Protein–RNA interactions for Protein: L7N2C4

Gm4340, Predicted gene 4340, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm4340L7N2C4 Gm25239-201ENSMUST00000174915 86 ntBASIC46.65■■■■■ 5.06
Gm4340L7N2C4 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC43.06■■■■■ 4.48
Gm4340L7N2C4 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC42.49■■■■■ 4.39
Gm4340L7N2C4 Gm15042-201ENSMUST00000120212 883 ntBASIC40.85■■■■■ 4.13
Gm4340L7N2C4 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC40.55■■■■■ 4.08
Gm4340L7N2C4 Gm24109-201ENSMUST00000175489 103 ntBASIC40.39■■■■■ 4.06
Gm4340L7N2C4 Gm15045-201ENSMUST00000117359 883 ntBASIC40■■■■□ 3.99
Gm4340L7N2C4 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC39.82■■■■□ 3.97
Gm4340L7N2C4 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC39.57■■■■□ 3.92
Gm4340L7N2C4 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC39.38■■■■□ 3.89
Gm4340L7N2C4 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC39.28■■■■□ 3.88
Gm4340L7N2C4 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC39.04■■■■□ 3.84
Gm4340L7N2C4 Gm23366-201ENSMUST00000175022 89 ntBASIC38.95■■■■□ 3.83
Gm4340L7N2C4 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC38.75■■■■□ 3.79
Gm4340L7N2C4 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC38.31■■■■□ 3.72
Gm4340L7N2C4 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC38.15■■■■□ 3.7
Gm4340L7N2C4 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC38.04■■■■□ 3.68
Gm4340L7N2C4 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC37.85■■■■□ 3.65
Gm4340L7N2C4 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC37.72■■■■□ 3.63
Gm4340L7N2C4 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC37.72■■■■□ 3.63
Gm4340L7N2C4 AC153911.1-202ENSMUST00000218534 1034 ntBASIC37.59■■■■□ 3.61
Gm4340L7N2C4 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC37.5■■■■□ 3.59
Gm4340L7N2C4 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC37.45■■■■□ 3.59
Gm4340L7N2C4 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC37.42■■■■□ 3.58
Gm4340L7N2C4 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC37.39■■■■□ 3.58
Gm4340L7N2C4 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC37.39■■■■□ 3.58
Gm4340L7N2C4 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC37.38■■■■□ 3.57
Gm4340L7N2C4 Psd-208ENSMUST00000224556 2034 ntBASIC37.37■■■■□ 3.57
Gm4340L7N2C4 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC37.25■■■■□ 3.55
Gm4340L7N2C4 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC37.14■■■■□ 3.54
Gm4340L7N2C4 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC36.99■■■■□ 3.51
Gm4340L7N2C4 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC36.98■■■■□ 3.51
Gm4340L7N2C4 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC36.95■■■■□ 3.51
Gm4340L7N2C4 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC36.93■■■■□ 3.5
Gm4340L7N2C4 Gm25238-201ENSMUST00000174914 89 ntBASIC36.81■■■■□ 3.48
Gm4340L7N2C4 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC36.72■■■■□ 3.47
Gm4340L7N2C4 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC36.57■■■■□ 3.45
Gm4340L7N2C4 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC36.49■■■■□ 3.43
Gm4340L7N2C4 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC36.37■■■■□ 3.41
Gm4340L7N2C4 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC36.27■■■■□ 3.4
Gm4340L7N2C4 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC36.27■■■■□ 3.4
Gm4340L7N2C4 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC36.1■■■■□ 3.37
Gm4340L7N2C4 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC36.07■■■■□ 3.36
Gm4340L7N2C4 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC35.96■■■■□ 3.35
Gm4340L7N2C4 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC35.96■■■■□ 3.35
Gm4340L7N2C4 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC35.89■■■■□ 3.34
Gm4340L7N2C4 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC35.89■■■■□ 3.34
Gm4340L7N2C4 Gm27325-201ENSMUST00000175467 74 ntBASIC35.85■■■■□ 3.33
Gm4340L7N2C4 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC35.75■■■■□ 3.31
Gm4340L7N2C4 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC35.74■■■■□ 3.31
