RNA–Protein interactions for RNA: ENSMUST00000050178.12

Ccdc60-201, Transcript of Coiled-coil domain-containing protein 60, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc60, Length 3,522 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60-201ENSMUST00000050178 Nup188Q6ZQH8 1759 aa9.53□□□□□ -0.88
Ccdc60-201ENSMUST00000050178 DaxxO35613 739 aa9.53□□□□□ -0.88
Ccdc60-201ENSMUST00000050178 Jmjd4Q8BFT6 427 aa9.53□□□□□ -0.88
Ccdc60-201ENSMUST00000050178 Atad2Q8CDM1 1040 aa9.53□□□□□ -0.88
Ccdc60-201ENSMUST00000050178 Smc4Q8CG47 1286 aa9.53□□□□□ -0.88
Ccdc60-201ENSMUST00000050178 Plcd4Q8K3R3 807 aa9.53□□□□□ -0.88
Ccdc60-201ENSMUST00000050178 ApobrQ8VBT6 942 aa9.53□□□□□ -0.88
Ccdc60-201ENSMUST00000050178 StrcQ8VIM6 1809 aa9.53□□□□□ -0.88
Ccdc60-201ENSMUST00000050178 Prr5lA2AVJ5 370 aa9.53□□□□□ -0.88
Ccdc60-201ENSMUST00000050178 TsksO54887 585 aa9.53□□□□□ -0.88
Ccdc60-201ENSMUST00000050178 Ctdnep1Q3TP92 244 aa9.53□□□□□ -0.88
Ccdc60-201ENSMUST00000050178 Erc1Q99MI1 1120 aa9.53□□□□□ -0.88
Ccdc60-201ENSMUST00000050178 Usp42B2RQC2 1324 aaKnown RBP9.53□□□□□ -0.88
Ccdc60-201ENSMUST00000050178 Sept1P42209 366 aa9.52□□□□□ -0.88
Ccdc60-201ENSMUST00000050178 Gpr182P43142 395 aa9.52□□□□□ -0.88
Ccdc60-201ENSMUST00000050178 Snai1Q02085 264 aa9.52□□□□□ -0.88
Ccdc60-201ENSMUST00000050178 Abtb2Q7TQI7 1024 aa9.52□□□□□ -0.88
Ccdc60-201ENSMUST00000050178 LratQ9JI60 231 aa9.52□□□□□ -0.88
Ccdc60-201ENSMUST00000050178 Setdb1O88974 1307 aa9.52□□□□□ -0.89
Ccdc60-201ENSMUST00000050178 Psme4Q5SSW2 1843 aa9.52□□□□□ -0.89
Ccdc60-201ENSMUST00000050178 Phactr2B1AVP0 632 aa9.52□□□□□ -0.89
Ccdc60-201ENSMUST00000050178 Cyp2d34L7N463 504 aa9.52□□□□□ -0.89
Ccdc60-201ENSMUST00000050178 Stk11ipQ3TAA7 1072 aa9.52□□□□□ -0.89
Ccdc60-201ENSMUST00000050178 Plbd2Q3TCN2 594 aa9.52□□□□□ -0.89
Ccdc60-201ENSMUST00000050178 Q9D9S1 216 aa9.52□□□□□ -0.89
Ccdc60-201ENSMUST00000050178 Stx6Q9JKK1 255 aa9.52□□□□□ -0.89
Ccdc60-201ENSMUST00000050178 CoblQ5NBX1 1337 aaKnown RBP9.52□□□□□ -0.89
Ccdc60-201ENSMUST00000050178 Myh6Q02566 1938 aaKnown RBP9.52□□□□□ -0.89
Ccdc60-201ENSMUST00000050178 Scn9aQ62205 1984 aa9.52□□□□□ -0.89
Ccdc60-201ENSMUST00000050178 Tsc2Q61037 1814 aa9.52□□□□□ -0.89
Ccdc60-201ENSMUST00000050178 Hspd1P63038 573 aaKnown RBP9.52□□□□□ -0.89
