RNA–Protein interactions for RNA: YCR083W

TRX3, Transcript of Mitochondrial thioredoxin, yeast

Gene TRX3, Length 384 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TRX3	YCR083W	MSH4	P40965	878 aa	Predicted RBP	4.09	□□□□□ -1.75
TRX3	YCR083W	CTH1	P47976	325 aa		4.09	□□□□□ -1.75
TRX3	YCR083W	UBX2	Q04228	584 aa		4.09	□□□□□ -1.75
TRX3	YCR083W	POB3	Q04636	552 aa	Known RBP	4.09	□□□□□ -1.75
TRX3	YCR083W	MRD1	Q06106	887 aa	Known RBP	4.09	□□□□□ -1.75
TRX3	YCR083W	YDL124W	Q07551	312 aa	Known RBP	4.09	□□□□□ -1.75
TRX3	YCR083W	YPL260W	Q08977	551 aa		4.09	□□□□□ -1.75
TRX3	YCR083W	TY1A-NL1	Q12391	440 aa	Known RBP	4.09	□□□□□ -1.75
TRX3	YCR083W	YOR111W	Q99210	232 aa		4.09	□□□□□ -1.75
TRX3	YCR083W	GSC2	P40989	1895 aa		4.09	□□□□□ -1.76
TRX3	YCR083W	MCM3	P24279	971 aa	Known RBP	4.08	□□□□□ -1.76
TRX3	YCR083W	SMY2	P32909	740 aa	Known RBP	4.08	□□□□□ -1.76
TRX3	YCR083W	MDL2	P33311	773 aa		4.08	□□□□□ -1.76
TRX3	YCR083W	NNK1	P36003	928 aa		4.08	□□□□□ -1.76
TRX3	YCR083W	RXT2	P38255	430 aa		4.08	□□□□□ -1.76
TRX3	YCR083W	TOS1	P38288	455 aa		4.08	□□□□□ -1.76
TRX3	YCR083W	TCD1	P38756	429 aa		4.08	□□□□□ -1.76
TRX3	YCR083W	RTS1	P38903	757 aa		4.08	□□□□□ -1.76
TRX3	YCR083W	NOC2	P39744	710 aa	Known RBP	4.08	□□□□□ -1.76
TRX3	YCR083W	CSM2	P40465	213 aa		4.08	□□□□□ -1.76
TRX3	YCR083W	TFG2	P41896	400 aa	Predicted RBP	4.08	□□□□□ -1.76
TRX3	YCR083W	YJL045W	P47052	634 aa		4.08	□□□□□ -1.76
TRX3	YCR083W	RTA1	P53047	317 aa		4.08	□□□□□ -1.76
TRX3	YCR083W	UTP8	P53276	713 aa	Known RBP	4.08	□□□□□ -1.76
TRX3	YCR083W	TPO2	P53283	614 aa		4.08	□□□□□ -1.76
TRX3	YCR083W	NCE103	P53615	221 aa		4.08	□□□□□ -1.76
TRX3	YCR083W	TPP1	Q03796	238 aa		4.08	□□□□□ -1.76
TRX3	YCR083W	HRK1	Q08732	759 aa	Known RBP	4.08	□□□□□ -1.76
TRX3	YCR083W	PSF3	Q12146	194 aa		4.08	□□□□□ -1.76
TRX3	YCR083W	FKS1	P38631	1876 aa	Known RBP	4.07	□□□□□ -1.76
TRX3	YCR083W	HIS4	P00815	799 aa	Known RBP	4.07	□□□□□ -1.76
TRX3	YCR083W	SNF3	P10870	884 aa		4.07	□□□□□ -1.76
TRX3	YCR083W	VPS1	P21576	704 aa	Known RBP	4.07	□□□□□ -1.76
TRX3	YCR083W	MAK31	P23059	88 aa		4.07	□□□□□ -1.76
TRX3	YCR083W	RIT1	P23796	513 aa		4.07	□□□□□ -1.76
TRX3	YCR083W	LCB1	P25045	558 aa	Known RBP	4.07	□□□□□ -1.76
TRX3	YCR083W	CDC15	P27636	974 aa		4.07	□□□□□ -1.76
TRX3	YCR083W	KRE2	P27809	442 aa		4.07	□□□□□ -1.76
TRX3	YCR083W	BMH1	P29311	267 aa	Known RBP	4.07	□□□□□ -1.76
TRX3	YCR083W	AAR2	P32357	355 aa	Predicted RBP	4.07	□□□□□ -1.76
TRX3	YCR083W	SPC110	P32380	944 aa		4.07	□□□□□ -1.76
TRX3	YCR083W	FRD1	P32614	470 aa	Known RBP	4.07	□□□□□ -1.76
TRX3	YCR083W	BET3	P36149	193 aa		4.07	□□□□□ -1.76
TRX3	YCR083W	YBR284W	P38150	797 aa		4.07	□□□□□ -1.76
TRX3	YCR083W	MAL31	P38156	614 aa		4.07	□□□□□ -1.76
TRX3	YCR083W	CEP3	P40969	608 aa		4.07	□□□□□ -1.76
TRX3	YCR083W	YFH7	P43591	353 aa		4.07	□□□□□ -1.76
TRX3	YCR083W	LSB3	P43603	459 aa	Known RBP	4.07	□□□□□ -1.76
TRX3	YCR083W	ALG2	P43636	503 aa		4.07	□□□□□ -1.76
