RNA–Protein interactions for RNA: ENSMUST00000050178.12

Ccdc60-201, Transcript of Coiled-coil domain-containing protein 60, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc60, Length 3,522 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60-201ENSMUST00000050178 Gm35339A0A140LHH9 1649 aa17.59■□□□□ 0.41
Ccdc60-201ENSMUST00000050178 NischQ80TM9 1593 aa16.71■□□□□ 0.27
Ccdc60-201ENSMUST00000050178 Abcc9P70170 1546 aa16.41■□□□□ 0.22
Ccdc60-201ENSMUST00000050178 Abcc8B2RUS7 1588 aa16.06■□□□□ 0.16
Ccdc60-201ENSMUST00000050178 ScribQ80U72 1612 aa15.47■□□□□ 0.07
Ccdc60-201ENSMUST00000050178 Dcaf1Q80TR8 1506 aa15.29■□□□□ 0.04
Ccdc60-201ENSMUST00000050178 Ccdc180J3QNE4 1664 aa15.2■□□□□ 0.02
Ccdc60-201ENSMUST00000050178 Rtl1Q7M732 1744 aa15.13■□□□□ 0.01
Ccdc60-201ENSMUST00000050178 NacadQ5SWP3 1504 aa14.91□□□□□ -0.02
Ccdc60-201ENSMUST00000050178 Kdm5dQ62240 1548 aa14.72□□□□□ -0.05
Ccdc60-201ENSMUST00000050178 Crybg2B7ZCC2 1516 aa14.64□□□□□ -0.07
Ccdc60-201ENSMUST00000050178 Sycp2Q9CUU3 1500 aa14.64□□□□□ -0.07
Ccdc60-201ENSMUST00000050178 Rb1cc1Q9ESK9 1588 aa14.62□□□□□ -0.07
Ccdc60-201ENSMUST00000050178 Zcchc6Q5BLK4 1491 aaKnown RBP14.58□□□□□ -0.08
Ccdc60-201ENSMUST00000050178 Baz1aO88379 1555 aa14.54□□□□□ -0.08
Ccdc60-201ENSMUST00000050178 BicraF8VPZ9 1578 aa14.43□□□□□ -0.1
Ccdc60-201ENSMUST00000050178 Baz1bQ9Z277 1479 aa14.42□□□□□ -0.1
Ccdc60-201ENSMUST00000050178 Rhox8Q6VSS7 320 aa14.39□□□□□ -0.11
Ccdc60-201ENSMUST00000050178 Smarca2Q6DIC0 1577 aa14.27□□□□□ -0.13
Ccdc60-201ENSMUST00000050178 Thoc2B1AZI6 1594 aaKnown RBP14.2□□□□□ -0.14
Ccdc60-201ENSMUST00000050178 Pds5bQ4VA53 1446 aaKnown RBP13.89□□□□□ -0.19
Ccdc60-201ENSMUST00000050178 Fam135aQ6NS59 1506 aa13.85□□□□□ -0.19
Ccdc60-201ENSMUST00000050178 Atad2bE9Q166 1460 aaKnown RBP13.79□□□□□ -0.2
Ccdc60-201ENSMUST00000050178 Smarca4Q3TKT4 1613 aaKnown RBP13.73□□□□□ -0.21
Ccdc60-201ENSMUST00000050178 Cecr2E9Q2Z1 1453 aa13.71□□□□□ -0.21
Ccdc60-201ENSMUST00000050178 HrcG5E8J6 738 aa13.7□□□□□ -0.22
Ccdc60-201ENSMUST00000050178 Cttnbp2B9EJA2 1648 aa13.65□□□□□ -0.22
Ccdc60-201ENSMUST00000050178 Synj1Q8CHC4 1574 aa13.65□□□□□ -0.22
Ccdc60-201ENSMUST00000050178 Top2bQ64511 1612 aa13.63□□□□□ -0.23
Ccdc60-201ENSMUST00000050178 Brd4Q9ESU6 1400 aaKnown RBP13.62□□□□□ -0.23
Ccdc60-201ENSMUST00000050178 Wdr62Q3U3T8 1523 aa13.59□□□□□ -0.23
