RNA–Protein interactions for RNA: tP(UGG)A

TRN1, Transcript of Proline tRNA (tRNA-Pro), predicted by tRNAscan-SE analysis, yeastyeast

Gene TRN1, Length 72 nt, Biotype tRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRN1tP(UGG)A YHL026CP38740 315 aa16.91■□□□□ 0.3
TRN1tP(UGG)A ULI1P43604 169 aa16.91■□□□□ 0.3
TRN1tP(UGG)A PLP2Q12017 286 aa16.91■□□□□ 0.3
TRN1tP(UGG)A OSH2Q12451 1283 aa16.91■□□□□ 0.3
TRN1tP(UGG)A ASP3-2P0CX77 362 aa16.9■□□□□ 0.3
TRN1tP(UGG)A ASP3-3P0CX78 362 aa16.9■□□□□ 0.3
TRN1tP(UGG)A ASP3-4P0CX79 362 aa16.9■□□□□ 0.3
TRN1tP(UGG)A ASP3-1P0CZ17 362 aa16.9■□□□□ 0.3
TRN1tP(UGG)A NAT1P12945 854 aaKnown RBP16.9■□□□□ 0.3
TRN1tP(UGG)A SPO74P45819 413 aa16.9■□□□□ 0.3
TRN1tP(UGG)A ISM1P48526 1002 aa16.9■□□□□ 0.3
TRN1tP(UGG)A YGR035CP53222 116 aa16.9■□□□□ 0.3
TRN1tP(UGG)A UBP3Q01477 912 aaKnown RBP RIP-Chip data16.9■□□□□ 0.3not detected
TRN1tP(UGG)A YPR078CQ06813 372 aa16.9■□□□□ 0.3
TRN1tP(UGG)A IWR1Q07532 353 aaPredicted RBP16.9■□□□□ 0.3
TRN1tP(UGG)A ATG9Q12142 997 aa16.9■□□□□ 0.3
TRN1tP(UGG)A SMC1P32908 1225 aa16.89■□□□□ 0.29
TRN1tP(UGG)A YER186CP40101 306 aa16.89■□□□□ 0.29
TRN1tP(UGG)A MAG2Q06436 670 aaKnown RBP16.89■□□□□ 0.29
TRN1tP(UGG)A APL4Q12028 832 aa16.89■□□□□ 0.29
TRN1tP(UGG)A HMI1Q12039 706 aa16.89■□□□□ 0.29
TRN1tP(UGG)A PUS1Q12211 544 aaKnown RBP16.89■□□□□ 0.29
TRN1tP(UGG)A CDC11P32458 415 aa16.88■□□□□ 0.29
TRN1tP(UGG)A CSE2P33308 149 aa16.88■□□□□ 0.29
TRN1tP(UGG)A EBP2P36049 427 aaKnown RBP16.88■□□□□ 0.29
TRN1tP(UGG)A DAS1P47005 663 aa16.88■□□□□ 0.29
TRN1tP(UGG)A CLA4P48562 842 aa16.88■□□□□ 0.29
TRN1tP(UGG)A RPA49Q01080 415 aaPredicted RBP16.88■□□□□ 0.29
TRN1tP(UGG)A SGT2Q12118 346 aaKnown RBP16.88■□□□□ 0.29
TRN1tP(UGG)A YOR022CQ12204 715 aa16.88■□□□□ 0.29
TRN1tP(UGG)A CYC8P14922 966 aa16.87■□□□□ 0.29
TRN1tP(UGG)A TUP1P16649 713 aa16.87■□□□□ 0.29
TRN1tP(UGG)A POA1P38218 177 aa16.87■□□□□ 0.29
TRN1tP(UGG)A ESL1P40456 1118 aa16.87■□□□□ 0.29
TRN1tP(UGG)A SDS3P40505 327 aa16.87■□□□□ 0.29
TRN1tP(UGG)A IES1P43579 692 aa16.87■□□□□ 0.29
TRN1tP(UGG)A CPR7P47103 393 aa16.87■□□□□ 0.29
TRN1tP(UGG)A KIP1P28742 1111 aa16.86■□□□□ 0.29
TRN1tP(UGG)A RAD54P32863 898 aa16.86■□□□□ 0.29
TRN1tP(UGG)A PTC4P38089 393 aa16.86■□□□□ 0.29
TRN1tP(UGG)A HIP1P06775 603 aa16.85■□□□□ 0.29
TRN1tP(UGG)A TIF1P10081 395 aaKnown RBP16.85■□□□□ 0.29
TRN1tP(UGG)A SPO12P17123 173 aa16.85■□□□□ 0.29
TRN1tP(UGG)A SMC3P47037 1230 aa16.85■□□□□ 0.29
TRN1tP(UGG)A TAD1P53065 400 aa16.85■□□□□ 0.29
TRN1tP(UGG)A YML082WQ04533 649 aaKnown RBP16.85■□□□□ 0.29
TRN1tP(UGG)A DNL4Q08387 944 aaPredicted RBP16.85■□□□□ 0.29
TRN1tP(UGG)A GIS3Q12418 502 aa16.85■□□□□ 0.29
TRN1tP(UGG)A PPR1P07272 904 aaPredicted RBP16.84■□□□□ 0.29
