RNA–Protein interactions for RNA: YER042W

MXR1, Transcript of Methionine-S-sulfoxide reductase, yeast

Gene MXR1, Length 555 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MXR1	YER042W	HIR1	P32479	840 aa		4.31	□□□□□ -1.72
MXR1	YER042W	ECM1	P39715	212 aa		4.31	□□□□□ -1.72
MXR1	YER042W	PRP31	P49704	494 aa	Predicted RBP	4.31	□□□□□ -1.72
MXR1	YER042W	RTA1	P53047	317 aa		4.31	□□□□□ -1.72
MXR1	YER042W	SMX3	P54999	86 aa	Predicted RBP	4.31	□□□□□ -1.72
MXR1	YER042W	CTK1	Q03957	528 aa	Known RBP	4.31	□□□□□ -1.72
MXR1	YER042W	BNR1	P40450	1375 aa		4.3	□□□□□ -1.72
MXR1	YER042W	YJL206C	P39529	758 aa		4.3	□□□□□ -1.72
MXR1	YER042W	SNM1	P40993	198 aa		4.3	□□□□□ -1.72
MXR1	YER042W	HXT16	P47185	567 aa		4.3	□□□□□ -1.72
MXR1	YER042W	CCT3	P39077	534 aa	Known RBP	4.29	□□□□□ -1.72
MXR1	YER042W	CTR1	P49573	406 aa		4.29	□□□□□ -1.72
MXR1	YER042W	IMO32	P53219	342 aa		4.29	□□□□□ -1.72
MXR1	YER042W	ORC4	P54791	529 aa		4.29	□□□□□ -1.72
MXR1	YER042W	APM1	Q00776	475 aa	Predicted RBP	4.29	□□□□□ -1.72
MXR1	YER042W	COQ11	Q05892	277 aa		4.29	□□□□□ -1.72
MXR1	YER042W	YKL033W-A	Q86ZR7	236 aa		4.29	□□□□□ -1.72
MXR1	YER042W	GLG1	P36143	616 aa		4.28	□□□□□ -1.72
MXR1	YER042W	APT2	P36973	181 aa		4.28	□□□□□ -1.72
MXR1	YER042W	NDC80	P40460	691 aa		4.28	□□□□□ -1.72
MXR1	YER042W	YFL052W	P43551	465 aa		4.28	□□□□□ -1.72
MXR1	YER042W	CDC53	Q12018	815 aa	Known RBP	4.28	□□□□□ -1.72
MXR1	YER042W	YNL162W-A	Q3E7A8	72 aa		4.28	□□□□□ -1.72
MXR1	YER042W	PYC1	P11154	1178 aa	Known RBP	4.27	□□□□□ -1.73
MXR1	YER042W	STI1	P15705	589 aa	Known RBP RIP-Chip data	4.27	□□□□□ -1.73	not detected
MXR1	YER042W	SPO11	P23179	398 aa		4.27	□□□□□ -1.73
MXR1	YER042W	MVD1	P32377	396 aa	Known RBP	4.27	□□□□□ -1.73
MXR1	YER042W	TRZ1	P36159	838 aa	Predicted RBP	4.27	□□□□□ -1.73
MXR1	YER042W	ARG2	P40360	574 aa		4.27	□□□□□ -1.73
MXR1	YER042W	TY4A-J	P47023	414 aa		4.27	□□□□□ -1.73
MXR1	YER042W	ARO10	Q06408	635 aa		4.27	□□□□□ -1.73
MXR1	YER042W	TAF3	Q12297	353 aa		4.27	□□□□□ -1.73
MXR1	YER042W	RPN13	O13563	156 aa		4.26	□□□□□ -1.73
MXR1	YER042W	SIR3	P06701	978 aa		4.26	□□□□□ -1.73
MXR1	YER042W	ADY2	P25613	283 aa		4.26	□□□□□ -1.73
MXR1	YER042W	APL2	P36000	726 aa	Predicted RBP	4.26	□□□□□ -1.73
MXR1	YER042W	YHR112C	P38716	378 aa		4.26	□□□□□ -1.73
MXR1	YER042W	SFB3	P38810	929 aa		4.26	□□□□□ -1.73
MXR1	YER042W	RPN10	P38886	268 aa	Known RBP	4.26	□□□□□ -1.73
MXR1	YER042W	CHZ1	P40019	153 aa	Predicted RBP	4.26	□□□□□ -1.73
MXR1	YER042W	PAN2	P53010	1115 aa	Predicted RBP	4.26	□□□□□ -1.73
MXR1	YER042W	MTL1	P53214	551 aa		4.26	□□□□□ -1.73
MXR1	YER042W	ADE2	P21264	571 aa	Known RBP	4.25	□□□□□ -1.73
MXR1	YER042W	FLO10	P36170	1169 aa		4.25	□□□□□ -1.73
MXR1	YER042W	NUP60	P39705	539 aa		4.25	□□□□□ -1.73
MXR1	YER042W	GDH3	P39708	457 aa		4.25	□□□□□ -1.73
MXR1	YER042W	ARG5,6	Q01217	863 aa		4.25	□□□□□ -1.73
MXR1	YER042W	HOF1	Q05080	669 aa		4.25	□□□□□ -1.73
