RNA–Protein interactions for RNA: YBL041W

PRE7, Transcript of Beta 6 subunit of the 20S proteasome, yeastyeast

Gene PRE7, Length 726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE7YBL041W SHP1P34223 423 aa5.82□□□□□ -1.48
PRE7YBL041W ADD66P36040 267 aa5.82□□□□□ -1.48
PRE7YBL041W MCR1P36060 302 aaKnown RBP5.82□□□□□ -1.48
PRE7YBL041W PIC2P40035 300 aa5.82□□□□□ -1.48
PRE7YBL041W ALG2P43636 503 aa5.82□□□□□ -1.48
PRE7YBL041W VPS53P47061 822 aa5.82□□□□□ -1.48
PRE7YBL041W LSB1P53281 241 aa5.82□□□□□ -1.48
PRE7YBL041W SLD5Q03406 294 aa5.82□□□□□ -1.48
PRE7YBL041W TFC6Q06339 672 aa5.82□□□□□ -1.48
PRE7YBL041W MSC6Q08818 692 aaKnown RBP5.82□□□□□ -1.48
PRE7YBL041W ERP3Q12403 225 aa5.82□□□□□ -1.48
PRE7YBL041W MYO1P08964 1928 aa5.82□□□□□ -1.48
PRE7YBL041W SOD2P00447 233 aa5.81□□□□□ -1.48
PRE7YBL041W TKL1P23254 680 aaKnown RBP5.81□□□□□ -1.48
PRE7YBL041W YUR1P26725 428 aa5.81□□□□□ -1.48
PRE7YBL041W PEP3P27801 918 aa5.81□□□□□ -1.48
PRE7YBL041W MCM4P30665 933 aaKnown RBP5.81□□□□□ -1.48
PRE7YBL041W IMP2'P32351 346 aa5.81□□□□□ -1.48
PRE7YBL041W SEC8P32855 1065 aa5.81□□□□□ -1.48
PRE7YBL041W TFC4P33339 1025 aa5.81□□□□□ -1.48
PRE7YBL041W DBP7P36120 742 aaKnown RBP5.81□□□□□ -1.48
PRE7YBL041W ATG14P38270 344 aa5.81□□□□□ -1.48
PRE7YBL041W NOC2P39744 710 aaKnown RBP5.81□□□□□ -1.48
PRE7YBL041W CSM2P40465 213 aa5.81□□□□□ -1.48
PRE7YBL041W SUE1Q06524 206 aa5.81□□□□□ -1.48
PRE7YBL041W RSC58Q07979 502 aa5.81□□□□□ -1.48
PRE7YBL041W TY1B-AO13527 1196 aaKnown RBP5.8□□□□□ -1.48
PRE7YBL041W HXK1P04806 485 aaKnown RBP5.8□□□□□ -1.48
PRE7YBL041W RPS13P05756 151 aaKnown RBP5.8□□□□□ -1.48
PRE7YBL041W POX1P13711 748 aa5.8□□□□□ -1.48
PRE7YBL041W SKP2P42843 763 aa5.8□□□□□ -1.48
PRE7YBL041W LIF1P53150 421 aa5.8□□□□□ -1.48
PRE7YBL041W SNO2P53823 222 aa5.8□□□□□ -1.48
PRE7YBL041W MDM1Q01846 1127 aa5.8□□□□□ -1.48
PRE7YBL041W YVH1Q02256 364 aaKnown RBP5.8□□□□□ -1.48
PRE7YBL041W YMR321CQ04898 105 aa5.8□□□□□ -1.48
PRE7YBL041W EST2Q06163 884 aa5.8□□□□□ -1.48
PRE7YBL041W ISA1Q07821 250 aaPredicted RBP5.8□□□□□ -1.48
PRE7YBL041W TRM11Q12463 433 aa5.8□□□□□ -1.48
PRE7YBL041W PHR1P05066 565 aaKnown RBP RIP-Chip data5.79□□□□□ -1.48not detected
PRE7YBL041W HEM1P09950 548 aaPredicted RBP5.79□□□□□ -1.48
PRE7YBL041W RNR3P21672 869 aaKnown RBP5.79□□□□□ -1.48
PRE7YBL041W KIP1P28742 1111 aa5.79□□□□□ -1.48
PRE7YBL041W RPT1P33299 467 aaKnown RBP5.79□□□□□ -1.48
PRE7YBL041W BRN1P38170 754 aa5.79□□□□□ -1.48
PRE7YBL041W REG2P38232 338 aa5.79□□□□□ -1.48
PRE7YBL041W FMS1P50264 508 aa5.79□□□□□ -1.48
PRE7YBL041W SCS3P53012 380 aa5.79□□□□□ -1.48
PRE7YBL041W YGL039WP53183 348 aaKnown RBP5.79□□□□□ -1.48