Ccdc60-201ENSMUST00000050178 Exoc5Q3TPX4 708 aa9.52□□□□□ -0.89
Ccdc60-201ENSMUST00000050178 Ncoa5Q91W39 579 aaKnown RBP9.52□□□□□ -0.89
Ccdc60-201ENSMUST00000050178 Col5a2Q3U962 1497 aa9.51□□□□□ -0.89
Ccdc60-201ENSMUST00000050178 4930523C07RikE9Q2T4 99 aa9.51□□□□□ -0.89
Ccdc60-201ENSMUST00000050178 Pald1P70261 859 aa9.51□□□□□ -0.89
Ccdc60-201ENSMUST00000050178 Rnf20Q5DTM8 973 aa9.51□□□□□ -0.89
Ccdc60-201ENSMUST00000050178 Smg7Q5RJH6 1138 aaKnown RBP9.51□□□□□ -0.89
Ccdc60-201ENSMUST00000050178 Ppp1r10Q80W00 888 aaKnown RBP9.51□□□□□ -0.89
Ccdc60-201ENSMUST00000050178 Rcan1Q9JHG6 198 aa9.51□□□□□ -0.89
Ccdc60-201ENSMUST00000050178 TrdnE9Q9K5 693 aa9.51□□□□□ -0.89
Ccdc60-201ENSMUST00000050178 Q8C5K5 320 aa9.51□□□□□ -0.89
Ccdc60-201ENSMUST00000050178 Ttc14Q9CSP9 761 aa9.51□□□□□ -0.89
Ccdc60-201ENSMUST00000050178 4931400O07RikQ9D4M5 137 aa9.51□□□□□ -0.89
Ccdc60-201ENSMUST00000050178 Leo1Q5XJE5 667 aa9.51□□□□□ -0.89
Ccdc60-201ENSMUST00000050178 Tex2Q6ZPJ0 1128 aaKnown RBP9.51□□□□□ -0.89
Ccdc60-201ENSMUST00000050178 Kdm4aQ8BW72 1064 aa9.51□□□□□ -0.89
Ccdc60-201ENSMUST00000050178 Polr3dQ91WD1 398 aa9.51□□□□□ -0.89
Ccdc60-201ENSMUST00000050178 Irx6Q9ER75 438 aa9.51□□□□□ -0.89
Ccdc60-201ENSMUST00000050178 Ccne2Q9Z238 404 aa9.51□□□□□ -0.89
Ccdc60-201ENSMUST00000050178 Timm10P62073 90 aa9.5□□□□□ -0.89
Ccdc60-201ENSMUST00000050178 Tmem109Q3UBX0 243 aa9.5□□□□□ -0.89
Ccdc60-201ENSMUST00000050178 Edrf1Q6GQV7 1239 aa9.5□□□□□ -0.89
Ccdc60-201ENSMUST00000050178 Lrrfip2Q91WK0 415 aa9.5□□□□□ -0.89
Ccdc60-201ENSMUST00000050178 TnksQ6PFX9 1320 aa9.5□□□□□ -0.89
Ccdc60-201ENSMUST00000050178 Pde8bE9Q4S1 865 aa9.5□□□□□ -0.89
Ccdc60-201ENSMUST00000050178 ArxO35085 564 aa9.5□□□□□ -0.89
Ccdc60-201ENSMUST00000050178 Cops6O88545 324 aa9.5□□□□□ -0.89
Ccdc60-201ENSMUST00000050178 Irx3P81067 507 aa9.5□□□□□ -0.89
Ccdc60-201ENSMUST00000050178 Clcn1Q64347 994 aa9.5□□□□□ -0.89
Ccdc60-201ENSMUST00000050178 Ncaph2Q8BSP2 607 aa9.5□□□□□ -0.89
Ccdc60-201ENSMUST00000050178 Nip7Q9CXK8 180 aaKnown RBP9.5□□□□□ -0.89
Ccdc60-201ENSMUST00000050178 Prl3d1P18121 224 aa9.49□□□□□ -0.89
Ccdc60-201ENSMUST00000050178 Cep63Q3UPP8 700 aa9.49□□□□□ -0.89
Ccdc60-201ENSMUST00000050178 Jarid2Q62315 1234 aa9.49□□□□□ -0.89
Ccdc60-201ENSMUST00000050178 Bms1Q6PGF5 1284 aaKnown RBP9.49□□□□□ -0.89