TRN1tP(UGG)A CDC42P19073 191 aa16.84■□□□□ 0.29
TRN1tP(UGG)A RSA4P25382 515 aaKnown RBP16.84■□□□□ 0.29
TRN1tP(UGG)A HEL1P36113 551 aa16.84■□□□□ 0.29
TRN1tP(UGG)A YHR054CP38780 354 aa16.84■□□□□ 0.29
TRN1tP(UGG)A ATG3P40344 310 aa16.84■□□□□ 0.29
TRN1tP(UGG)A SNU56Q03782 492 aaKnown RBP16.84■□□□□ 0.29
TRN1tP(UGG)A ABP140Q08641 628 aaKnown RBP16.84■□□□□ 0.29
TRN1tP(UGG)A RRP43P25359 394 aaPredicted RBP16.83■□□□□ 0.28
TRN1tP(UGG)A RRT12P25381 491 aa16.83■□□□□ 0.28
TRN1tP(UGG)A MNR2P35724 969 aa16.83■□□□□ 0.28
TRN1tP(UGG)A OSW7P43611 510 aa16.83■□□□□ 0.28
TRN1tP(UGG)A ESBP6P53918 673 aa16.83■□□□□ 0.28
TRN1tP(UGG)A SKY1Q03656 742 aa16.83■□□□□ 0.28
TRN1tP(UGG)A PDC6P26263 563 aaKnown RBP16.82■□□□□ 0.28
TRN1tP(UGG)A MFT1P33441 392 aaKnown RBP16.82■□□□□ 0.28
TRN1tP(UGG)A SMC2P38989 1170 aaKnown RBP16.82■□□□□ 0.28
TRN1tP(UGG)A YAP5P40574 245 aa16.82■□□□□ 0.28
TRN1tP(UGG)A SBE2P42223 864 aaKnown RBP16.82■□□□□ 0.28
TRN1tP(UGG)A STB4P50104 949 aa16.82■□□□□ 0.28
TRN1tP(UGG)A STE20Q03497 939 aaKnown RBP16.82■□□□□ 0.28
TRN1tP(UGG)A PPM1Q04081 328 aa16.82■□□□□ 0.28
TRN1tP(UGG)A YCG1Q06680 1035 aa16.82■□□□□ 0.28
TRN1tP(UGG)A SPC110P32380 944 aa16.81■□□□□ 0.28
TRN1tP(UGG)A JNM1P36224 373 aa16.81■□□□□ 0.28
TRN1tP(UGG)A SLX1P38324 304 aa16.81■□□□□ 0.28
TRN1tP(UGG)A SHQ1P40486 507 aaPredicted RBP16.81■□□□□ 0.28
TRN1tP(UGG)A MMM1P41800 426 aa16.81■□□□□ 0.28
TRN1tP(UGG)A ERG5P54781 538 aa16.81■□□□□ 0.28
TRN1tP(UGG)A EEB1Q02891 456 aa16.81■□□□□ 0.28
TRN1tP(UGG)A CDD1Q06549 142 aa16.81■□□□□ 0.28
TRN1tP(UGG)A COX11P19516 300 aaKnown RBP16.8■□□□□ 0.28
TRN1tP(UGG)A DAL2P25335 343 aa16.8■□□□□ 0.28
TRN1tP(UGG)A YLR455WQ06188 304 aa16.8■□□□□ 0.28
TRN1tP(UGG)A CTF3Q12748 733 aa16.8■□□□□ 0.28
TRN1tP(UGG)A JHD1P40034 492 aa16.79■□□□□ 0.28
TRN1tP(UGG)A YGR130CP53278 816 aa16.79■□□□□ 0.28
TRN1tP(UGG)A NEW1Q08972 1196 aaKnown RBP16.79■□□□□ 0.28
TRN1tP(UGG)A GAL10P04397 699 aa16.78■□□□□ 0.28
TRN1tP(UGG)A CDC33P07260 213 aaKnown RBP16.78■□□□□ 0.28
TRN1tP(UGG)A MTF2P10849 440 aa16.78■□□□□ 0.28
TRN1tP(UGG)A MSD1P15179 658 aaKnown RBP16.78■□□□□ 0.28
TRN1tP(UGG)A PCH2P38126 564 aa16.78■□□□□ 0.28
TRN1tP(UGG)A KAP123P40069 1113 aaKnown RBP16.78■□□□□ 0.28
TRN1tP(UGG)A OPT1P40897 799 aa16.78■□□□□ 0.28
TRN1tP(UGG)A ALT1P52893 592 aa16.78■□□□□ 0.28
TRN1tP(UGG)A RCR2Q03446 210 aaKnown RBP16.78■□□□□ 0.28
TRN1tP(UGG)A VPS38Q05919 439 aa16.78■□□□□ 0.28
TRN1tP(UGG)A YOL098CQ12496 1037 aa16.78■□□□□ 0.28
TRN1tP(UGG)A ECM3Q99252 613 aa16.78■□□□□ 0.28
TRN1tP(UGG)A AI5_BETAQ9ZZX0 354 aa16.78■□□□□ 0.28
TRN1tP(UGG)A CIT2P08679 460 aa16.77■□□□□ 0.28
Retrieved 100 of 5,963 RNA–protein pairs in 27.6 ms