RNA–Protein interactions for RNA: YOR004W

UTP23, Transcript of Component of the small subunit processome, yeast

Gene UTP23, Length 765 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UTP23	YOR004W	CCC2	P38995	1004 aa		4.7	□□□□□ -1.66
UTP23	YOR004W	PHO23	P50947	330 aa		4.7	□□□□□ -1.66
UTP23	YOR004W	DUS3	Q06053	668 aa	Known RBP	4.7	□□□□□ -1.66
UTP23	YOR004W	MET5	P47169	1442 aa		4.7	□□□□□ -1.66
UTP23	YOR004W	KRE5	P22023	1365 aa		4.69	□□□□□ -1.66
UTP23	YOR004W	SPE1	P08432	466 aa		4.69	□□□□□ -1.66
UTP23	YOR004W	YEF3	P16521	1044 aa	Known RBP	4.69	□□□□□ -1.66
UTP23	YOR004W	RPC82	P32349	654 aa		4.69	□□□□□ -1.66
UTP23	YOR004W	MPP10	P47083	593 aa	Known RBP	4.69	□□□□□ -1.66
UTP23	YOR004W	ECM16	Q04217	1267 aa	Known RBP	4.69	□□□□□ -1.66
UTP23	YOR004W	DNF3	Q12674	1656 aa		4.69	□□□□□ -1.66
UTP23	YOR004W	PRI2	P20457	528 aa		4.68	□□□□□ -1.66
UTP23	YOR004W	ATG19	P35193	415 aa		4.68	□□□□□ -1.66
UTP23	YOR004W	YKL069W	P36088	180 aa		4.68	□□□□□ -1.66
UTP23	YOR004W	NPP2	P39997	493 aa		4.68	□□□□□ -1.66
UTP23	YOR004W	CHZ1	P40019	153 aa	Predicted RBP	4.68	□□□□□ -1.66
UTP23	YOR004W	YIL092W	P40497	633 aa		4.68	□□□□□ -1.66
UTP23	YOR004W	DJP1	P40564	432 aa		4.68	□□□□□ -1.66
UTP23	YOR004W	GUS1	P46655	708 aa	Known RBP RIP-Chip data	4.68	□□□□□ -1.66	not detected
UTP23	YOR004W	SNU71	P53207	620 aa	Known RBP	4.68	□□□□□ -1.66
UTP23	YOR004W	SFB2	P53953	876 aa		4.68	□□□□□ -1.66
UTP23	YOR004W	NOP58	Q12499	511 aa	Known RBP	4.68	□□□□□ -1.66
UTP23	YOR004W	BCK1	Q01389	1478 aa		4.68	□□□□□ -1.66
UTP23	YOR004W	RTR1	P40084	226 aa	Predicted RBP	4.67	□□□□□ -1.66
UTP23	YOR004W	GYP7	P48365	746 aa		4.67	□□□□□ -1.66
UTP23	YOR004W	SUN4	P53616	420 aa		4.67	□□□□□ -1.66
UTP23	YOR004W	YDR306C	Q06640	478 aa		4.67	□□□□□ -1.66
UTP23	YOR004W	KCS1	Q12494	1050 aa		4.67	□□□□□ -1.66
UTP23	YOR004W	MRP8	P35719	219 aa		4.66	□□□□□ -1.66
UTP23	YOR004W	YAP3	P38749	330 aa		4.66	□□□□□ -1.66
UTP23	YOR004W	VAC8	P39968	578 aa		4.66	□□□□□ -1.66
UTP23	YOR004W	YER158C	P40095	573 aa		4.66	□□□□□ -1.66
UTP23	YOR004W	URM1	P40554	99 aa	Predicted RBP	4.66	□□□□□ -1.66
UTP23	YOR004W	AIM21	P40563	679 aa		4.66	□□□□□ -1.66
UTP23	YOR004W	EXG2	P52911	562 aa		4.66	□□□□□ -1.66
UTP23	YOR004W	PIL1	P53252	339 aa	Known RBP	4.66	□□□□□ -1.66
UTP23	YOR004W	COG8	Q04632	607 aa		4.66	□□□□□ -1.66
UTP23	YOR004W	YPR196W	Q06595	470 aa		4.66	□□□□□ -1.66
UTP23	YOR004W	PPH3	P32345	308 aa		4.65	□□□□□ -1.67
UTP23	YOR004W	DEF1	P35732	738 aa	Known RBP	4.65	□□□□□ -1.67
UTP23	YOR004W	YKR078W	P36158	585 aa	Known RBP	4.65	□□□□□ -1.67
UTP23	YOR004W	PBY1	P38254	753 aa		4.65	□□□□□ -1.67
UTP23	YOR004W	ALD6	P54115	500 aa	Known RBP	4.65	□□□□□ -1.67
UTP23	YOR004W	TAF8	Q03750	510 aa		4.65	□□□□□ -1.67
UTP23	YOR004W	NPC2	Q12408	173 aa		4.65	□□□□□ -1.67
UTP23	YOR004W	DAL5	P15365	543 aa		4.64	□□□□□ -1.67
UTP23	YOR004W	PFK1	P16861	987 aa	Known RBP	4.64	□□□□□ -1.67
UTP23	YOR004W	PRD1	P25375	712 aa		4.64	□□□□□ -1.67
