Protein–RNA interactions for Protein: A0A140LIW3

Frmpd3, FERM and PDZ domain-containing 3, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Frmpd3A0A140LIW3 Gm25239-201ENSMUST00000174915 86 ntBASIC49.37■■■■■ 5.49
Frmpd3A0A140LIW3 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC46.12■■■■■ 4.97
Frmpd3A0A140LIW3 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC45.01■■■■■ 4.8
Frmpd3A0A140LIW3 Gm24109-201ENSMUST00000175489 103 ntBASIC43.25■■■■■ 4.51
Frmpd3A0A140LIW3 Gm15042-201ENSMUST00000120212 883 ntBASIC42.58■■■■■ 4.41
Frmpd3A0A140LIW3 Gm15045-201ENSMUST00000117359 883 ntBASIC41.8■■■■■ 4.28
Frmpd3A0A140LIW3 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC41.79■■■■■ 4.28
Frmpd3A0A140LIW3 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC41.56■■■■■ 4.24
Frmpd3A0A140LIW3 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC41.49■■■■■ 4.23
Frmpd3A0A140LIW3 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC41.48■■■■■ 4.23
Frmpd3A0A140LIW3 Gm23366-201ENSMUST00000175022 89 ntBASIC41.06■■■■■ 4.16
Frmpd3A0A140LIW3 AC153911.1-202ENSMUST00000218534 1034 ntBASIC40.47■■■■■ 4.07
Frmpd3A0A140LIW3 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC39.99■■■■□ 3.99
Frmpd3A0A140LIW3 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC39.94■■■■□ 3.98
Frmpd3A0A140LIW3 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC39.91■■■■□ 3.98
Frmpd3A0A140LIW3 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC39.7■■■■□ 3.95
Frmpd3A0A140LIW3 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC39.61■■■■□ 3.93
Frmpd3A0A140LIW3 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC39.41■■■■□ 3.9
Frmpd3A0A140LIW3 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC39.2■■■■□ 3.87
Frmpd3A0A140LIW3 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC39.18■■■■□ 3.86
Frmpd3A0A140LIW3 Gm25238-201ENSMUST00000174914 89 ntBASIC39.17■■■■□ 3.86
Frmpd3A0A140LIW3 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC39.15■■■■□ 3.86
Frmpd3A0A140LIW3 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC39.06■■■■□ 3.84
Frmpd3A0A140LIW3 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC38.62■■■■□ 3.77
Frmpd3A0A140LIW3 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC38.44■■■■□ 3.74
Frmpd3A0A140LIW3 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC38.38■■■■□ 3.73
Frmpd3A0A140LIW3 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC38.32■■■■□ 3.73
Frmpd3A0A140LIW3 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC38.15■■■■□ 3.7
Frmpd3A0A140LIW3 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC38■■■■□ 3.67
Frmpd3A0A140LIW3 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC37.99■■■■□ 3.67
Frmpd3A0A140LIW3 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC37.91■■■■□ 3.66
Frmpd3A0A140LIW3 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC37.81■■■■□ 3.64
Frmpd3A0A140LIW3 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC37.78■■■■□ 3.64
Frmpd3A0A140LIW3 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC37.77■■■■□ 3.64
Frmpd3A0A140LIW3 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC37.76■■■■□ 3.64
Frmpd3A0A140LIW3 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC37.66■■■■□ 3.62
Frmpd3A0A140LIW3 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC37.63■■■■□ 3.61
Frmpd3A0A140LIW3 Gm25262-201ENSMUST00000174934 133 ntBASIC37.61■■■■□ 3.61
Frmpd3A0A140LIW3 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC37.49■■■■□ 3.59
Frmpd3A0A140LIW3 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC37.34■■■■□ 3.57
Frmpd3A0A140LIW3 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC37.3■■■■□ 3.56
Frmpd3A0A140LIW3 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC37.23■■■■□ 3.55
Frmpd3A0A140LIW3 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC37.21■■■■□ 3.55
Frmpd3A0A140LIW3 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC37.21■■■■□ 3.55
Frmpd3A0A140LIW3 Gm27325-201ENSMUST00000175467 74 ntBASIC37.19■■■■□ 3.54
Frmpd3A0A140LIW3 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC37.07■■■■□ 3.52
Frmpd3A0A140LIW3 Gm26115-201ENSMUST00000175605 87 ntBASIC37■■■■□ 3.51
Frmpd3A0A140LIW3 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC37■■■■□ 3.51
Frmpd3A0A140LIW3 Gm8109-201ENSMUST00000194076 746 ntBASIC36.91■■■■□ 3.5
Frmpd3A0A140LIW3 Rab21-202ENSMUST00000218831 843 ntBASIC36.85■■■■□ 3.49