PRE7YBL041W UBP3Q01477 912 aaKnown RBP RIP-Chip data5.79□□□□□ -1.48not detected
PRE7YBL041W HDA2Q06629 674 aa5.79□□□□□ -1.48
PRE7YBL041W DSE3Q08729 430 aa5.79□□□□□ -1.48
PRE7YBL041W RKM4Q12504 494 aa5.79□□□□□ -1.48
PRE7YBL041W YOR111WQ99210 232 aa5.79□□□□□ -1.48
PRE7YBL041W MOT1P32333 1867 aa5.79□□□□□ -1.48
PRE7YBL041W DED1P06634 604 aaKnown RBP5.78□□□□□ -1.48
PRE7YBL041W RPL8AP17076 256 aaKnown RBP5.78□□□□□ -1.48
PRE7YBL041W NDT80P38830 627 aa5.78□□□□□ -1.48
PRE7YBL041W TPM2P40414 161 aa5.78□□□□□ -1.48
PRE7YBL041W SPO22P40511 975 aa5.78□□□□□ -1.48
PRE7YBL041W FOL2P51601 243 aaKnown RBP5.78□□□□□ -1.48
PRE7YBL041W DAK1P54838 584 aaKnown RBP5.78□□□□□ -1.48
PRE7YBL041W PTA1Q01329 785 aaPredicted RBP5.78□□□□□ -1.48
PRE7YBL041W YDR132CQ03900 495 aa5.78□□□□□ -1.48
PRE7YBL041W VIP1Q06685 1146 aaKnown RBP5.78□□□□□ -1.48
PRE7YBL041W OXR1Q08952 273 aa5.78□□□□□ -1.48
PRE7YBL041W PGA3Q12746 312 aaKnown RBP5.78□□□□□ -1.48
PRE7YBL041W RTP1Q12751 981 aa5.78□□□□□ -1.48
PRE7YBL041W SNA3P14359 133 aa5.77□□□□□ -1.49
PRE7YBL041W HXT17P53631 564 aa5.77□□□□□ -1.49
PRE7YBL041W ESF1Q06344 628 aaKnown RBP5.77□□□□□ -1.49
PRE7YBL041W SPS1P08458 490 aa5.76□□□□□ -1.49
PRE7YBL041W PWP2P25635 923 aaKnown RBP5.76□□□□□ -1.49
PRE7YBL041W ALG3P38179 458 aa5.76□□□□□ -1.49
PRE7YBL041W PTC5Q12511 572 aa5.76□□□□□ -1.49
PRE7YBL041W YDR524C-BQ3E6R4 66 aa5.76□□□□□ -1.49
PRE7YBL041W CIT1P00890 479 aa5.75□□□□□ -1.49
PRE7YBL041W SNF5P18480 905 aa5.75□□□□□ -1.49
PRE7YBL041W ABZ1P37254 787 aaPredicted RBP5.75□□□□□ -1.49
PRE7YBL041W HXT13P39924 564 aa5.75□□□□□ -1.49
PRE7YBL041W CTR1P49573 406 aa5.75□□□□□ -1.49
PRE7YBL041W ASE1P50275 885 aa5.75□□□□□ -1.49
PRE7YBL041W YML020WQ03722 664 aa5.75□□□□□ -1.49
PRE7YBL041W YDR341CQ05506 607 aaKnown RBP5.75□□□□□ -1.49
PRE7YBL041W AHC1Q12433 566 aa5.75□□□□□ -1.49
PRE7YBL041W UBR2Q07963 1872 aa5.75□□□□□ -1.49
PRE7YBL041W MAS2P11914 482 aa5.74□□□□□ -1.49
PRE7YBL041W BAP2P38084 609 aa5.74□□□□□ -1.49
PRE7YBL041W CCT3P39077 534 aaKnown RBP5.74□□□□□ -1.49
PRE7YBL041W HMF1P40037 129 aaKnown RBP5.74□□□□□ -1.49
PRE7YBL041W YFL054CP43549 646 aa5.74□□□□□ -1.49
PRE7YBL041W ROD1Q02805 837 aa5.74□□□□□ -1.49
PRE7YBL041W MSC2Q03455 724 aa5.74□□□□□ -1.49
PRE7YBL041W CLU1Q03690 1277 aaKnown RBP5.74□□□□□ -1.49
PRE7YBL041W SPO21Q12411 609 aa5.74□□□□□ -1.49
PRE7YBL041W SES1P07284 462 aaKnown RBP5.73□□□□□ -1.49
PRE7YBL041W POT1P27796 417 aaKnown RBP RIP-Chip data5.73□□□□□ -1.49not detected
PRE7YBL041W CTS1P29029 562 aa5.73□□□□□ -1.49
PRE7YBL041W OPY1P38271 328 aa5.73□□□□□ -1.49
PRE7YBL041W SUL1P38359 859 aa5.73□□□□□ -1.49
Retrieved 100 of 5,963 RNA–protein pairs in 14.1 ms