Ccdc60-201ENSMUST00000050178 Unc13aQ4KUS2 1712 aa13.59□□□□□ -0.23
Ccdc60-201ENSMUST00000050178 CftrP26361 1476 aa13.57□□□□□ -0.24
Ccdc60-201ENSMUST00000050178 Iqgap2Q3UQ44 1575 aa13.55□□□□□ -0.24
Ccdc60-201ENSMUST00000050178 Cep164Q5DU05 1446 aa13.46□□□□□ -0.26
Ccdc60-201ENSMUST00000050178 Golga3P55937 1487 aa13.45□□□□□ -0.26
Ccdc60-201ENSMUST00000050178 Trim41Q5NCC3 630 aa13.44□□□□□ -0.26
Ccdc60-201ENSMUST00000050178 Cc2d2aQ8CFW7 1633 aa13.44□□□□□ -0.26
Ccdc60-201ENSMUST00000050178 Ccdc136Q3TVA9 1136 aa13.43□□□□□ -0.26
Ccdc60-201ENSMUST00000050178 Ercc6F8VPZ5 1481 aa13.38□□□□□ -0.27
Ccdc60-201ENSMUST00000050178 Gpatch8A2A6A1 1505 aa13.35□□□□□ -0.27
Ccdc60-201ENSMUST00000050178 TnnQ80Z71 1560 aa13.33□□□□□ -0.28
Ccdc60-201ENSMUST00000050178 Frmpd1A2AKB4 1549 aa13.33□□□□□ -0.28
Ccdc60-201ENSMUST00000050178 Rsf1E9PWW9 1441 aaKnown RBP13.29□□□□□ -0.28
Ccdc60-201ENSMUST00000050178 Ccdc88bQ4QRL3 1481 aa13.24□□□□□ -0.29
Ccdc60-201ENSMUST00000050178 Top2aQ01320 1528 aaKnown RBP13.21□□□□□ -0.29
Ccdc60-201ENSMUST00000050178 Fmn1Q05860 1466 aa13.19□□□□□ -0.3
Ccdc60-201ENSMUST00000050178 Eif4g1Q6NZJ6 1600 aaKnown RBP13.17□□□□□ -0.3
Ccdc60-201ENSMUST00000050178 Phldb1Q6PDH0 1371 aaKnown RBP13.17□□□□□ -0.3
Ccdc60-201ENSMUST00000050178 Lamc3Q9R0B6 1581 aa13.13□□□□□ -0.31
Ccdc60-201ENSMUST00000050178 Rapgef2Q8CHG7 1496 aa13.06□□□□□ -0.32
Ccdc60-201ENSMUST00000050178 Chic1Q8CBW7 227 aa13.04□□□□□ -0.32
Ccdc60-201ENSMUST00000050178 Mrc2Q64449 1479 aa13.03□□□□□ -0.32
Ccdc60-201ENSMUST00000050178 Rpgrip1Q9EPQ2 1331 aa12.98□□□□□ -0.33
Ccdc60-201ENSMUST00000050178 Eif4g3Q80XI3 1579 aaKnown RBP12.98□□□□□ -0.33
Ccdc60-201ENSMUST00000050178 Pbrm1Q8BSQ9 1634 aaKnown RBP12.93□□□□□ -0.34
Ccdc60-201ENSMUST00000050178 Camsap1A2AHC3 1581 aa12.91□□□□□ -0.34
Ccdc60-201ENSMUST00000050178 Dnajc5bQ9CQ94 199 aa12.89□□□□□ -0.35
Ccdc60-201ENSMUST00000050178 Lrriq1Q0P5X1 1673 aa12.89□□□□□ -0.35
Ccdc60-201ENSMUST00000050178 NrkQ9R0G8 1455 aa12.89□□□□□ -0.35
Ccdc60-201ENSMUST00000050178 Acin1Q9JIX8 1338 aaKnown RBP12.88□□□□□ -0.35
Ccdc60-201ENSMUST00000050178 Cngb1E1AZ71 1325 aa12.84□□□□□ -0.35
Ccdc60-201ENSMUST00000050178 Shroom2A2ALU4 1481 aa12.82□□□□□ -0.36
Ccdc60-201ENSMUST00000050178 Cep162Q6ZQ06 1403 aa12.8□□□□□ -0.36
Ccdc60-201ENSMUST00000050178 Map3k1P53349 1493 aa12.78□□□□□ -0.36
Ccdc60-201ENSMUST00000050178 Kif21aQ9QXL2 1672 aa12.78□□□□□ -0.36