MXR1	YER042W	YOR131C	Q12486	218 aa		4.25	□□□□□ -1.73
MXR1	YER042W	MTC2	P34246	357 aa		4.24	□□□□□ -1.73
MXR1	YER042W	FMO1	P38866	432 aa		4.24	□□□□□ -1.73
MXR1	YER042W	CCT7	P42943	550 aa	Known RBP	4.24	□□□□□ -1.73
MXR1	YER042W	BNA2	P47125	453 aa		4.24	□□□□□ -1.73
MXR1	YER042W	NPY1	P53164	384 aa		4.24	□□□□□ -1.73
MXR1	YER042W	ATG4	P53867	494 aa		4.24	□□□□□ -1.73
MXR1	YER042W	YDR338C	Q05497	695 aa		4.24	□□□□□ -1.73
MXR1	YER042W	NSE3	Q05541	303 aa		4.24	□□□□□ -1.73
MXR1	YER042W	MCM21	Q06675	368 aa		4.24	□□□□□ -1.73
MXR1	YER042W	CCR4	P31384	837 aa	Known RBP	4.23	□□□□□ -1.73
MXR1	YER042W	STO1	P34160	861 aa	Known RBP	4.23	□□□□□ -1.73
MXR1	YER042W	NNF1	P47149	201 aa		4.23	□□□□□ -1.73
MXR1	YER042W	MDM10	P18409	493 aa		4.22	□□□□□ -1.73
MXR1	YER042W	PHO11	P35842	467 aa		4.22	□□□□□ -1.73
MXR1	YER042W	MCD4	P36051	919 aa		4.22	□□□□□ -1.73
MXR1	YER042W	PHO12	P38693	467 aa		4.22	□□□□□ -1.73
MXR1	YER042W	MIP6	P38760	659 aa	Known RBP	4.22	□□□□□ -1.73
MXR1	YER042W	LYS9	P38999	446 aa		4.22	□□□□□ -1.73
MXR1	YER042W	BDH2	P39713	417 aa		4.22	□□□□□ -1.73
MXR1	YER042W	YEL020C	P39994	560 aa		4.22	□□□□□ -1.73
MXR1	YER042W	REC102	Q02721	264 aa		4.22	□□□□□ -1.73
MXR1	YER042W	THI7	Q05998	598 aa		4.22	□□□□□ -1.73
MXR1	YER042W	ZRT2	Q12436	422 aa		4.22	□□□□□ -1.73
MXR1	YER042W	YLR149C	Q99296	730 aa		4.22	□□□□□ -1.73
MXR1	YER042W	EMP70	P32802	667 aa		4.21	□□□□□ -1.74
MXR1	YER042W	CAF16	P43569	289 aa		4.21	□□□□□ -1.74
MXR1	YER042W	UBC9	P50623	157 aa	Predicted RBP	4.21	□□□□□ -1.74
MXR1	YER042W	AFT2	Q08957	416 aa		4.21	□□□□□ -1.74
MXR1	YER042W	CLF1	Q12309	687 aa	Predicted RBP	4.21	□□□□□ -1.74
MXR1	YER042W	ERG6	P25087	383 aa	Known RBP	4.2	□□□□□ -1.74
MXR1	YER042W	UBS1	P38290	277 aa		4.2	□□□□□ -1.74
MXR1	YER042W	CRP1	P38845	465 aa	Known RBP	4.2	□□□□□ -1.74
MXR1	YER042W	FHN1	P53279	174 aa		4.2	□□□□□ -1.74
MXR1	YER042W	SNP1	Q00916	300 aa	Predicted RBP	4.2	□□□□□ -1.74
MXR1	YER042W	DIA2	Q08496	732 aa	Predicted RBP	4.2	□□□□□ -1.74
MXR1	YER042W	HRP1	Q99383	534 aa	Known RBP	4.2	□□□□□ -1.74
MXR1	YER042W	Q0142	Q9ZZW4	58 aa		4.2	□□□□□ -1.74
MXR1	YER042W	GSY1	P23337	708 aa		4.19	□□□□□ -1.74
MXR1	YER042W	SRP40	P32583	406 aa	Predicted RBP	4.19	□□□□□ -1.74
MXR1	YER042W	RPN7	Q06103	429 aa	Known RBP	4.19	□□□□□ -1.74
MXR1	YER042W	MLH3	Q12083	715 aa		4.19	□□□□□ -1.74
MXR1	YER042W	ERR1	P0CX10	437 aa		4.18	□□□□□ -1.74
MXR1	YER042W	ERR2	P0CX11	437 aa		4.18	□□□□□ -1.74
MXR1	YER042W	HSL7	P38274	827 aa		4.18	□□□□□ -1.74
MXR1	YER042W	HRB1	P38922	454 aa	Known RBP RIP-Chip data	4.18	□□□□□ -1.74	not detected
MXR1	YER042W	PAC2	P39937	518 aa		4.18	□□□□□ -1.74
MXR1	YER042W	NHX1	Q04121	633 aa		4.18	□□□□□ -1.74
MXR1	YER042W	CDC9	P04819	755 aa		4.17	□□□□□ -1.74
MXR1	YER042W	RNR1	P21524	888 aa	Known RBP	4.17	□□□□□ -1.74
MXR1	YER042W	PEX1	P24004	1043 aa		4.17	□□□□□ -1.74
MXR1	YER042W	ORC2	P32833	620 aa		4.17	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 14.1 ms