TRX3	YCR083W	LYS4	P49367	693 aa	Predicted RBP	4.07	□□□□□ -1.76
TRX3	YCR083W	PIP2	P52960	996 aa		4.07	□□□□□ -1.76
TRX3	YCR083W	VPS75	P53853	264 aa		4.07	□□□□□ -1.76
TRX3	YCR083W	MYO5	Q04439	1219 aa	Known RBP	4.07	□□□□□ -1.76
TRX3	YCR083W	GFD1	Q04839	188 aa	Known RBP	4.07	□□□□□ -1.76
TRX3	YCR083W	HCR1	Q05775	265 aa	Known RBP	4.07	□□□□□ -1.76
TRX3	YCR083W	DUS3	Q06053	668 aa	Known RBP	4.07	□□□□□ -1.76
TRX3	YCR083W	COG4	Q06096	861 aa		4.07	□□□□□ -1.76
TRX3	YCR083W	IRC3	Q06683	689 aa		4.07	□□□□□ -1.76
TRX3	YCR083W	THI72	Q08579	599 aa		4.07	□□□□□ -1.76
TRX3	YCR083W	TMA16	Q08687	178 aa		4.07	□□□□□ -1.76
TRX3	YCR083W	SFI1	Q12369	946 aa		4.07	□□□□□ -1.76
TRX3	YCR083W	YGR161W-C	Q3E744	92 aa		4.07	□□□□□ -1.76
TRX3	YCR083W	RAD61	Q99359	647 aa		4.07	□□□□□ -1.76
TRX3	YCR083W	TOM70	P07213	617 aa	Known RBP	4.06	□□□□□ -1.76
TRX3	YCR083W	RPL11A	P0C0W9	174 aa	Known RBP	4.06	□□□□□ -1.76
TRX3	YCR083W	ALG1	P16661	449 aa		4.06	□□□□□ -1.76
TRX3	YCR083W	PHO13	P19881	312 aa		4.06	□□□□□ -1.76
TRX3	YCR083W	PRO3	P32263	286 aa	Known RBP	4.06	□□□□□ -1.76
TRX3	YCR083W	SAC6	P32599	642 aa	Known RBP	4.06	□□□□□ -1.76
TRX3	YCR083W	ADE17	P38009	592 aa	Known RBP	4.06	□□□□□ -1.76
TRX3	YCR083W	PFF1	P38244	976 aa		4.06	□□□□□ -1.76
TRX3	YCR083W	MXR1	P40029	184 aa		4.06	□□□□□ -1.76
TRX3	YCR083W	PCI8	P40512	444 aa		4.06	□□□□□ -1.76
TRX3	YCR083W	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	4.06	□□□□□ -1.76	not detected
TRX3	YCR083W	YJR142W	P47173	342 aa		4.06	□□□□□ -1.76
TRX3	YCR083W	YGR153W	P48238	217 aa		4.06	□□□□□ -1.76
TRX3	YCR083W	BUD9	P53226	547 aa		4.06	□□□□□ -1.76
TRX3	YCR083W	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	4.06	□□□□□ -1.76	RIP-Chip
TRX3	YCR083W	MMR1	Q06324	491 aa		4.06	□□□□□ -1.76
TRX3	YCR083W	TDA6	Q06466	467 aa		4.06	□□□□□ -1.76
TRX3	YCR083W	YCG1	Q06680	1035 aa		4.06	□□□□□ -1.76
TRX3	YCR083W	APL4	Q12028	832 aa		4.06	□□□□□ -1.76
TRX3	YCR083W	CEX1	Q12453	761 aa		4.06	□□□□□ -1.76
TRX3	YCR083W	RPL11B	Q3E757	174 aa	Predicted RBP	4.06	□□□□□ -1.76
TRX3	YCR083W	NBL1	Q3E7Y6	73 aa		4.06	□□□□□ -1.76
TRX3	YCR083W	PET111	P08468	800 aa		4.05	□□□□□ -1.76
TRX3	YCR083W	RPS4A	P0CX35	261 aa	Known RBP	4.05	□□□□□ -1.76
TRX3	YCR083W	RPS4B	P0CX36	261 aa	Known RBP	4.05	□□□□□ -1.76
TRX3	YCR083W	CAF20	P12962	161 aa	Known RBP	4.05	□□□□□ -1.76
TRX3	YCR083W	TOP3	P13099	656 aa		4.05	□□□□□ -1.76
TRX3	YCR083W	DBP2	P24783	546 aa	Known RBP	4.05	□□□□□ -1.76
TRX3	YCR083W	RSC6	P25632	483 aa		4.05	□□□□□ -1.76
TRX3	YCR083W	SMY1	P32364	656 aa	Known RBP	4.05	□□□□□ -1.76
TRX3	YCR083W	CDC11	P32458	415 aa		4.05	□□□□□ -1.76
TRX3	YCR083W	HBS1	P32769	611 aa	Known RBP	4.05	□□□□□ -1.76
TRX3	YCR083W	PXL1	P36166	706 aa		4.05	□□□□□ -1.76
TRX3	YCR083W	VID27	P40157	782 aa		4.05	□□□□□ -1.76
TRX3	YCR083W	PRY1	P47032	299 aa		4.05	□□□□□ -1.76
TRX3	YCR083W	YGL138C	P53122	345 aa		4.05	□□□□□ -1.76
TRX3	YCR083W	RPT6	Q01939	405 aa	Known RBP	4.05	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 28.4 ms