Frmpd3A0A140LIW3 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC36.77■■■■□ 3.48
Frmpd3A0A140LIW3 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC36.76■■■■□ 3.48
Frmpd3A0A140LIW3 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC36.75■■■■□ 3.47
Frmpd3A0A140LIW3 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC36.75■■■■□ 3.47
Frmpd3A0A140LIW3 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC36.65■■■■□ 3.46
Frmpd3A0A140LIW3 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC36.62■■■■□ 3.45
Frmpd3A0A140LIW3 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC36.61■■■■□ 3.45
Frmpd3A0A140LIW3 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC36.6■■■■□ 3.45
Frmpd3A0A140LIW3 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC36.57■■■■□ 3.44
Frmpd3A0A140LIW3 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC36.46■■■■□ 3.43
Frmpd3A0A140LIW3 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC36.44■■■■□ 3.42
Frmpd3A0A140LIW3 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC36.39■■■■□ 3.42
Frmpd3A0A140LIW3 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC36.27■■■■□ 3.4
Frmpd3A0A140LIW3 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC36.24■■■■□ 3.39
Frmpd3A0A140LIW3 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC36.24■■■■□ 3.39
Frmpd3A0A140LIW3 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC36.22■■■■□ 3.39
Frmpd3A0A140LIW3 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC36.06■■■■□ 3.36
Frmpd3A0A140LIW3 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC36.02■■■■□ 3.36
Frmpd3A0A140LIW3 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC35.94■■■■□ 3.34
Frmpd3A0A140LIW3 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC35.91■■■■□ 3.34
Frmpd3A0A140LIW3 Gm17082-201ENSMUST00000166043 1091 ntBASIC35.83■■■■□ 3.33
Frmpd3A0A140LIW3 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC35.81■■■■□ 3.32
Frmpd3A0A140LIW3 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC35.8■■■■□ 3.32
Frmpd3A0A140LIW3 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC35.77■■■■□ 3.32
Frmpd3A0A140LIW3 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC35.75■■■■□ 3.31
Frmpd3A0A140LIW3 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC35.74■■■■□ 3.31
Frmpd3A0A140LIW3 Psd-208ENSMUST00000224556 2034 ntBASIC35.7■■■■□ 3.31
Frmpd3A0A140LIW3 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC35.69■■■■□ 3.3
Frmpd3A0A140LIW3 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC35.64■■■■□ 3.3
Frmpd3A0A140LIW3 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC35.56■■■■□ 3.28
Frmpd3A0A140LIW3 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC35.54■■■■□ 3.28
Frmpd3A0A140LIW3 Gm24804-201ENSMUST00000174982 85 ntBASIC35.54■■■■□ 3.28
Frmpd3A0A140LIW3 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC35.48■■■■□ 3.27
Frmpd3A0A140LIW3 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC35.41■■■■□ 3.26
Frmpd3A0A140LIW3 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC35.37■■■■□ 3.25
Frmpd3A0A140LIW3 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC35.34■■■■□ 3.25
Frmpd3A0A140LIW3 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC35.33■■■■□ 3.25
Frmpd3A0A140LIW3 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC35.32■■■■□ 3.25
Frmpd3A0A140LIW3 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC35.32■■■■□ 3.24
Frmpd3A0A140LIW3 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC35.3■■■■□ 3.24
Frmpd3A0A140LIW3 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC35.25■■■■□ 3.23
Frmpd3A0A140LIW3 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC35.22■■■■□ 3.23
Frmpd3A0A140LIW3 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC35.18■■■■□ 3.22
Frmpd3A0A140LIW3 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC35.16■■■■□ 3.22
Frmpd3A0A140LIW3 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC35.11■■■■□ 3.21
Frmpd3A0A140LIW3 Gm27322-201ENSMUST00000184007 104 ntBASIC35.1■■■■□ 3.21
Frmpd3A0A140LIW3 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC35.1■■■■□ 3.21
Frmpd3A0A140LIW3 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC35.07■■■■□ 3.2
Frmpd3A0A140LIW3 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC35.05■■■■□ 3.2
Frmpd3A0A140LIW3 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC35.04■■■■□ 3.2
Retrieved 100 of 76,532 protein–RNA pairs in 13.5 ms