Ccdc60-201ENSMUST00000050178 Ankib1Q6ZPS6 1085 aa9.49□□□□□ -0.89
Ccdc60-201ENSMUST00000050178 SrrtQ99MR6 875 aaKnown RBP9.49□□□□□ -0.89
Ccdc60-201ENSMUST00000050178 Bloc1s2Q9CWG9 143 aa9.49□□□□□ -0.89
Ccdc60-201ENSMUST00000050178 Frmd7A2AD83 703 aa9.49□□□□□ -0.89
Ccdc60-201ENSMUST00000050178 Rgs9O54828 675 aa9.49□□□□□ -0.89
Ccdc60-201ENSMUST00000050178 Fam160b2Q80YR2 744 aa9.49□□□□□ -0.89
Ccdc60-201ENSMUST00000050178 Pof1bQ8K4L4 587 aa9.49□□□□□ -0.89
Ccdc60-201ENSMUST00000050178 Pus3Q9JI38 481 aa9.49□□□□□ -0.89
Ccdc60-201ENSMUST00000050178 Nrxn2E9Q7X7 1710 aa9.49□□□□□ -0.89
Ccdc60-201ENSMUST00000050178 Cyp2d9P11714 504 aa9.48□□□□□ -0.89
Ccdc60-201ENSMUST00000050178 Susd4Q8BH32 490 aa9.48□□□□□ -0.89
Ccdc60-201ENSMUST00000050178 Zkscan8Q8BSL0 588 aa9.48□□□□□ -0.89
Ccdc60-201ENSMUST00000050178 Nlrp3Q8R4B8 1033 aa9.48□□□□□ -0.89
Ccdc60-201ENSMUST00000050178 Appbp2Q9DAX9 585 aa9.48□□□□□ -0.89
Ccdc60-201ENSMUST00000050178 Hap1O35668 628 aa9.48□□□□□ -0.89
Ccdc60-201ENSMUST00000050178 Gadd45bP22339 160 aa9.48□□□□□ -0.89
Ccdc60-201ENSMUST00000050178 HdlbpQ8VDJ3 1268 aaKnown RBP9.48□□□□□ -0.89
Ccdc60-201ENSMUST00000050178 Gpr108Q91WD0 569 aa9.48□□□□□ -0.89
Ccdc60-201ENSMUST00000050178 Sf3b3Q921M3 1217 aaKnown RBP9.48□□□□□ -0.89
Ccdc60-201ENSMUST00000050178 BrapQ99MP8 591 aa9.48□□□□□ -0.89
Ccdc60-201ENSMUST00000050178 Rgs12Q8CGE9 1381 aa9.48□□□□□ -0.89
Ccdc60-201ENSMUST00000050178 Frmpd3A0A140LIW3 1774 aa9.48□□□□□ -0.89
Ccdc60-201ENSMUST00000050178 Qtrt2B8ZXI1 415 aa9.48□□□□□ -0.89
Ccdc60-201ENSMUST00000050178 Bin2D3Z6Q9 489 aa9.48□□□□□ -0.89
Ccdc60-201ENSMUST00000050178 Prl7a2O54831 253 aa9.48□□□□□ -0.89
Ccdc60-201ENSMUST00000050178 Ube2hP62257 183 aa9.48□□□□□ -0.89
Ccdc60-201ENSMUST00000050178 Ddx46Q569Z5 1032 aaKnown RBP9.48□□□□□ -0.89
Ccdc60-201ENSMUST00000050178 Sptlc3Q8BG54 563 aa9.48□□□□□ -0.89
Ccdc60-201ENSMUST00000050178 Rrs1Q9CYH6 365 aaKnown RBP9.48□□□□□ -0.89
Ccdc60-201ENSMUST00000050178 Igbp1bQ9QZ29 343 aa9.48□□□□□ -0.89
Ccdc60-201ENSMUST00000050178 Myo3bQ1EG27 1305 aa9.47□□□□□ -0.89
Ccdc60-201ENSMUST00000050178 Gm4340L7N2C4 268 aa9.47□□□□□ -0.89
Ccdc60-201ENSMUST00000050178 Casp12O08736 419 aa9.47□□□□□ -0.89
Ccdc60-201ENSMUST00000050178 Plcb2A3KGF7 1181 aa9.47□□□□□ -0.89
Retrieved 100 of 22,080 RNA–protein pairs in 13.7 ms