Ccdc60-201ENSMUST00000050178 Shroom4Q1W617 1475 aa12.76□□□□□ -0.37
Ccdc60-201ENSMUST00000050178 Grin2bQ01097 1482 aa12.75□□□□□ -0.37
Ccdc60-201ENSMUST00000050178 Esf1Q3V1V3 845 aaKnown RBP12.74□□□□□ -0.37
Ccdc60-201ENSMUST00000050178 Erich3F6QRE9 1637 aa12.74□□□□□ -0.37
Ccdc60-201ENSMUST00000050178 Arhgap35Q91YM2 1499 aa12.73□□□□□ -0.37
Ccdc60-201ENSMUST00000050178 AqrQ8CFQ3 1481 aaKnown RBP12.71□□□□□ -0.37
Ccdc60-201ENSMUST00000050178 PtprkP35822 1457 aa12.71□□□□□ -0.38
Ccdc60-201ENSMUST00000050178 Zcchc11B2RX14 1644 aaKnown RBP12.7□□□□□ -0.38
Ccdc60-201ENSMUST00000050178 Mroh2bQ7M6Y6 1581 aa12.63□□□□□ -0.39
Ccdc60-201ENSMUST00000050178 Ccdc18Q640L5 1455 aa12.63□□□□□ -0.39
Ccdc60-201ENSMUST00000050178 Kif15Q6P9L6 1387 aa12.62□□□□□ -0.39
Ccdc60-201ENSMUST00000050178 Lmo7E9PYF4 1699 aaKnown RBP12.6□□□□□ -0.39
Ccdc60-201ENSMUST00000050178 Efcab5A0JP43 1406 aa12.57□□□□□ -0.4
Ccdc60-201ENSMUST00000050178 Ankrd26Q811D2 1581 aa12.57□□□□□ -0.4
Ccdc60-201ENSMUST00000050178 Rusc2Q80U22 1514 aa12.57□□□□□ -0.4
Ccdc60-201ENSMUST00000050178 Peg3Q3URU2 1571 aa12.56□□□□□ -0.4
Ccdc60-201ENSMUST00000050178 PogzQ8BZH4 1409 aaKnown RBP12.56□□□□□ -0.4
Ccdc60-201ENSMUST00000050178 Arhgef5E9Q7D5 1581 aa12.56□□□□□ -0.4
Ccdc60-201ENSMUST00000050178 Cux2P70298 1426 aa12.53□□□□□ -0.4
Ccdc60-201ENSMUST00000050178 Samd9lQ69Z37 1561 aa12.52□□□□□ -0.4
Ccdc60-201ENSMUST00000050178 Crocc2F6XLV1 1638 aa12.52□□□□□ -0.41
Ccdc60-201ENSMUST00000050178 Arap1Q4LDD4 1452 aa12.51□□□□□ -0.41
Ccdc60-201ENSMUST00000050178 TchhA0A0B4J1F9 1599 aa12.51□□□□□ -0.41
Ccdc60-201ENSMUST00000050178 Setd1bQ8CFT2 1985 aa12.5□□□□□ -0.41
Ccdc60-201ENSMUST00000050178 SynmQ70IV5 1561 aa12.5□□□□□ -0.41
Ccdc60-201ENSMUST00000050178 Ift140E9PY46 1464 aa12.49□□□□□ -0.41
Ccdc60-201ENSMUST00000050178 Gab3Q8BSM5 595 aa12.49□□□□□ -0.41
Ccdc60-201ENSMUST00000050178 Tiam1Q60610 1591 aa12.49□□□□□ -0.41
Ccdc60-201ENSMUST00000050178 Duox2A2AQ99 1517 aa12.48□□□□□ -0.41
Ccdc60-201ENSMUST00000050178 LrpprcQ6PB66 1392 aaKnown RBP12.47□□□□□ -0.41
Ccdc60-201ENSMUST00000050178 Kdm5bQ80Y84 1544 aa12.47□□□□□ -0.41
Ccdc60-201ENSMUST00000050178 Ncapd3Q6ZQK0 1506 aa12.45□□□□□ -0.42
Ccdc60-201ENSMUST00000050178 Urb2E9Q7L1 1524 aaKnown RBP12.44□□□□□ -0.42
Ccdc60-201ENSMUST00000050178 Pcf11G3X9Z4 1553 aa12.44□□□□□ -0.42
Retrieved 100 of 22,080 RNA–protein pairs in 14.1 ms