Gm4340L7N2C4 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC35.68■■■■□ 3.3
Gm4340L7N2C4 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC35.63■■■■□ 3.29
Gm4340L7N2C4 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC35.6■■■■□ 3.29
Gm4340L7N2C4 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC35.58■■■■□ 3.29
Gm4340L7N2C4 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC35.51■■■■□ 3.28
Gm4340L7N2C4 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC35.39■■■■□ 3.26
Gm4340L7N2C4 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC35.35■■■■□ 3.25
Gm4340L7N2C4 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC35.31■■■■□ 3.24
Gm4340L7N2C4 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC35.28■■■■□ 3.24
Gm4340L7N2C4 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC35.26■■■■□ 3.24
Gm4340L7N2C4 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC35.17■■■■□ 3.22
Gm4340L7N2C4 Gm25262-201ENSMUST00000174934 133 ntBASIC35.15■■■■□ 3.22
Gm4340L7N2C4 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC35.11■■■■□ 3.21
Gm4340L7N2C4 Rab21-202ENSMUST00000218831 843 ntBASIC35.11■■■■□ 3.21
Gm4340L7N2C4 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC35.09■■■■□ 3.21
Gm4340L7N2C4 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC35.05■■■■□ 3.2
Gm4340L7N2C4 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC34.98■■■■□ 3.19
Gm4340L7N2C4 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC34.98■■■■□ 3.19
Gm4340L7N2C4 Gm10524-201ENSMUST00000181931 1893 ntBASIC34.95■■■■□ 3.19
Gm4340L7N2C4 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC34.95■■■■□ 3.18
Gm4340L7N2C4 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC34.94■■■■□ 3.18
Gm4340L7N2C4 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC34.88■■■■□ 3.17
Gm4340L7N2C4 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC34.88■■■■□ 3.17
Gm4340L7N2C4 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC34.87■■■■□ 3.17
Gm4340L7N2C4 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC34.81■■■■□ 3.16
Gm4340L7N2C4 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC34.78■■■■□ 3.16
Gm4340L7N2C4 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC34.78■■■■□ 3.16
Gm4340L7N2C4 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC34.78■■■■□ 3.16
Gm4340L7N2C4 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC34.77■■■■□ 3.16
Gm4340L7N2C4 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC34.65■■■■□ 3.14
Gm4340L7N2C4 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC34.6■■■■□ 3.13
Gm4340L7N2C4 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC34.6■■■■□ 3.13
Gm4340L7N2C4 CT025624.2-201ENSMUST00000223609 1909 ntBASIC34.58■■■■□ 3.13
Gm4340L7N2C4 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC34.56■■■■□ 3.12
Gm4340L7N2C4 Gm42596-201ENSMUST00000196305 1958 ntBASIC34.54■■■■□ 3.12
Gm4340L7N2C4 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC34.54■■■■□ 3.12
Gm4340L7N2C4 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC34.51■■■■□ 3.11
Gm4340L7N2C4 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC34.49■■■■□ 3.11
Gm4340L7N2C4 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC34.46■■■■□ 3.11
Gm4340L7N2C4 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC34.44■■■■□ 3.1
Gm4340L7N2C4 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC34.42■■■■□ 3.1
Gm4340L7N2C4 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC34.41■■■■□ 3.1
Gm4340L7N2C4 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC34.38■■■■□ 3.09
Gm4340L7N2C4 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC34.35■■■■□ 3.09
Gm4340L7N2C4 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC34.31■■■■□ 3.08
Gm4340L7N2C4 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC34.27■■■■□ 3.08
Gm4340L7N2C4 Gm26115-201ENSMUST00000175605 87 ntBASIC34.22■■■■□ 3.07
Gm4340L7N2C4 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC34.2■■■■□ 3.07
Gm4340L7N2C4 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC34.14■■■■□ 3.06
Gm4340L7N2C4 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC34.13■■■■□ 3.05
Retrieved 100 of 76,532 protein–RNA pairs in 12 ms