UTP23	YOR004W	TSL1	P38427	1098 aa	Known RBP	4.64	□□□□□ -1.67
UTP23	YOR004W	MSS4	P38994	779 aa		4.64	□□□□□ -1.67
UTP23	YOR004W	NCS6	P53088	359 aa		4.64	□□□□□ -1.67
UTP23	YOR004W	RRP46	P53256	223 aa	Predicted RBP	4.64	□□□□□ -1.67
UTP23	YOR004W	TAP42	Q04372	366 aa		4.64	□□□□□ -1.67
UTP23	YOR004W	AIM44	Q99299	758 aa		4.64	□□□□□ -1.67
UTP23	YOR004W	ADE8	P04161	214 aa		4.63	□□□□□ -1.67
UTP23	YOR004W	CDC48	P25694	835 aa	Known RBP	4.63	□□□□□ -1.67
UTP23	YOR004W	AAR2	P32357	355 aa	Predicted RBP	4.63	□□□□□ -1.67
UTP23	YOR004W	IRR1	P40541	1150 aa		4.63	□□□□□ -1.67
UTP23	YOR004W	RAI1	P53063	387 aa	Known RBP	4.63	□□□□□ -1.67
UTP23	YOR004W	TPO2	P53283	614 aa		4.63	□□□□□ -1.67
UTP23	YOR004W	SLI1	P53304	468 aa		4.63	□□□□□ -1.67
UTP23	YOR004W	HEF3	P53978	1044 aa	Known RBP	4.63	□□□□□ -1.67
UTP23	YOR004W	THI22	Q06490	572 aa		4.63	□□□□□ -1.67
UTP23	YOR004W	WHI4	Q07655	649 aa	Known RBP	4.63	□□□□□ -1.67
UTP23	YOR004W	CTF4	Q01454	927 aa		4.62	□□□□□ -1.67
UTP23	YOR004W	KIN4	Q01919	800 aa		4.62	□□□□□ -1.67
UTP23	YOR004W	LCD1	Q04377	747 aa		4.62	□□□□□ -1.67
UTP23	YOR004W	TDA5	Q06417	326 aa	Known RBP	4.62	□□□□□ -1.67
UTP23	YOR004W	AIM39	Q08223	395 aa		4.62	□□□□□ -1.67
UTP23	YOR004W	ENB1	Q08299	606 aa		4.62	□□□□□ -1.67
UTP23	YOR004W	NPP1	P25353	742 aa		4.61	□□□□□ -1.67
UTP23	YOR004W	HRR25	P29295	494 aa	Known RBP	4.61	□□□□□ -1.67
UTP23	YOR004W	GRX4	P32642	244 aa		4.61	□□□□□ -1.67
UTP23	YOR004W	YBR238C	P38330	731 aa	Known RBP	4.61	□□□□□ -1.67
UTP23	YOR004W	CHS7	P38843	316 aa		4.61	□□□□□ -1.67
UTP23	YOR004W	SIT1	P39980	628 aa		4.61	□□□□□ -1.67
UTP23	YOR004W	SPF1	P39986	1215 aa	Known RBP	4.61	□□□□□ -1.67
UTP23	YOR004W	YKE2	P52553	114 aa		4.61	□□□□□ -1.67
UTP23	YOR004W	GUP2	Q08929	609 aa		4.61	□□□□□ -1.67
UTP23	YOR004W	UPC2	Q12151	913 aa		4.61	□□□□□ -1.67
UTP23	YOR004W	KAR4	P25583	335 aa		4.6	□□□□□ -1.67
UTP23	YOR004W	YRO2	P38079	344 aa		4.6	□□□□□ -1.67
UTP23	YOR004W	TCD1	P38756	429 aa		4.6	□□□□□ -1.67
UTP23	YOR004W	RAD50	P12753	1312 aa		4.6	□□□□□ -1.67
UTP23	YOR004W	RAD9	P14737	1309 aa		4.6	□□□□□ -1.67
UTP23	YOR004W	PSK1	P31374	1356 aa		4.6	□□□□□ -1.67
UTP23	YOR004W	PRP9	P19736	530 aa	Known RBP	4.59	□□□□□ -1.67
UTP23	YOR004W	SED4	P25365	1065 aa		4.59	□□□□□ -1.67
UTP23	YOR004W	STE5	P32917	917 aa		4.59	□□□□□ -1.67
UTP23	YOR004W	AFR1	P33304	620 aa		4.59	□□□□□ -1.67
UTP23	YOR004W	RIX1	P38883	763 aa	Predicted RBP	4.59	□□□□□ -1.67
UTP23	YOR004W	BDH2	P39713	417 aa		4.59	□□□□□ -1.67
UTP23	YOR004W	TPM2	P40414	161 aa		4.59	□□□□□ -1.67
UTP23	YOR004W	NUP145	P49687	1317 aa		4.59	□□□□□ -1.67
UTP23	YOR004W	HST1	P53685	503 aa		4.59	□□□□□ -1.67
UTP23	YOR004W	LAS17	Q12446	633 aa		4.59	□□□□□ -1.67
UTP23	YOR004W	ROM2	P51862	1356 aa	Known RBP	4.58	□□□□□ -1.68
UTP23	YOR004W	CAD1	P24813	409 aa	Known RBP	4.58	□□□□□ -1.68
UTP23	YOR004W	STE13	P33894	931 aa		4.58	□□□□□ -1.68
UTP23	YOR004W	PAM1	P37304	830 aa	Known RBP	4.58	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 12.2 ms