RNA–Protein interactions for RNA: YOL116W

MSN1, Transcript of Transcriptional activator, yeast

Gene MSN1, Length 1,149 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MSN1	YOL116W	BUL2	Q03758	920 aa	Known RBP	4.36	□□□□□ -1.71
MSN1	YOL116W	YOR131C	Q12486	218 aa		4.36	□□□□□ -1.71
MSN1	YOL116W	RPS9A	O13516	197 aa	Known RBP	4.35	□□□□□ -1.71
MSN1	YOL116W	PMA1	P05030	918 aa	Known RBP	4.35	□□□□□ -1.71
MSN1	YOL116W	TYE7	P33122	291 aa	Predicted RBP	4.35	□□□□□ -1.71
MSN1	YOL116W	CEP3	P40969	608 aa		4.35	□□□□□ -1.71
MSN1	YOL116W	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	4.35	□□□□□ -1.71	not detected
MSN1	YOL116W	HUL5	P53119	910 aa		4.35	□□□□□ -1.71
MSN1	YOL116W	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	4.35	□□□□□ -1.71	not detected
MSN1	YOL116W	ENB1	Q08299	606 aa		4.35	□□□□□ -1.71
MSN1	YOL116W	CDC53	Q12018	815 aa	Known RBP	4.35	□□□□□ -1.71
MSN1	YOL116W	UPC2	Q12151	913 aa		4.35	□□□□□ -1.71
MSN1	YOL116W	NTO1	Q12311	748 aa		4.35	□□□□□ -1.71
MSN1	YOL116W	NPC2	Q12408	173 aa		4.35	□□□□□ -1.71
MSN1	YOL116W	KCS1	Q12494	1050 aa		4.35	□□□□□ -1.71
MSN1	YOL116W	PDR10	P51533	1564 aa		4.35	□□□□□ -1.71
MSN1	YOL116W	MPH2	P0CD99	609 aa		4.34	□□□□□ -1.71
MSN1	YOL116W	MSD1	P15179	658 aa	Known RBP	4.34	□□□□□ -1.71
MSN1	YOL116W	PFK1	P16861	987 aa	Known RBP	4.34	□□□□□ -1.71
MSN1	YOL116W	GAL11	P19659	1081 aa		4.34	□□□□□ -1.71
MSN1	YOL116W	PMI40	P29952	429 aa	Known RBP	4.34	□□□□□ -1.71
MSN1	YOL116W	EXG2	P52911	562 aa		4.34	□□□□□ -1.71
MSN1	YOL116W	NSE3	Q05541	303 aa		4.34	□□□□□ -1.71
MSN1	YOL116W	WHI4	Q07655	649 aa	Known RBP	4.34	□□□□□ -1.71
MSN1	YOL116W	AIM39	Q08223	395 aa		4.34	□□□□□ -1.71
MSN1	YOL116W	IQG1	Q12280	1495 aa		4.33	□□□□□ -1.72
MSN1	YOL116W	TOM70	P07213	617 aa	Known RBP	4.33	□□□□□ -1.72
MSN1	YOL116W	SRP40	P32583	406 aa	Predicted RBP	4.33	□□□□□ -1.72
MSN1	YOL116W	YHR020W	P38708	688 aa	Known RBP	4.33	□□□□□ -1.72
MSN1	YOL116W	RSP5	P39940	809 aa	Known RBP	4.33	□□□□□ -1.72
MSN1	YOL116W	YIL108W	P40483	696 aa	Known RBP	4.33	□□□□□ -1.72
MSN1	YOL116W	UBP6	P43593	499 aa	Known RBP	4.33	□□□□□ -1.72
MSN1	YOL116W	DAM1	P53267	343 aa		4.33	□□□□□ -1.72
MSN1	YOL116W	NOG2	P53742	486 aa	Known RBP	4.33	□□□□□ -1.72
MSN1	YOL116W	TAF8	Q03750	510 aa		4.33	□□□□□ -1.72
MSN1	YOL116W	BDF2	Q07442	638 aa		4.33	□□□□□ -1.72
MSN1	YOL116W	YOL098C	Q12496	1037 aa		4.33	□□□□□ -1.72
MSN1	YOL116W	CAD1	P24813	409 aa	Known RBP	4.32	□□□□□ -1.72
MSN1	YOL116W	URA1	P28272	314 aa	Predicted RBP	4.32	□□□□□ -1.72
MSN1	YOL116W	CHZ1	P40019	153 aa	Predicted RBP	4.32	□□□□□ -1.72
MSN1	YOL116W	MSE1	P48525	536 aa		4.32	□□□□□ -1.72
MSN1	YOL116W	PHO23	P50947	330 aa		4.32	□□□□□ -1.72
MSN1	YOL116W	PUS2	P53167	370 aa		4.32	□□□□□ -1.72
MSN1	YOL116W	YKR011C	Q02209	353 aa		4.32	□□□□□ -1.72
MSN1	YOL116W	SSL1	Q04673	461 aa	Predicted RBP	4.32	□□□□□ -1.72
MSN1	YOL116W	PNS1	Q12412	539 aa		4.32	□□□□□ -1.72
MSN1	YOL116W	BUD3	P25558	1636 aa		4.32	□□□□□ -1.72
