
NUP49YGL172W DRN1P53255 507 aaKnown RBP7.23□□□□□ -1.25
NUP49YGL172W ESBP6P53918 673 aa7.23□□□□□ -1.25
NUP49YGL172W NIS1P53939 407 aa7.23□□□□□ -1.25
NUP49YGL172W STP1Q00947 519 aa7.23□□□□□ -1.25
NUP49YGL172W YPR027CQ12079 277 aa7.23□□□□□ -1.25
NUP49YGL172W MMP1Q12372 583 aa7.23□□□□□ -1.25
NUP49YGL172W CDC33P07260 213 aaKnown RBP7.22□□□□□ -1.25
NUP49YGL172W CYC8P14922 966 aa7.22□□□□□ -1.25
NUP49YGL172W VPS3P23643 1011 aa7.22□□□□□ -1.25
NUP49YGL172W SEC21P32074 935 aaKnown RBP7.22□□□□□ -1.25
NUP49YGL172W EFB1P32471 206 aaKnown RBP7.22□□□□□ -1.25
NUP49YGL172W CSG2P35206 410 aa7.22□□□□□ -1.25
NUP49YGL172W EBP2P36049 427 aaKnown RBP7.22□□□□□ -1.25
NUP49YGL172W JNM1P36224 373 aa7.22□□□□□ -1.25
NUP49YGL172W AGP2P38090 596 aa7.22□□□□□ -1.25
NUP49YGL172W SOL3P38858 249 aa7.22□□□□□ -1.25
NUP49YGL172W FMP10P40098 244 aa7.22□□□□□ -1.25
NUP49YGL172W OSW7P43611 510 aa7.22□□□□□ -1.25
NUP49YGL172W MET13P53128 600 aa7.22□□□□□ -1.25
NUP49YGL172W SPC98P53540 846 aa7.22□□□□□ -1.25
NUP49YGL172W NOP13P53883 403 aaKnown RBP RIP-Chip data7.22□□□□□ -1.25not detected
NUP49YGL172W TIF35Q04067 274 aaKnown RBP7.22□□□□□ -1.25
NUP49YGL172W SDH5Q08230 162 aa7.22□□□□□ -1.25
NUP49YGL172W ECM3Q99252 613 aa7.22□□□□□ -1.25
NUP49YGL172W AI5_BETAQ9ZZX0 354 aa7.22□□□□□ -1.25
NUP49YGL172W HAP2P06774 265 aa7.21□□□□□ -1.25
NUP49YGL172W CHS1P08004 1131 aa7.21□□□□□ -1.25
NUP49YGL172W RNR1P21524 888 aaKnown RBP7.21□□□□□ -1.25
Retrieved 100 of 5,963 RNA–protein pairs in 35.7 ms