MSN1	YOL116W	YOR093C	Q12275	1648 aa		4.32	□□□□□ -1.72
MSN1	YOL116W	CAN1	P04817	590 aa		4.31	□□□□□ -1.72
MSN1	YOL116W	FBP1	P09201	348 aa		4.31	□□□□□ -1.72
MSN1	YOL116W	TOP3	P13099	656 aa		4.31	□□□□□ -1.72
MSN1	YOL116W	ERT1	P38140	529 aa		4.31	□□□□□ -1.72
MSN1	YOL116W	SDP1	P40479	209 aa		4.31	□□□□□ -1.72
MSN1	YOL116W	ENV7	Q12003	364 aa		4.31	□□□□□ -1.72
MSN1	YOL116W	PUS9	Q12069	462 aa		4.31	□□□□□ -1.72
MSN1	YOL116W	SWM1	Q12379	170 aa		4.31	□□□□□ -1.72
MSN1	YOL116W	KAR4	P25583	335 aa		4.3	□□□□□ -1.72
MSN1	YOL116W	CYS3	P31373	394 aa	Known RBP	4.3	□□□□□ -1.72
MSN1	YOL116W	RPD3	P32561	433 aa		4.3	□□□□□ -1.72
MSN1	YOL116W	DEF1	P35732	738 aa	Known RBP	4.3	□□□□□ -1.72
MSN1	YOL116W	HDA1	P53973	706 aa		4.3	□□□□□ -1.72
MSN1	YOL116W	YDR514C	Q04408	483 aa		4.3	□□□□□ -1.72
MSN1	YOL116W	REH1	Q06709	432 aa		4.3	□□□□□ -1.72
MSN1	YOL116W	MLP2	P40457	1679 aa		4.29	□□□□□ -1.72
MSN1	YOL116W	STE14	P32584	239 aa		4.29	□□□□□ -1.72
MSN1	YOL116W	EMC3	P36039	253 aa		4.29	□□□□□ -1.72
MSN1	YOL116W	AIM21	P40563	679 aa		4.29	□□□□□ -1.72
MSN1	YOL116W	ALG2	P43636	503 aa		4.29	□□□□□ -1.72
MSN1	YOL116W	PEX19	Q07418	342 aa		4.29	□□□□□ -1.72
MSN1	YOL116W	GDB1	Q06625	1536 aa		4.29	□□□□□ -1.72
MSN1	YOL116W	PDR15	Q04182	1529 aa	Known RBP	4.28	□□□□□ -1.72
MSN1	YOL116W	PHR1	P05066	565 aa	Known RBP RIP-Chip data	4.28	□□□□□ -1.72	not detected
MSN1	YOL116W	DAL7	P21826	554 aa		4.28	□□□□□ -1.72
MSN1	YOL116W	HRR25	P29295	494 aa	Known RBP	4.28	□□□□□ -1.72
MSN1	YOL116W	NGG1	P32494	702 aa		4.28	□□□□□ -1.72
MSN1	YOL116W	YKL091C	P33324	310 aa	Known RBP	4.28	□□□□□ -1.72
MSN1	YOL116W	SAP190	P36123	1033 aa		4.28	□□□□□ -1.72
MSN1	YOL116W	YAP3	P38749	330 aa		4.28	□□□□□ -1.72
MSN1	YOL116W	CTF8	P38877	133 aa		4.28	□□□□□ -1.72
MSN1	YOL116W	YGR283C	P53336	341 aa	Predicted RBP	4.28	□□□□□ -1.72
MSN1	YOL116W	TRP4	P07285	380 aa	Predicted RBP	4.27	□□□□□ -1.73
MSN1	YOL116W	BET3	P36149	193 aa		4.27	□□□□□ -1.73
MSN1	YOL116W	KTR4	P38131	464 aa		4.27	□□□□□ -1.73
MSN1	YOL116W	OCA5	P38738	679 aa		4.27	□□□□□ -1.73
MSN1	YOL116W	YHR078W	P38799	552 aa		4.27	□□□□□ -1.73
MSN1	YOL116W	MSS4	P38994	779 aa		4.27	□□□□□ -1.73
MSN1	YOL116W	ZDS1	P50111	915 aa	Known RBP	4.27	□□□□□ -1.73
MSN1	YOL116W	SUN4	P53616	420 aa		4.27	□□□□□ -1.73
MSN1	YOL116W	PDR12	Q02785	1511 aa		4.26	□□□□□ -1.73
MSN1	YOL116W	PRC1	P00729	532 aa		4.26	□□□□□ -1.73
MSN1	YOL116W	EFT1	P32324	842 aa	Known RBP	4.26	□□□□□ -1.73
MSN1	YOL116W	PZF1	P39933	429 aa		4.26	□□□□□ -1.73
MSN1	YOL116W	OSW7	P43611	510 aa		4.26	□□□□□ -1.73
MSN1	YOL116W	MAK10	Q02197	733 aa		4.26	□□□□□ -1.73
MSN1	YOL116W	RPN4	Q03465	531 aa		4.26	□□□□□ -1.73
MSN1	YOL116W	TRM11	Q12463	433 aa		4.26	□□□□□ -1.73
MSN1	YOL116W	TRM3	Q07527	1436 aa		4.26	□□□□□ -1.73
MSN1	YOL116W	SEC21	P32074	935 aa	Known RBP	4.25	□□□□□ -1.73
MSN1	YOL116W	GYP8	P43570	497 aa		4.25	□□□□□ -1.73
MSN1	YOL116W	RTA1	P53047	317 aa		4.25	□□□□□ -1.73

Retrieved 100 of 5,963 RNA–protein pairs in 20.4 ms